Wall clock time and date at job start Tue Mar 9 2021 13:05:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.33816 * 122.45009 * 2 1 4 4 C 1.50697 * 124.52011 * 0.05616 * 3 2 1 5 5 O 1.42895 * 109.47310 * 30.00317 * 4 3 2 6 6 Si 1.86305 * 109.46820 * 150.00430 * 4 3 2 7 7 S 1.70620 * 110.95390 * 179.74702 * 3 2 1 8 8 C 1.75840 * 91.56175 * 0.35516 * 7 3 2 9 9 C 1.46580 * 125.45527 * 179.91402 * 8 7 3 10 10 O 1.21703 * 119.99783 * 179.69549 * 9 8 7 11 11 N 1.34778 * 120.00164 * 359.69474 * 9 8 7 12 12 C 1.46498 * 119.99823 * 179.97438 * 11 9 8 13 13 H 1.08996 * 112.85504 * 336.19688 * 12 11 9 14 14 C 1.53789 * 113.69053 * 107.46252 * 12 11 9 15 15 C 1.53787 * 87.07916 * 89.12730 * 14 12 11 16 16 H 1.09003 * 113.68991 * 270.87343 * 15 14 12 17 17 C 1.52997 * 113.61418 * 139.98375 * 15 14 12 18 18 C 1.47194 * 109.47306 * 87.50061 * 17 15 14 19 19 N 9.88125 * 158.09331 * 253.29390 * 2 1 3 20 20 C 1.53780 * 87.08169 * 25.42984 * 15 14 12 21 21 C 1.36648 * 109.08056 * 359.64818 * 8 7 3 22 22 H 1.08995 * 109.46733 * 270.00342 * 1 2 3 23 23 H 1.08994 * 109.46772 * 30.00209 * 1 2 3 24 24 H 1.09000 * 109.46849 * 150.00266 * 1 2 3 25 25 H 1.09004 * 109.47301 * 269.99611 * 4 3 2 26 26 H 0.96698 * 114.00052 * 59.99915 * 5 4 3 27 27 H 1.48498 * 110.00282 * 58.67689 * 6 4 3 28 28 H 1.48497 * 109.99921 * 180.02562 * 6 4 3 29 29 H 0.96994 * 119.99837 * 359.97438 * 11 9 8 30 30 H 1.08998 * 113.61490 * 334.57910 * 14 12 11 31 31 H 1.08992 * 113.61318 * 203.67507 * 14 12 11 32 32 H 1.09002 * 109.47153 * 327.49917 * 17 15 14 33 33 H 1.09001 * 109.46832 * 207.50108 * 17 15 14 34 34 H 1.09004 * 113.61169 * 89.11732 * 20 15 14 35 35 H 1.09003 * 113.61760 * 220.01517 * 20 15 14 36 36 H 1.08001 * 123.34806 * 180.24225 * 21 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2251 1.1292 0.0000 4 6 1.6355 2.5161 0.0012 5 8 0.3760 2.4977 0.6759 6 14 2.7934 3.6822 0.8790 7 16 3.8970 0.7892 0.0070 8 6 3.5937 -0.9428 -0.0009 9 6 4.6231 -1.9863 -0.0014 10 8 4.3001 -3.1597 -0.0016 11 7 5.9273 -1.6464 -0.0018 12 6 6.9561 -2.6893 -0.0017 13 1 6.5993 -3.6360 0.4039 14 6 7.6907 -2.8328 -1.3453 15 6 8.6832 -1.7794 -0.8253 16 1 8.3916 -0.7537 -1.0513 17 6 10.1392 -2.0770 -1.1892 18 6 10.4417 -1.5038 -2.5107 19 7 10.6748 -1.0598 -3.5310 20 6 8.2980 -2.2309 0.5933 21 6 2.2446 -1.1601 -0.0005 22 1 -0.3632 0.0001 1.0276 23 1 -0.3633 0.8899 -0.5138 24 1 -0.3633 -0.8900 -0.5138 25 1 1.4926 2.8511 -1.0262 26 1 0.4276 2.2088 1.5973 27 1 4.1170 3.6862 0.2059 28 1 2.2232 5.0533 0.8876 29 1 6.1847 -0.7112 -0.0020 30 1 7.1053 -2.4963 -2.2010 31 1 8.1365 -3.8158 -1.4963 32 1 10.2936 -3.1556 -1.2170 33 1 10.7981 -1.6348 -0.4419 34 1 8.9100 -3.0495 0.9722 35 1 8.2030 -1.4087 1.3026 36 1 1.8019 -2.1452 -0.0009 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534922_6739946.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:48 Heat of formation + Delta-G solvation = 13.450514 kcal Electronic energy + Delta-G solvation = -20366.295336 eV Core-core repulsion = 17137.497837 eV Total energy + Delta-G solvation = -3228.797499 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.087 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -41.48708 -40.27222 -39.40475 -37.48282 -37.29586 -34.73996 -32.30368 -31.14603 -30.28481 -26.92781 -26.77850 -24.92043 -24.00781 -22.02592 -20.60898 -20.09879 -19.57648 -18.65869 -17.77300 -17.34455 -17.03397 -16.51753 -16.34384 -16.25556 -15.81127 -15.68767 -15.23785 -14.75246 -14.57625 -14.48847 -14.06364 -14.01334 -13.74506 -13.65948 -13.51686 -13.23175 -13.12853 -13.01161 -12.59625 -12.48839 -12.30997 -12.15719 -11.81955 -11.70062 -11.39915 -11.12378 -10.77123 -10.23570 -9.72274 -9.49007 -5.23641 -0.66647 0.23507 0.65571 1.03129 1.28831 1.41363 1.77780 1.78613 1.82656 1.91814 2.12668 2.86496 3.19314 3.24301 3.40457 3.49805 3.60078 3.67074 3.71905 4.05251 4.06458 4.20972 4.30968 4.38190 4.40246 4.52827 4.54517 4.54800 4.66122 4.77091 4.81158 4.86755 4.87784 4.96641 5.00610 5.35445 5.41784 5.42524 6.28725 6.33593 6.60376 7.04792 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C -0.091 4.091 3 C -0.235 4.235 4 C -0.028 4.028 5 O -0.529 6.529 6 Si 0.659 3.341 7 S 0.192 5.808 8 C -0.264 4.264 9 C 0.596 3.404 10 O -0.522 6.522 11 N -0.712 5.712 12 C 0.120 3.880 13 H 0.111 0.889 14 C -0.150 4.150 15 C -0.112 4.112 16 H 0.097 0.903 17 C -0.017 4.017 18 C 0.202 3.798 19 N -0.435 5.435 20 C -0.136 4.136 21 C -0.044 4.044 22 H 0.073 0.927 23 H 0.084 0.916 24 H 0.062 0.938 25 H 0.124 0.876 26 H 0.381 0.619 27 H -0.237 1.237 28 H -0.234 1.234 29 H 0.399 0.601 30 H 0.074 0.926 31 H 0.100 0.900 32 H 0.112 0.888 33 H 0.113 0.887 34 H 0.106 0.894 35 H 0.081 0.919 36 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.895 0.869 6.546 6.664 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.103 4.103 3 C -0.355 4.355 4 C -0.141 4.141 5 O -0.335 6.335 6 Si 0.558 3.442 7 S 0.460 5.540 8 C -0.384 4.384 9 C 0.383 3.617 10 O -0.399 6.399 11 N -0.363 5.363 12 C 0.015 3.985 13 H 0.129 0.871 14 C -0.189 4.189 15 C -0.132 4.132 16 H 0.115 0.885 17 C -0.057 4.057 18 C -0.116 4.116 19 N -0.112 5.112 20 C -0.174 4.174 21 C -0.078 4.078 22 H 0.091 0.909 23 H 0.103 0.897 24 H 0.081 0.919 25 H 0.141 0.859 26 H 0.229 0.771 27 H -0.162 1.162 28 H -0.157 1.157 29 H 0.233 0.767 30 H 0.092 0.908 31 H 0.118 0.882 32 H 0.130 0.870 33 H 0.131 0.869 34 H 0.124 0.876 35 H 0.099 0.901 36 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 2.651 2.530 4.381 5.712 hybrid contribution -1.394 -0.830 -0.254 1.642 sum 1.257 1.700 4.127 4.637 Atomic orbital electron populations 1.20648 0.88478 1.03405 1.02908 1.18728 0.98497 0.90461 1.02648 1.24472 0.98327 1.00978 1.11675 1.24470 0.92278 0.95287 1.02027 1.86534 1.27678 1.90020 1.29249 0.94833 0.78179 0.80820 0.90338 1.83021 1.03431 0.98330 1.69198 1.24543 0.97979 0.96979 1.18865 1.16919 0.81504 0.87433 0.75875 1.90865 1.81514 1.18157 1.49361 1.45523 1.05094 1.09759 1.75890 1.21844 0.87030 0.92459 0.97210 0.87108 1.23604 0.97493 0.99814 0.97996 1.22646 0.92710 1.00481 0.97329 0.88503 1.19337 0.97652 1.02116 0.86554 1.29261 0.93509 0.93814 0.95025 1.81331 1.08431 1.09231 1.12158 1.23395 0.95682 1.02554 0.95799 1.20752 0.90895 1.00198 0.95921 0.90857 0.89687 0.91894 0.85874 0.77087 1.16154 1.15698 0.76671 0.90760 0.88171 0.86960 0.86865 0.87564 0.90077 0.82662 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.10 8.67 36.01 0.31 0.41 16 2 C -0.09 0.01 5.75 -106.45 -0.61 -0.61 16 3 C -0.24 0.18 5.54 -35.86 -0.20 -0.01 16 4 C -0.03 0.04 2.76 36.00 0.10 0.14 16 5 O -0.53 0.91 9.86 -35.23 -0.35 0.57 16 6 Si 0.66 -1.51 31.31 -169.99 -5.32 -6.83 16 7 S 0.19 -0.23 19.77 -107.50 -2.13 -2.36 16 8 C -0.26 -0.24 6.45 -36.79 -0.24 -0.48 16 9 C 0.60 1.19 7.78 -12.90 -0.10 1.09 16 10 O -0.52 -2.91 16.44 5.19 0.09 -2.82 16 11 N -0.71 0.81 5.26 -54.35 -0.29 0.52 16 12 C 0.12 -0.27 4.32 -67.12 -0.29 -0.56 16 13 H 0.11 -0.09 7.46 -51.93 -0.39 -0.47 16 14 C -0.15 0.43 7.43 -25.91 -0.19 0.23 16 15 C -0.11 0.51 3.49 -89.81 -0.31 0.20 16 16 H 0.10 -0.40 8.12 -51.93 -0.42 -0.83 16 17 C -0.02 0.08 5.54 -29.52 -0.16 -0.08 16 18 C 0.20 -0.01 15.42 -20.73 -0.32 -0.33 16 19 N -0.43 -1.82 18.54 42.19 0.78 -1.03 16 20 C -0.14 0.71 7.39 -25.92 -0.19 0.52 16 21 C -0.04 -0.04 9.80 -40.44 -0.40 -0.44 16 22 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 23 H 0.08 -0.03 6.42 -51.93 -0.33 -0.36 16 24 H 0.06 -0.07 8.13 -51.93 -0.42 -0.49 16 25 H 0.12 -0.15 7.96 -51.93 -0.41 -0.57 16 26 H 0.38 -1.94 8.66 45.56 0.39 -1.55 16 27 H -0.24 0.15 7.09 56.52 0.40 0.55 16 28 H -0.23 -0.15 7.11 56.52 0.40 0.26 16 29 H 0.40 -1.23 7.82 -40.82 -0.32 -1.55 16 30 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.10 -0.39 7.90 -51.93 -0.41 -0.80 16 32 H 0.11 -0.75 7.84 -51.93 -0.41 -1.16 16 33 H 0.11 -0.79 8.14 -51.93 -0.42 -1.21 16 34 H 0.11 -0.70 8.10 -51.93 -0.42 -1.12 16 35 H 0.08 -0.45 8.14 -51.93 -0.42 -0.87 16 36 H 0.16 0.15 8.06 -52.49 -0.42 -0.27 16 LS Contribution 324.76 15.07 4.89 4.89 Total: 0.00 -9.10 324.76 -9.38 -18.47 By element: Atomic # 1 Polarization: -7.05 SS G_CDS: -4.45 Total: -11.50 kcal Atomic # 6 Polarization: 2.70 SS G_CDS: -2.60 Total: 0.09 kcal Atomic # 7 Polarization: -1.01 SS G_CDS: 0.50 Total: -0.51 kcal Atomic # 8 Polarization: -1.99 SS G_CDS: -0.26 Total: -2.25 kcal Atomic # 14 Polarization: -1.51 SS G_CDS: -5.32 Total: -6.83 kcal Atomic # 16 Polarization: -0.23 SS G_CDS: -2.13 Total: -2.36 kcal Total LS contribution 4.89 Total: 4.89 kcal Total: -9.10 -9.38 -18.47 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_6739946.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.923 kcal (2) G-P(sol) polarization free energy of solvation -9.098 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.826 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.375 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.473 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.451 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds