Wall clock time and date at job start Tue Mar 9 2021 13:05:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46900 * 1 3 3 C 1.46896 * 111.00438 * 2 1 4 4 C 1.50697 * 109.47277 * 66.04431 * 3 2 1 5 5 O 1.21286 * 119.99998 * 0.02562 * 4 3 2 6 6 N 1.34775 * 120.00136 * 180.02562 * 4 3 2 7 7 C 1.46497 * 120.00126 * 180.02562 * 6 4 3 8 8 H 1.09002 * 112.84935 * 25.32833 * 7 6 4 9 9 C 1.53786 * 113.61643 * 156.52505 * 7 6 4 10 10 C 1.53782 * 87.07909 * 89.19525 * 9 7 6 11 11 H 1.08997 * 113.61784 * 270.88529 * 10 9 7 12 12 C 1.53002 * 113.61144 * 140.06321 * 10 9 7 13 13 C 1.47201 * 109.47286 * 175.00236 * 12 10 9 14 14 N 9.13436 * 80.40826 * 9.18223 * 2 1 3 15 15 C 1.53781 * 113.61305 * 254.13352 * 7 6 4 16 16 C 1.39679 * 110.99680 * 236.04001 * 2 1 3 17 17 C 1.38882 * 120.07682 * 243.95298 * 16 2 1 18 18 C 1.50700 * 120.03929 * 0.02562 * 17 16 2 19 19 O 1.42897 * 109.47134 * 284.99944 * 18 17 16 20 20 Si 1.86309 * 109.47277 * 164.99835 * 18 17 16 21 21 C 1.38124 * 119.92573 * 179.97438 * 17 16 2 22 22 C 1.38272 * 120.07493 * 0.02706 * 21 17 16 23 23 C 1.50701 * 119.92565 * 179.97438 * 22 21 17 24 24 F 1.39899 * 109.46810 * 90.00001 * 23 22 21 25 25 F 1.39895 * 109.46891 * 209.99856 * 23 22 21 26 26 F 1.39896 * 109.47104 * 329.99884 * 23 22 21 27 27 C 1.38302 * 120.14604 * 359.97399 * 22 21 17 28 28 C 1.38085 * 120.07775 * 359.74941 * 27 22 21 29 29 H 1.08998 * 109.47348 * 60.00157 * 1 2 3 30 30 H 1.09002 * 109.47434 * 180.02562 * 1 2 3 31 31 H 1.09003 * 109.46757 * 300.00278 * 1 2 3 32 32 H 1.09012 * 109.46484 * 306.04648 * 3 2 1 33 33 H 1.09001 * 109.47240 * 186.05364 * 3 2 1 34 34 H 0.97006 * 119.99816 * 359.97438 * 6 4 3 35 35 H 1.08993 * 113.61491 * 203.74894 * 9 7 6 36 36 H 1.09000 * 113.61395 * 334.56747 * 9 7 6 37 37 H 1.09000 * 109.47179 * 295.00397 * 12 10 9 38 38 H 1.09004 * 109.47260 * 55.00380 * 12 10 9 39 39 H 1.09001 * 113.61695 * 25.34675 * 15 7 6 40 40 H 1.08997 * 113.61223 * 156.25258 * 15 7 6 41 41 H 1.09002 * 109.47373 * 44.99818 * 18 17 16 42 42 H 0.96696 * 114.00388 * 59.99496 * 19 18 17 43 43 H 1.48497 * 110.00075 * 178.68191 * 20 18 17 44 44 H 1.48502 * 109.99445 * 300.00011 * 20 18 17 45 45 H 1.08000 * 119.96663 * 179.97438 * 21 17 16 46 46 H 1.08003 * 119.96024 * 180.02562 * 27 22 21 47 47 H 1.07999 * 120.04100 * 180.27816 * 28 27 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.6371 2.0471 1.2984 5 8 1.0055 1.4454 2.1411 6 7 2.0182 3.3201 1.5232 7 6 1.6702 3.9769 2.7857 8 1 1.5154 3.2708 3.6015 9 6 2.6023 5.1445 3.1501 10 6 1.6475 6.0514 2.3558 11 1 1.8994 6.1308 1.2983 12 6 1.4060 7.4119 3.0128 13 6 0.5811 8.2465 2.1241 14 7 -0.0530 8.8913 1.4372 15 6 0.5457 5.0169 2.6494 16 6 1.9695 -0.7285 -1.0816 17 6 2.7116 -1.8814 -0.8606 18 6 2.9777 -2.3490 0.5471 19 8 3.9737 -1.5169 1.1451 20 14 3.5800 -4.1117 0.5127 21 6 3.2046 -2.5996 -1.9325 22 6 2.9604 -2.1717 -3.2244 23 6 3.5004 -2.9576 -4.3914 24 9 2.5611 -3.9183 -4.7811 25 9 3.7524 -2.0911 -5.4605 26 9 4.6889 -3.5928 -4.0159 27 6 2.2219 -1.0240 -3.4480 28 6 1.7212 -0.3043 -2.3811 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3634 -1.0277 0.0005 31 1 -0.3633 0.5139 0.8900 32 1 1.5611 1.9273 -0.8310 33 1 3.0798 1.3443 -0.1084 34 1 2.5236 3.8013 0.8494 35 1 2.6283 5.3659 4.2170 36 1 3.5963 5.0634 2.7103 37 1 0.8888 7.2703 3.9618 38 1 2.3620 7.9046 3.1901 39 1 -0.1187 4.8337 1.8049 40 1 0.0084 5.2033 3.5793 41 1 2.0581 -2.2906 1.1294 42 1 3.7273 -0.5832 1.1963 43 1 3.8763 -4.5742 1.8923 44 1 2.5530 -4.9872 -0.1070 45 1 3.7821 -3.4961 -1.7613 46 1 2.0326 -0.6926 -4.4584 47 1 1.1407 0.5893 -2.5566 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534922_6406254.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:38 Heat of formation + Delta-G solvation = -116.735137 kcal Electronic energy + Delta-G solvation = -35553.219272 eV Core-core repulsion = 30289.223558 eV Total energy + Delta-G solvation = -5263.995714 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.145 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -51.18876 -48.69930 -48.66386 -41.83747 -41.06858 -39.63569 -37.70970 -37.60489 -37.35981 -34.58544 -33.01883 -32.16010 -31.21262 -29.22416 -27.63873 -26.98423 -26.58124 -25.25505 -24.24682 -23.32595 -22.17247 -21.54938 -20.18561 -19.55153 -19.50125 -19.43536 -18.77038 -18.34615 -18.14024 -17.52115 -16.98824 -16.94129 -16.48553 -16.27949 -16.02760 -15.78059 -15.71309 -15.53645 -15.51176 -15.28269 -15.10536 -15.08082 -14.87045 -14.80742 -14.72167 -14.60693 -14.51624 -14.22556 -14.02752 -13.97446 -13.72950 -13.59361 -13.32774 -13.19958 -13.07809 -12.97455 -12.84299 -12.61143 -12.28875 -12.21761 -11.83496 -11.44996 -11.41578 -11.20089 -11.07367 -10.88429 -10.23434 -10.10114 -9.99013 -9.68486 -4.96458 -0.37342 0.00984 1.31087 1.55816 1.59872 1.61359 1.83721 1.88553 1.92021 1.93717 2.17438 2.62669 2.73438 2.94890 3.09735 3.36287 3.49151 3.58477 3.63752 3.69532 3.75515 3.85162 3.94336 4.01223 4.02318 4.02810 4.08950 4.18116 4.28360 4.33967 4.42129 4.44593 4.48764 4.61950 4.71204 4.79544 4.86741 4.89943 4.94874 4.97121 4.98678 5.00227 5.12098 5.14445 5.23194 5.34025 5.37601 5.53961 5.72344 6.05928 6.58319 6.58545 6.68129 7.29895 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 N -0.505 5.505 3 C 0.036 3.964 4 C 0.516 3.484 5 O -0.561 6.561 6 N -0.702 5.702 7 C 0.110 3.890 8 H 0.083 0.917 9 C -0.118 4.118 10 C -0.099 4.099 11 H 0.098 0.902 12 C -0.016 4.016 13 C 0.234 3.766 14 N -0.519 5.519 15 C -0.154 4.154 16 C 0.129 3.871 17 C -0.099 4.099 18 C -0.065 4.065 19 O -0.540 6.540 20 Si 0.786 3.214 21 C -0.062 4.062 22 C -0.184 4.184 23 C 0.509 3.491 24 F -0.182 7.182 25 F -0.177 7.177 26 F -0.176 7.176 27 C -0.053 4.053 28 C -0.139 4.139 29 H 0.047 0.953 30 H 0.063 0.937 31 H 0.080 0.920 32 H 0.097 0.903 33 H 0.130 0.870 34 H 0.416 0.584 35 H 0.119 0.881 36 H 0.092 0.908 37 H 0.134 0.866 38 H 0.143 0.857 39 H 0.051 0.949 40 H 0.102 0.898 41 H 0.074 0.926 42 H 0.371 0.629 43 H -0.293 1.293 44 H -0.266 1.266 45 H 0.152 0.848 46 H 0.156 0.844 47 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.231 4.050 0.815 5.914 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 N -0.226 5.226 3 C -0.093 4.093 4 C 0.302 3.698 5 O -0.439 6.439 6 N -0.355 5.355 7 C 0.005 3.995 8 H 0.101 0.899 9 C -0.156 4.156 10 C -0.119 4.119 11 H 0.116 0.884 12 C -0.056 4.056 13 C -0.082 4.082 14 N -0.197 5.197 15 C -0.193 4.193 16 C 0.035 3.965 17 C -0.100 4.100 18 C -0.174 4.174 19 O -0.346 6.346 20 Si 0.688 3.312 21 C -0.080 4.080 22 C -0.186 4.186 23 C 0.455 3.545 24 F -0.164 7.164 25 F -0.158 7.158 26 F -0.157 7.157 27 C -0.072 4.072 28 C -0.159 4.159 29 H 0.066 0.934 30 H 0.082 0.918 31 H 0.098 0.902 32 H 0.115 0.885 33 H 0.148 0.852 34 H 0.253 0.747 35 H 0.137 0.863 36 H 0.110 0.890 37 H 0.152 0.848 38 H 0.161 0.839 39 H 0.070 0.930 40 H 0.120 0.880 41 H 0.091 0.909 42 H 0.220 0.780 43 H -0.220 1.220 44 H -0.192 1.192 45 H 0.169 0.831 46 H 0.173 0.827 47 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges 3.153 2.989 1.118 4.486 hybrid contribution -1.357 1.249 -0.627 1.948 sum 1.797 4.237 0.491 4.628 Atomic orbital electron populations 1.22559 0.84364 1.02773 1.02323 1.59172 1.09801 1.13379 1.40297 1.22217 1.03804 0.87864 0.95416 1.20692 0.78622 0.81718 0.88752 1.90722 1.40566 1.65051 1.47563 1.45562 1.57285 1.12910 1.19740 1.21863 0.97162 0.93934 0.86563 0.89902 1.23319 0.97939 0.91597 1.02709 1.22570 0.97194 0.91355 1.00786 0.88364 1.19732 0.99137 0.91447 0.95266 1.30121 0.92568 0.92471 0.93082 1.81307 1.12871 1.12731 1.12810 1.23656 0.96792 0.96133 1.02739 1.18854 0.94808 0.93484 0.89320 1.20176 0.98464 0.95536 0.95837 1.25282 0.95510 1.06712 0.89850 1.86689 1.42561 1.22906 1.82428 0.92642 0.86629 0.70386 0.81506 1.20825 0.97190 0.99434 0.90505 1.19978 1.06628 0.99632 0.92341 1.18337 0.75658 0.77786 0.82763 1.93236 1.65372 1.65696 1.92061 1.93200 1.94245 1.69501 1.58892 1.93210 1.48193 1.83153 1.91165 1.21095 0.93065 0.91692 1.01348 1.21857 1.00844 1.01675 0.91510 0.93419 0.91769 0.90156 0.88501 0.85248 0.74710 0.86311 0.88953 0.84842 0.83893 0.92997 0.88010 0.90864 0.78017 1.21978 1.19159 0.83120 0.82659 0.82456 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 8.94 127.69 1.14 1.11 16 2 N -0.50 1.46 3.19 -724.43 -2.31 -0.85 16 3 C 0.04 -0.29 4.91 85.56 0.42 0.13 16 4 C 0.52 -1.76 7.55 87.66 0.66 -1.10 16 5 O -0.56 -3.49 13.93 -3.05 -0.04 -3.53 16 6 N -0.70 6.31 5.26 -440.03 -2.32 3.99 16 7 C 0.11 -0.90 4.29 45.52 0.20 -0.71 16 8 H 0.08 -0.23 7.50 -2.39 -0.02 -0.25 16 9 C -0.12 1.73 7.38 31.12 0.23 1.96 16 10 C -0.10 1.32 3.50 -10.21 -0.04 1.28 16 11 H 0.10 -1.28 8.12 -2.39 -0.02 -1.30 16 12 C -0.02 0.23 5.54 28.79 0.16 0.39 16 13 C 0.23 -0.47 15.42 89.45 1.38 0.91 16 14 N -0.52 -4.10 18.54 20.00 0.37 -3.73 16 15 C -0.15 1.32 7.45 31.18 0.23 1.55 16 16 C 0.13 -0.38 4.61 38.21 0.18 -0.20 16 17 C -0.10 0.03 5.28 -19.74 -0.10 -0.08 16 18 C -0.06 -0.14 2.30 71.24 0.16 0.03 16 19 O -0.54 -1.63 12.65 -148.98 -1.89 -3.51 16 20 Si 0.79 1.42 30.17 68.60 2.07 3.49 16 21 C -0.06 0.04 8.01 22.25 0.18 0.22 16 22 C -0.18 0.20 5.46 -19.84 -0.11 0.09 16 23 C 0.51 0.52 3.36 71.24 0.24 0.76 16 24 F -0.18 -0.62 17.30 44.97 0.78 0.16 16 25 F -0.18 -0.25 16.46 44.97 0.74 0.49 16 26 F -0.18 -0.34 16.46 44.97 0.74 0.40 16 27 C -0.05 0.24 9.39 22.25 0.21 0.45 16 28 C -0.14 0.84 8.70 22.40 0.19 1.03 16 29 H 0.05 -0.24 7.46 -2.39 -0.02 -0.25 16 30 H 0.06 0.02 8.12 -2.39 -0.02 0.00 16 31 H 0.08 0.24 5.88 -2.39 -0.01 0.22 16 32 H 0.10 -1.21 7.49 -2.38 -0.02 -1.23 16 33 H 0.13 -1.52 8.06 -2.39 -0.02 -1.54 16 34 H 0.42 -6.17 8.71 -92.70 -0.81 -6.97 16 35 H 0.12 -2.02 8.10 -2.39 -0.02 -2.04 16 36 H 0.09 -1.48 8.14 -2.39 -0.02 -1.50 16 37 H 0.13 -2.30 7.86 -2.39 -0.02 -2.32 16 38 H 0.14 -2.67 8.14 -2.38 -0.02 -2.69 16 39 H 0.05 -0.21 8.14 -2.39 -0.02 -0.23 16 40 H 0.10 -0.96 7.91 -2.39 -0.02 -0.98 16 41 H 0.07 0.32 7.78 -2.39 -0.02 0.30 16 42 H 0.37 -0.15 8.38 -74.06 -0.62 -0.78 16 43 H -0.29 -2.55 7.11 99.48 0.71 -1.85 16 44 H -0.27 -1.18 7.11 99.48 0.71 -0.48 16 45 H 0.15 -0.43 4.67 -2.91 -0.01 -0.45 16 46 H 0.16 -1.18 7.60 -2.91 -0.02 -1.20 16 47 H 0.16 -1.68 7.16 -2.91 -0.02 -1.70 16 Total: 0.00 -25.64 405.48 3.15 -22.49 By element: Atomic # 1 Polarization: -26.91 SS G_CDS: -0.33 Total: -27.24 kcal Atomic # 6 Polarization: 2.49 SS G_CDS: 5.33 Total: 7.82 kcal Atomic # 7 Polarization: 3.67 SS G_CDS: -4.26 Total: -0.59 kcal Atomic # 8 Polarization: -5.11 SS G_CDS: -1.93 Total: -7.04 kcal Atomic # 9 Polarization: -1.20 SS G_CDS: 2.26 Total: 1.05 kcal Atomic # 14 Polarization: 1.42 SS G_CDS: 2.07 Total: 3.49 kcal Total: -25.64 3.15 -22.49 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_6406254.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.241 kcal (2) G-P(sol) polarization free energy of solvation -25.641 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.882 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.147 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.494 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.735 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds