Wall clock time and date at job start Tue Mar 9 2021 13:05:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13608 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 C 1.52999 * 109.47251 * 328.19060 * 3 2 1 5 5 H 1.08994 * 112.91063 * 316.24986 * 4 3 2 6 6 C 1.53786 * 113.61034 * 185.00103 * 4 3 2 7 7 C 1.53784 * 87.07885 * 220.02282 * 6 4 3 8 8 H 1.08992 * 113.61619 * 140.06935 * 7 6 4 9 9 N 1.46504 * 113.61221 * 270.88723 * 7 6 4 10 10 C 1.34778 * 120.00295 * 205.00050 * 9 7 6 11 11 O 1.21637 * 119.99660 * 359.97438 * 10 9 7 12 12 C 1.47181 * 120.00406 * 179.97438 * 10 9 7 13 13 C 1.36014 * 123.46252 * 359.97438 * 12 10 9 14 14 S 1.70441 * 110.81867 * 179.97438 * 13 12 10 15 15 C 1.75510 * 92.44743 * 0.02562 * 14 13 12 16 16 C 1.50699 * 124.71282 * 179.97438 * 15 14 13 17 17 O 1.42907 * 109.46603 * 245.02776 * 16 15 14 18 18 Si 1.86298 * 109.47032 * 5.02079 * 16 15 14 19 19 C 1.32762 * 110.57067 * 0.24293 * 15 14 13 20 20 C 1.53779 * 113.61211 * 87.50458 * 4 3 2 21 21 H 1.09002 * 109.46705 * 208.18769 * 3 2 1 22 22 H 1.09005 * 109.47007 * 88.19381 * 3 2 1 23 23 H 1.08997 * 113.61143 * 105.47393 * 6 4 3 24 24 H 1.08995 * 113.69476 * 334.57642 * 6 4 3 25 25 H 0.96998 * 119.99996 * 24.99670 * 9 7 6 26 26 H 1.08000 * 124.58886 * 0.03474 * 13 12 10 27 27 H 1.08996 * 109.47117 * 125.02689 * 16 15 14 28 28 H 0.96697 * 114.00527 * 59.99993 * 17 16 15 29 29 H 1.48506 * 109.99834 * 58.68765 * 18 16 15 30 30 H 1.48502 * 110.00011 * 180.02562 * 18 16 15 31 31 H 1.08004 * 123.45820 * 179.75395 * 19 15 14 32 32 H 1.09001 * 113.61731 * 25.43314 * 20 4 3 33 33 H 1.08998 * 113.61337 * 254.52829 * 20 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1186 -1.2249 0.7603 5 1 2.5764 -1.4046 1.6886 6 6 4.6474 -1.2553 0.9241 7 6 4.5682 -2.7660 0.6476 8 1 5.3754 -3.1373 0.0163 9 7 4.3719 -3.5739 1.8539 10 6 4.7729 -4.8604 1.8761 11 8 5.2974 -5.3509 0.8943 12 6 4.5763 -5.6719 3.0881 13 6 3.9991 -5.1957 4.2240 14 16 3.9330 -6.4054 5.4229 15 6 4.7011 -7.5883 4.3783 16 6 5.0059 -9.0108 4.7714 17 8 6.4214 -9.2063 4.7922 18 14 4.3073 -9.3504 6.4647 19 6 4.9814 -7.0540 3.1957 20 6 3.2667 -2.4777 -0.1191 21 1 2.9709 0.9066 0.4854 22 1 2.9714 -0.0316 -1.0272 23 1 4.9834 -1.0130 1.9323 24 1 5.1816 -0.6981 0.1546 25 1 3.9534 -3.1828 2.6367 26 1 3.6315 -4.1879 4.3488 27 1 4.5556 -9.6917 4.0492 28 1 6.8887 -8.6320 5.4141 29 1 2.8402 -9.1198 6.4645 30 1 4.6017 -10.7500 6.8643 31 1 5.4603 -7.5981 2.3950 32 1 3.4221 -2.2545 -1.1746 33 1 2.4880 -3.2222 0.0469 There are 47 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 47 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534922_6894386.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:50 Heat of formation + Delta-G solvation = 14.946336 kcal Electronic energy + Delta-G solvation = -18419.598558 eV Core-core repulsion = 15346.403541 eV Total energy + Delta-G solvation = -3073.195016 eV No. of doubly occupied orbitals = 47 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 279.072 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -41.44379 -39.87265 -38.69513 -37.48715 -37.08492 -34.71574 -31.97187 -30.78112 -26.96492 -26.60674 -26.09099 -24.03124 -22.23394 -20.60714 -20.31837 -18.92463 -18.56966 -18.06023 -17.59581 -16.83193 -16.40527 -16.07792 -16.06048 -15.64887 -15.50082 -15.16145 -14.65318 -14.35631 -14.14842 -14.02403 -13.82154 -13.66927 -13.52738 -13.30653 -13.07705 -12.64426 -12.34963 -12.30780 -11.96300 -11.83260 -11.44982 -11.10735 -11.05498 -10.59065 -10.16346 -9.98656 -9.43449 -5.14854 -0.34165 0.38971 0.69455 0.81704 1.21882 1.60172 1.83422 1.88532 1.90044 2.09684 2.25082 3.09407 3.39558 3.55032 3.65620 3.72490 3.87269 3.93917 3.97635 4.00738 4.27464 4.40278 4.42573 4.68917 4.70508 4.78148 4.87483 4.93021 4.97761 5.00517 5.11039 5.16672 5.21320 5.28558 5.65529 6.47200 6.68317 6.69066 7.16037 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.519 5.519 2 C 0.233 3.767 3 C -0.015 4.015 4 C -0.099 4.099 5 H 0.098 0.902 6 C -0.114 4.114 7 C 0.103 3.897 8 H 0.085 0.915 9 N -0.694 5.694 10 C 0.576 3.424 11 O -0.584 6.584 12 C -0.185 4.185 13 C -0.189 4.189 14 S 0.252 5.748 15 C -0.250 4.250 16 C -0.038 4.038 17 O -0.552 6.552 18 Si 0.744 3.256 19 C -0.077 4.077 20 C -0.156 4.156 21 H 0.146 0.854 22 H 0.135 0.865 23 H 0.093 0.907 24 H 0.124 0.876 25 H 0.414 0.586 26 H 0.205 0.795 27 H 0.112 0.888 28 H 0.397 0.603 29 H -0.258 1.258 30 H -0.274 1.274 31 H 0.130 0.870 32 H 0.107 0.893 33 H 0.048 0.952 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.618 6.050 6.450 9.554 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.197 5.197 2 C -0.083 4.083 3 C -0.054 4.054 4 C -0.119 4.119 5 H 0.116 0.884 6 C -0.152 4.152 7 C -0.002 4.002 8 H 0.103 0.897 9 N -0.345 5.345 10 C 0.363 3.637 11 O -0.466 6.466 12 C -0.202 4.202 13 C -0.328 4.328 14 S 0.518 5.482 15 C -0.366 4.366 16 C -0.150 4.150 17 O -0.360 6.360 18 Si 0.645 3.355 19 C -0.107 4.107 20 C -0.195 4.195 21 H 0.164 0.836 22 H 0.153 0.847 23 H 0.112 0.888 24 H 0.143 0.857 25 H 0.252 0.748 26 H 0.222 0.778 27 H 0.130 0.870 28 H 0.247 0.753 29 H -0.183 1.183 30 H -0.199 1.199 31 H 0.148 0.852 32 H 0.125 0.875 33 H 0.067 0.933 Dipole moment (debyes) X Y Z Total from point charges 1.039 4.770 7.267 8.754 hybrid contribution 0.490 -0.220 -2.215 2.279 sum 1.529 4.550 5.052 6.969 Atomic orbital electron populations 1.81323 1.15886 1.11198 1.11321 1.30147 0.96171 0.90952 0.91010 1.19724 0.78210 1.01757 1.05704 1.22541 0.97318 0.92941 0.99095 0.88377 1.23335 0.94383 0.92212 1.05266 1.22001 0.98572 0.92799 0.86841 0.89706 1.45406 1.61608 1.10275 1.17256 1.17902 0.77109 0.82149 0.86518 1.90793 1.45647 1.72707 1.37427 1.20111 1.09425 0.95259 0.95451 1.26181 1.02491 1.06826 0.97268 1.82874 1.54504 0.97735 1.13072 1.24896 1.10485 1.02154 0.99109 1.24695 0.86966 0.91303 1.12020 1.86507 1.17013 1.64885 1.67632 0.94196 0.79738 0.84751 0.76778 1.20989 0.99163 0.93089 0.97413 1.23664 0.97169 0.97916 1.00728 0.83622 0.84690 0.88809 0.85748 0.74815 0.77780 0.87034 0.75265 1.18326 1.19924 0.85195 0.87481 0.93269 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.52 -4.59 18.54 20.01 0.37 -4.22 16 2 C 0.23 -0.25 15.42 89.44 1.38 1.13 16 3 C -0.01 0.19 5.54 28.79 0.16 0.35 16 4 C -0.10 1.15 3.49 -10.27 -0.04 1.11 16 5 H 0.10 -1.11 8.12 -2.39 -0.02 -1.13 16 6 C -0.11 1.49 7.39 31.12 0.23 1.72 16 7 C 0.10 -0.46 4.33 45.52 0.20 -0.27 16 8 H 0.08 0.06 7.46 -2.39 -0.02 0.05 16 9 N -0.69 2.15 5.23 -443.52 -2.32 -0.17 16 10 C 0.58 3.20 7.79 86.59 0.67 3.88 16 11 O -0.58 -8.98 16.40 -4.15 -0.07 -9.04 16 12 C -0.18 -0.40 5.98 -19.87 -0.12 -0.52 16 13 C -0.19 1.03 10.38 67.30 0.70 1.73 16 14 S 0.25 -1.50 20.20 -56.49 -1.14 -2.64 16 15 C -0.25 0.03 5.65 24.51 0.14 0.17 16 16 C -0.04 0.02 2.94 71.24 0.21 0.23 16 17 O -0.55 -0.42 12.88 -148.98 -1.92 -2.33 16 18 Si 0.74 -2.72 30.92 68.60 2.12 -0.60 16 19 C -0.08 -0.37 9.95 22.67 0.23 -0.15 16 20 C -0.16 0.90 7.43 31.12 0.23 1.13 16 21 H 0.15 -2.68 8.14 -2.39 -0.02 -2.70 16 22 H 0.14 -2.24 7.84 -2.38 -0.02 -2.26 16 23 H 0.09 -1.38 8.14 -2.39 -0.02 -1.40 16 24 H 0.12 -2.02 8.10 -2.39 -0.02 -2.04 16 25 H 0.41 -4.10 7.20 -92.71 -0.67 -4.76 16 26 H 0.21 -2.70 7.01 -2.91 -0.02 -2.72 16 27 H 0.11 0.14 7.96 -2.39 -0.02 0.12 16 28 H 0.40 -3.15 8.70 -74.06 -0.64 -3.80 16 29 H -0.26 0.08 7.11 99.48 0.71 0.78 16 30 H -0.27 -0.86 7.11 99.48 0.71 -0.15 16 31 H 0.13 1.18 8.06 -2.91 -0.02 1.16 16 32 H 0.11 -0.81 7.90 -2.39 -0.02 -0.83 16 33 H 0.05 -0.02 8.14 -2.39 -0.02 -0.04 16 Total: 0.00 -29.16 307.44 0.92 -28.24 By element: Atomic # 1 Polarization: -19.62 SS G_CDS: -0.11 Total: -19.73 kcal Atomic # 6 Polarization: 6.51 SS G_CDS: 3.99 Total: 10.50 kcal Atomic # 7 Polarization: -2.44 SS G_CDS: -1.95 Total: -4.39 kcal Atomic # 8 Polarization: -9.39 SS G_CDS: -1.99 Total: -11.38 kcal Atomic # 14 Polarization: -2.72 SS G_CDS: 2.12 Total: -0.60 kcal Atomic # 16 Polarization: -1.50 SS G_CDS: -1.14 Total: -2.64 kcal Total: -29.16 0.92 -28.24 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_6894386.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.186 kcal (2) G-P(sol) polarization free energy of solvation -29.159 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 14.026 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.920 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.239 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.946 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds