Wall clock time and date at job start Tue Mar 9 2021 13:05:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35962 * 117.00173 * 2 1 4 4 C 1.39450 * 120.12498 * 179.97438 * 3 2 1 5 5 O 1.34771 * 133.23912 * 0.39140 * 4 3 2 6 6 C 1.34931 * 110.84001 * 180.09765 * 5 4 3 7 7 C 1.46996 * 125.13942 * 179.81338 * 6 5 4 8 8 O 1.21651 * 119.99854 * 179.69992 * 7 6 5 9 9 N 1.34776 * 120.00035 * 359.70433 * 7 6 5 10 10 C 1.46499 * 119.99999 * 179.97438 * 9 7 6 11 11 H 1.08993 * 112.84964 * 23.80229 * 10 9 7 12 12 C 1.53783 * 113.61210 * 154.99616 * 10 9 7 13 13 C 1.53786 * 87.08050 * 89.20097 * 12 10 9 14 14 H 1.09002 * 113.61357 * 270.88070 * 13 12 10 15 15 C 1.53003 * 113.61503 * 140.06140 * 13 12 10 16 16 C 1.47202 * 109.46984 * 176.52528 * 15 13 12 17 17 N 9.24715 * 132.37205 * 211.41189 * 2 1 3 18 18 C 1.53781 * 87.17350 * 25.47154 * 13 12 10 19 19 C 1.35810 * 109.71772 * 359.55727 * 6 5 4 20 20 C 1.40607 * 119.14030 * 180.02562 * 4 3 2 21 21 C 1.39783 * 120.11594 * 0.02562 * 20 4 3 22 22 C 1.50702 * 120.08881 * 179.97438 * 21 20 4 23 23 O 1.42901 * 109.47076 * 284.99038 * 22 21 20 24 24 Si 1.86305 * 109.46869 * 164.99719 * 22 21 20 25 25 C 1.36631 * 119.81573 * 359.97438 * 21 20 4 26 26 C 1.38262 * 120.11921 * 0.02710 * 3 2 1 27 27 H 1.08999 * 109.47208 * 60.00138 * 1 2 3 28 28 H 1.08999 * 109.47401 * 179.97438 * 1 2 3 29 29 H 1.08996 * 109.47212 * 299.99878 * 1 2 3 30 30 H 0.96999 * 119.99974 * 359.97438 * 9 7 6 31 31 H 1.08992 * 113.61796 * 334.64954 * 12 10 9 32 32 H 1.09005 * 113.68996 * 203.75566 * 12 10 9 33 33 H 1.08997 * 109.46971 * 296.52802 * 15 13 12 34 34 H 1.09004 * 109.46713 * 56.53041 * 15 13 12 35 35 H 1.08999 * 113.61567 * 89.07405 * 18 13 12 36 36 H 1.08998 * 113.61196 * 219.97759 * 18 13 12 37 37 H 1.08004 * 126.95163 * 180.28730 * 19 6 5 38 38 H 1.08994 * 109.47904 * 44.99513 * 22 21 20 39 39 H 0.96707 * 114.00254 * 300.00761 * 23 22 21 40 40 H 1.48499 * 109.99945 * 179.97438 * 24 22 21 41 41 H 1.48503 * 109.99975 * 301.31674 * 24 22 21 42 42 H 1.07996 * 119.75462 * 180.02562 * 25 21 20 43 43 H 1.07998 * 119.66065 * 359.97438 * 26 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4387 1.2874 0.0005 5 8 4.4140 0.3574 -0.0056 6 6 5.6317 0.9387 0.0004 7 6 6.9131 0.2185 0.0002 8 8 7.9595 0.8389 0.0005 9 7 6.9287 -1.1292 -0.0003 10 6 8.2058 -1.8470 -0.0011 11 1 9.0251 -1.2534 0.4042 12 6 8.1172 -3.2623 0.5940 13 6 7.7823 -3.7526 -0.8246 14 1 6.7160 -3.7401 -1.0505 15 6 8.4511 -5.0799 -1.1882 16 6 8.0050 -5.5040 -2.5254 17 7 7.6610 -5.8304 -3.5606 18 6 8.5372 -2.5190 -1.3471 19 6 5.4943 2.2898 0.0010 20 6 4.0554 2.5510 0.0011 21 6 3.2765 3.7117 0.0016 22 6 3.9381 5.0656 0.0028 23 8 4.4599 5.3397 1.3046 24 14 2.6866 6.3688 -0.4515 25 6 1.9136 3.6151 0.0011 26 6 1.2957 2.3726 0.0006 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3633 0.5138 0.8900 30 1 6.0943 -1.6239 -0.0002 31 1 7.2995 -3.3872 1.3036 32 1 9.0676 -3.6383 0.9728 33 1 9.5336 -4.9528 -1.1896 34 1 8.1751 -5.8384 -0.4556 35 1 9.6028 -2.6909 -1.4985 36 1 8.0582 -2.0443 -2.2034 37 1 6.2874 3.0231 0.0009 38 1 4.7508 5.0736 -0.7235 39 1 3.7908 5.3484 2.0028 40 1 3.3265 7.7088 -0.4533 41 1 2.1130 6.0775 -1.7899 42 1 1.3127 4.5125 0.0011 43 1 0.2174 2.3119 0.0006 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534922_6672420.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:45 Heat of formation + Delta-G solvation = -11.681999 kcal Electronic energy + Delta-G solvation = -28971.690450 eV Core-core repulsion = 24758.834212 eV Total energy + Delta-G solvation = -4212.856238 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.130 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -43.68939 -41.44727 -40.68506 -39.57810 -39.09717 -37.36232 -37.02178 -34.80394 -33.58379 -32.00432 -31.50070 -30.72363 -28.71870 -26.91780 -26.42855 -25.66606 -24.02862 -23.96349 -22.14417 -21.69990 -20.48357 -19.89535 -19.05847 -18.73805 -18.46262 -17.78865 -17.68630 -17.18353 -16.96695 -16.67965 -16.33741 -16.29044 -16.10756 -15.82116 -15.60030 -15.44898 -14.91069 -14.64083 -14.56437 -14.36914 -14.09966 -14.01539 -13.73265 -13.63437 -13.60549 -13.44981 -13.37599 -13.20607 -12.59082 -12.57445 -12.39802 -12.16287 -12.10192 -11.91580 -11.70234 -11.44708 -11.39279 -10.96159 -10.47442 -10.28263 -9.79316 -9.01019 -5.09528 -0.61381 0.09660 0.68511 1.20576 1.27616 1.60719 1.79017 1.83892 1.88207 1.94653 2.01627 2.02778 2.38639 2.88127 3.18881 3.25394 3.39910 3.42410 3.51030 3.60811 3.63027 3.68751 3.81035 3.84654 3.98170 4.06340 4.07347 4.07950 4.15852 4.32346 4.41244 4.42451 4.43959 4.44353 4.54386 4.55418 4.66390 4.80788 4.84950 4.86661 4.87938 4.95819 5.04401 5.20650 5.27422 5.37990 5.61166 6.12711 6.29316 6.54896 6.62583 6.89834 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.311 6.311 3 C 0.150 3.850 4 C 0.047 3.953 5 O -0.174 6.174 6 C -0.025 4.025 7 C 0.606 3.394 8 O -0.506 6.506 9 N -0.701 5.701 10 C 0.117 3.883 11 H 0.112 0.888 12 C -0.135 4.135 13 C -0.112 4.112 14 H 0.098 0.902 15 C -0.016 4.016 16 C 0.202 3.798 17 N -0.435 5.435 18 C -0.150 4.150 19 C -0.103 4.103 20 C -0.083 4.083 21 C -0.098 4.098 22 C -0.066 4.066 23 O -0.535 6.535 24 Si 0.686 3.314 25 C -0.088 4.088 26 C -0.178 4.178 27 H 0.060 0.940 28 H 0.105 0.895 29 H 0.061 0.939 30 H 0.409 0.591 31 H 0.081 0.919 32 H 0.107 0.893 33 H 0.112 0.888 34 H 0.113 0.887 35 H 0.101 0.899 36 H 0.074 0.926 37 H 0.174 0.826 38 H 0.114 0.886 39 H 0.379 0.621 40 H -0.252 1.252 41 H -0.255 1.255 42 H 0.141 0.859 43 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.976 -0.423 5.596 7.501 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.104 3.896 4 C -0.002 4.002 5 O -0.076 6.076 6 C -0.075 4.075 7 C 0.392 3.608 8 O -0.382 6.382 9 N -0.352 5.352 10 C 0.012 3.988 11 H 0.130 0.870 12 C -0.173 4.173 13 C -0.132 4.132 14 H 0.116 0.884 15 C -0.056 4.056 16 C -0.116 4.116 17 N -0.112 5.112 18 C -0.188 4.188 19 C -0.123 4.123 20 C -0.084 4.084 21 C -0.099 4.099 22 C -0.177 4.177 23 O -0.341 6.341 24 Si 0.587 3.413 25 C -0.105 4.105 26 C -0.197 4.197 27 H 0.079 0.921 28 H 0.124 0.876 29 H 0.080 0.920 30 H 0.245 0.755 31 H 0.100 0.900 32 H 0.125 0.875 33 H 0.130 0.870 34 H 0.131 0.869 35 H 0.119 0.881 36 H 0.093 0.907 37 H 0.192 0.808 38 H 0.131 0.869 39 H 0.226 0.774 40 H -0.177 1.177 41 H -0.180 1.180 42 H 0.158 0.842 43 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -4.347 -0.318 3.130 5.366 hybrid contribution -0.187 -0.453 0.103 0.501 sum -4.534 -0.771 3.233 5.622 Atomic orbital electron populations 1.23194 0.77271 1.04790 1.01820 1.86172 1.22196 1.25666 1.88371 1.17736 0.86488 0.85906 0.99464 1.18778 0.87460 0.86952 1.07001 1.84046 1.12649 1.34724 1.76142 1.21936 0.83877 0.92581 1.09139 1.16585 0.85429 0.82065 0.76768 1.90926 1.30307 1.67396 1.49598 1.45560 1.09830 1.05582 1.74212 1.21959 0.86513 0.92907 0.97426 0.86993 1.23380 1.04001 0.94081 0.95876 1.22654 1.00709 0.92561 0.97241 0.88358 1.19334 1.02114 0.98070 0.86099 1.29333 0.93740 0.93495 0.95054 1.81404 1.08818 1.08809 1.12147 1.23643 1.01678 0.95708 0.97813 1.22754 0.94798 0.94335 1.00437 1.19405 0.92631 0.92086 1.04255 1.19495 0.92919 0.94466 1.03038 1.25062 1.05483 0.97771 0.89338 1.86544 1.38146 1.93370 1.15996 0.95000 0.83023 0.77821 0.85462 1.20394 0.93092 0.97271 0.99757 1.20985 1.00445 0.90519 1.07709 0.92108 0.87639 0.91996 0.75535 0.89989 0.87513 0.86968 0.86864 0.88102 0.90682 0.80819 0.86868 0.77410 1.17672 1.17955 0.84177 0.83354 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 9.81 101.05 0.99 0.92 16 2 O -0.31 -0.34 10.50 -19.62 -0.21 -0.55 16 3 C 0.15 0.20 6.70 -39.12 -0.26 -0.06 16 4 C 0.05 0.13 7.35 -38.24 -0.28 -0.15 16 5 O -0.17 -0.51 10.28 2.66 0.03 -0.49 16 6 C -0.03 -0.07 7.07 -36.90 -0.26 -0.33 16 7 C 0.61 1.54 7.80 -12.71 -0.10 1.44 16 8 O -0.51 -2.73 16.42 5.23 0.09 -2.65 16 9 N -0.70 0.39 5.26 -54.09 -0.28 0.10 16 10 C 0.12 -0.24 4.33 -66.97 -0.29 -0.53 16 11 H 0.11 -0.10 7.46 -51.93 -0.39 -0.48 16 12 C -0.14 0.66 7.39 -25.92 -0.19 0.47 16 13 C -0.11 0.47 3.48 -89.80 -0.31 0.16 16 14 H 0.10 -0.36 8.13 -51.93 -0.42 -0.78 16 15 C -0.02 0.08 5.53 -29.52 -0.16 -0.09 16 16 C 0.20 0.06 15.43 -20.67 -0.32 -0.26 16 17 N -0.44 -1.96 18.56 42.26 0.78 -1.18 16 18 C -0.15 0.40 7.45 -25.78 -0.19 0.21 16 19 C -0.10 -0.29 10.68 -37.24 -0.40 -0.69 16 20 C -0.08 -0.20 6.16 -105.21 -0.65 -0.85 16 21 C -0.10 -0.04 5.26 -104.62 -0.55 -0.60 16 22 C -0.07 0.01 2.71 36.01 0.10 0.11 16 23 O -0.54 -0.14 12.88 -35.23 -0.45 -0.60 16 24 Si 0.69 -1.05 29.93 -169.99 -5.09 -6.14 16 25 C -0.09 0.12 8.62 -39.97 -0.34 -0.22 16 26 C -0.18 0.20 9.03 -39.38 -0.36 -0.15 16 27 H 0.06 -0.25 7.66 -51.93 -0.40 -0.65 16 28 H 0.11 -0.45 8.14 -51.93 -0.42 -0.87 16 29 H 0.06 -0.27 7.66 -51.93 -0.40 -0.67 16 30 H 0.41 -0.82 8.42 -40.82 -0.34 -1.16 16 31 H 0.08 -0.40 8.14 -51.93 -0.42 -0.82 16 32 H 0.11 -0.67 8.10 -51.93 -0.42 -1.09 16 33 H 0.11 -0.73 7.88 -51.93 -0.41 -1.14 16 34 H 0.11 -0.75 8.14 -51.93 -0.42 -1.17 16 35 H 0.10 -0.38 7.92 -51.93 -0.41 -0.79 16 36 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 37 H 0.17 0.40 8.06 -52.48 -0.42 -0.02 16 38 H 0.11 0.07 7.96 -51.93 -0.41 -0.34 16 39 H 0.38 -1.44 8.70 45.56 0.40 -1.04 16 40 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 41 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 42 H 0.14 -0.61 5.07 -52.49 -0.27 -0.88 16 43 H 0.15 -0.60 6.26 -52.49 -0.33 -0.92 16 LS Contribution 374.67 15.07 5.65 5.65 Total: 0.00 -11.50 374.67 -8.18 -19.68 By element: Atomic # 1 Polarization: -8.10 SS G_CDS: -5.11 Total: -13.21 kcal Atomic # 6 Polarization: 2.95 SS G_CDS: -3.58 Total: -0.63 kcal Atomic # 7 Polarization: -1.57 SS G_CDS: 0.50 Total: -1.08 kcal Atomic # 8 Polarization: -3.73 SS G_CDS: -0.55 Total: -4.28 kcal Atomic # 14 Polarization: -1.05 SS G_CDS: -5.09 Total: -6.14 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -11.50 -8.18 -19.68 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_6672420.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.000 kcal (2) G-P(sol) polarization free energy of solvation -11.504 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -3.503 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.179 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.682 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.682 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds