Wall clock time and date at job start Tue Mar 9 2021 13:05:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.47198 * 179.97438 * 2 1 4 4 C 1.53009 * 109.46971 * 93.06549 * 3 2 1 5 5 H 1.08993 * 112.90596 * 316.25384 * 4 3 2 6 6 C 1.53777 * 113.61120 * 184.99661 * 4 3 2 7 7 C 1.53780 * 87.08314 * 220.02130 * 6 4 3 8 8 H 1.08997 * 113.61610 * 140.06468 * 7 6 4 9 9 N 1.46508 * 113.61438 * 270.89088 * 7 6 4 10 10 C 1.34779 * 119.99706 * 204.99820 * 9 7 6 11 11 O 1.21593 * 119.99950 * 359.97438 * 10 9 7 12 12 C 1.47519 * 119.99911 * 179.97438 * 10 9 7 13 13 C 1.36593 * 125.77164 * 179.97438 * 12 10 9 14 14 N 1.34809 * 106.84047 * 180.02562 * 13 12 10 15 15 C 1.46504 * 126.59651 * 179.97438 * 14 13 12 16 16 C 1.53002 * 109.47167 * 124.99811 * 15 14 13 17 17 O 1.42907 * 109.46944 * 180.02562 * 16 15 14 18 18 C 1.35919 * 116.99716 * 180.02562 * 17 16 15 19 19 C 1.38667 * 120.06103 * 359.97438 * 18 17 16 20 20 C 1.38194 * 119.95739 * 180.02562 * 19 18 17 21 21 C 1.38235 * 120.07923 * 0.02562 * 20 19 18 22 22 C 1.50699 * 119.94415 * 179.97438 * 21 20 19 23 23 O 1.42892 * 109.47249 * 300.00129 * 22 21 20 24 24 Si 1.86298 * 109.47032 * 179.97438 * 22 21 20 25 25 C 1.38298 * 120.11569 * 0.23097 * 21 20 19 26 26 C 1.38211 * 120.04147 * 359.49430 * 25 21 20 27 27 Cl 1.73601 * 120.03834 * 180.22671 * 26 25 21 28 28 N 1.40208 * 106.81091 * 0.22946 * 14 13 12 29 29 N 1.28763 * 108.36725 * 359.61173 * 28 14 13 30 30 C 1.53779 * 113.61298 * 87.50203 * 4 3 2 31 31 H 1.08997 * 109.47108 * 333.07300 * 3 2 1 32 32 H 1.08998 * 109.47290 * 213.06424 * 3 2 1 33 33 H 1.09008 * 113.61081 * 105.47573 * 6 4 3 34 34 H 1.08997 * 113.62116 * 334.57117 * 6 4 3 35 35 H 0.96999 * 120.00251 * 24.99560 * 9 7 6 36 36 H 1.07997 * 126.58329 * 0.03902 * 13 12 10 37 37 H 1.08997 * 109.46961 * 5.00022 * 15 14 13 38 38 H 1.09003 * 109.47068 * 245.00189 * 15 14 13 39 39 H 1.09006 * 109.46988 * 60.00803 * 16 15 14 40 40 H 1.08991 * 109.47099 * 300.00133 * 16 15 14 41 41 H 1.07994 * 120.02267 * 359.97438 * 19 18 17 42 42 H 1.08004 * 119.96112 * 179.97438 * 20 19 18 43 43 H 1.09004 * 109.46453 * 60.00198 * 22 21 20 44 44 H 0.96703 * 114.00176 * 299.99748 * 23 22 21 45 45 H 1.48506 * 109.99834 * 58.68765 * 24 22 21 46 46 H 1.48502 * 110.00011 * 180.02562 * 24 22 21 47 47 H 1.08004 * 119.97703 * 179.72225 * 25 21 20 48 48 H 1.09002 * 113.61473 * 25.42973 * 30 4 3 49 49 H 1.08998 * 113.61914 * 254.53231 * 30 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1179 0.0780 -1.4405 5 1 2.5758 -0.5811 -2.1184 6 6 4.6467 -0.0378 -1.5598 7 6 4.5663 1.0527 -2.6411 8 1 5.3729 1.7836 -2.5850 9 7 4.3698 0.5248 -3.9935 10 6 4.7698 1.2426 -5.0618 11 8 5.2934 2.3285 -4.9030 12 6 4.5725 0.7109 -6.4236 13 6 4.9307 1.3355 -7.5843 14 7 4.5761 0.5160 -8.5943 15 6 4.7618 0.7636 -10.0263 16 6 5.5385 -0.3986 -10.6483 17 8 5.7201 -0.1567 -12.0450 18 6 6.3956 -1.1007 -12.7520 19 6 6.8740 -2.2356 -12.1148 20 6 7.5611 -3.1939 -12.8356 21 6 7.7724 -3.0221 -14.1908 22 6 8.5225 -4.0687 -14.9738 23 8 9.8376 -4.2155 -14.4344 24 14 8.6372 -3.5458 -16.7582 25 6 7.3013 -1.8890 -14.8285 26 6 6.6086 -0.9302 -14.1135 27 17 6.0121 0.4894 -14.9152 28 7 3.9900 -0.6163 -8.0110 29 7 4.0093 -0.4698 -6.7319 30 6 3.2647 1.5159 -1.9656 31 1 2.9717 -0.9154 0.4654 32 1 2.9710 0.8620 0.5607 33 1 4.9832 -1.0033 -1.9376 34 1 5.1798 0.2758 -0.6622 35 1 3.9518 -0.3413 -4.1201 36 1 5.4069 2.3005 -7.6755 37 1 5.3201 1.6894 -10.1654 38 1 3.7885 0.8502 -10.5093 39 1 4.9801 -1.3244 -10.5092 40 1 6.5117 -0.4851 -10.1654 41 1 6.7106 -2.3702 -11.0558 42 1 7.9341 -4.0776 -12.3393 43 1 7.9943 -5.0199 -14.9075 44 1 10.3662 -3.4062 -14.4608 45 1 9.3270 -2.2346 -16.8598 46 1 9.3743 -4.5700 -17.5412 47 1 7.4716 -1.7549 -15.8865 48 1 3.4199 2.2543 -1.1790 49 1 2.4856 1.8049 -2.6709 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534922_7143556.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:52 Heat of formation + Delta-G solvation = 73.824246 kcal Electronic energy + Delta-G solvation = -34768.567602 eV Core-core repulsion = 29727.184862 eV Total energy + Delta-G solvation = -5041.382740 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.124 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -43.37254 -41.53396 -41.15408 -39.53723 -39.39826 -37.82271 -37.46328 -37.15950 -36.17376 -34.58010 -32.52523 -32.19067 -32.01195 -31.10650 -30.38156 -26.76345 -26.56910 -25.81297 -25.47565 -24.06208 -23.72030 -22.87250 -22.45952 -21.64543 -20.19691 -19.83973 -19.16325 -18.53615 -18.35029 -17.85590 -17.52245 -17.21498 -16.97855 -16.95659 -16.60918 -16.26487 -16.07039 -16.02165 -15.83471 -15.67999 -15.44410 -15.39606 -15.28688 -14.93811 -14.82255 -14.44407 -14.34337 -14.00809 -13.82253 -13.74110 -13.63227 -13.40942 -13.29949 -13.17756 -13.05747 -12.64234 -12.58423 -12.43058 -12.36911 -12.32621 -11.99045 -11.90061 -11.85105 -11.78978 -11.50452 -11.41927 -11.28763 -11.07156 -10.66548 -10.51338 -10.07273 -10.01442 -9.34561 -4.95212 -0.02058 0.00697 0.02888 0.52306 0.70926 1.07721 1.27187 1.56490 1.84688 1.89699 1.92868 1.95276 2.06816 2.16135 2.36716 3.09162 3.11639 3.19975 3.38269 3.46494 3.50629 3.58168 3.67189 3.74870 3.76216 3.77203 3.86563 3.95165 3.96853 4.01447 4.04030 4.06740 4.28331 4.41086 4.43779 4.45262 4.48345 4.63616 4.64488 4.73223 4.77134 4.80554 4.91468 4.97351 5.00216 5.00646 5.15667 5.22563 5.23330 5.27395 5.30515 5.42190 5.66681 5.99176 6.36710 6.46092 6.69578 6.79043 7.09343 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.520 5.520 2 C 0.233 3.767 3 C -0.014 4.014 4 C -0.105 4.105 5 H 0.089 0.911 6 C -0.117 4.117 7 C 0.105 3.895 8 H 0.098 0.902 9 N -0.693 5.693 10 C 0.608 3.392 11 O -0.565 6.565 12 C -0.124 4.124 13 C 0.118 3.882 14 N -0.351 5.351 15 C 0.123 3.877 16 C 0.048 3.952 17 O -0.304 6.304 18 C 0.138 3.862 19 C -0.194 4.194 20 C -0.048 4.048 21 C -0.140 4.140 22 C -0.069 4.069 23 O -0.545 6.545 24 Si 0.746 3.254 25 C -0.073 4.073 26 C -0.077 4.077 27 Cl -0.057 7.057 28 N -0.083 5.083 29 N -0.216 5.216 30 C -0.153 4.153 31 H 0.144 0.856 32 H 0.140 0.860 33 H 0.086 0.914 34 H 0.130 0.870 35 H 0.414 0.586 36 H 0.238 0.762 37 H 0.150 0.850 38 H 0.123 0.877 39 H 0.081 0.919 40 H 0.081 0.919 41 H 0.153 0.847 42 H 0.147 0.853 43 H 0.133 0.867 44 H 0.387 0.613 45 H -0.282 1.282 46 H -0.299 1.299 47 H 0.153 0.847 48 H 0.114 0.886 49 H 0.049 0.951 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.096 -0.529 0.119 5.125 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.198 5.198 2 C -0.083 4.083 3 C -0.053 4.053 4 C -0.124 4.124 5 H 0.107 0.893 6 C -0.154 4.154 7 C 0.001 3.999 8 H 0.116 0.884 9 N -0.342 5.342 10 C 0.393 3.607 11 O -0.443 6.443 12 C -0.264 4.264 13 C -0.039 4.039 14 N -0.136 5.136 15 C 0.003 3.997 16 C -0.029 4.029 17 O -0.217 6.217 18 C 0.091 3.909 19 C -0.213 4.213 20 C -0.066 4.066 21 C -0.141 4.141 22 C -0.179 4.179 23 O -0.353 6.353 24 Si 0.652 3.348 25 C -0.091 4.091 26 C -0.104 4.104 27 Cl -0.028 7.028 28 N -0.064 5.064 29 N -0.090 5.090 30 C -0.191 4.191 31 H 0.161 0.839 32 H 0.158 0.842 33 H 0.104 0.896 34 H 0.148 0.852 35 H 0.251 0.749 36 H 0.254 0.746 37 H 0.168 0.832 38 H 0.141 0.859 39 H 0.099 0.901 40 H 0.100 0.900 41 H 0.171 0.829 42 H 0.164 0.836 43 H 0.151 0.849 44 H 0.236 0.764 45 H -0.208 1.208 46 H -0.227 1.227 47 H 0.170 0.830 48 H 0.132 0.868 49 H 0.067 0.933 Dipole moment (debyes) X Y Z Total from point charges 3.281 -1.203 -0.775 3.579 hybrid contribution 1.190 0.919 0.427 1.563 sum 4.471 -0.284 -0.348 4.493 Atomic orbital electron populations 1.81312 1.15925 1.11678 1.10914 1.30173 0.96216 0.90854 0.91049 1.19736 0.78160 1.08750 0.98692 1.22548 0.97452 0.97380 0.95067 0.89289 1.23354 0.94296 0.98943 0.98845 1.22053 0.98897 0.98515 0.80479 0.88388 1.45481 1.60914 1.22672 1.05171 1.16840 0.77367 0.83650 0.82857 1.90818 1.45577 1.21755 1.86196 1.21522 1.13616 0.95349 0.95910 1.23922 0.95838 0.98533 0.85622 1.50347 1.40273 1.14416 1.08561 1.21921 1.04886 1.00245 0.72661 1.22957 1.01502 0.99384 0.79016 1.85996 1.70837 1.43317 1.21528 1.18685 0.93229 0.89150 0.89791 1.21460 1.03664 0.94275 1.01866 1.21110 0.93950 0.98517 0.93050 1.20181 1.02399 0.96223 0.95271 1.25018 0.83820 1.02144 1.06894 1.86584 1.25213 1.40145 1.83365 0.94253 0.89949 0.76373 0.74238 1.20915 0.96023 0.91877 1.00294 1.20203 1.06583 0.93149 0.90471 1.98391 1.87019 1.38281 1.79140 1.81994 1.18238 1.05757 1.00380 1.74615 1.11972 1.15388 1.07013 1.23656 0.97118 0.97603 1.00750 0.83863 0.84207 0.89550 0.85216 0.74926 0.74602 0.83222 0.85917 0.90077 0.90037 0.82932 0.83572 0.84926 0.76377 1.20808 1.22662 0.82986 0.86801 0.93254 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.52 -5.32 18.54 20.01 0.37 -4.95 16 2 C 0.23 0.08 15.42 89.44 1.38 1.46 16 3 C -0.01 0.17 5.54 28.79 0.16 0.32 16 4 C -0.10 1.02 3.49 -10.27 -0.04 0.98 16 5 H 0.09 -0.65 8.12 -2.39 -0.02 -0.67 16 6 C -0.12 1.37 7.39 31.12 0.23 1.60 16 7 C 0.11 -0.51 4.32 45.52 0.20 -0.31 16 8 H 0.10 -0.21 7.46 -2.39 -0.02 -0.22 16 9 N -0.69 0.93 5.26 -443.20 -2.33 -1.40 16 10 C 0.61 2.08 7.82 86.69 0.68 2.76 16 11 O -0.57 -4.91 16.46 -4.01 -0.07 -4.97 16 12 C -0.12 -0.22 6.99 40.81 0.29 0.07 16 13 C 0.12 -0.44 11.27 83.85 0.95 0.50 16 14 N -0.35 1.42 3.69 -347.10 -1.28 0.14 16 15 C 0.12 -1.19 6.91 86.38 0.60 -0.60 16 16 C 0.05 -0.34 4.95 71.98 0.36 0.01 16 17 O -0.30 0.83 9.60 -92.64 -0.89 -0.06 16 18 C 0.14 -0.13 6.68 22.52 0.15 0.02 16 19 C -0.19 0.63 9.04 22.36 0.20 0.83 16 20 C -0.05 0.15 9.60 22.26 0.21 0.37 16 21 C -0.14 0.40 5.39 -19.85 -0.11 0.29 16 22 C -0.07 0.24 2.82 71.24 0.20 0.44 16 23 O -0.54 0.28 12.77 -148.98 -1.90 -1.62 16 24 Si 0.75 -2.35 29.79 68.60 2.04 -0.31 16 25 C -0.07 0.14 8.45 22.28 0.19 0.33 16 26 C -0.08 -0.02 6.33 22.41 0.14 0.12 16 27 Cl -0.06 -0.08 28.51 -2.72 -0.08 -0.16 16 28 N -0.08 -0.22 13.65 37.02 0.51 0.29 16 29 N -0.22 -0.84 12.04 -50.00 -0.60 -1.44 16 30 C -0.15 0.90 7.43 31.12 0.23 1.13 16 31 H 0.14 -2.41 8.14 -2.39 -0.02 -2.43 16 32 H 0.14 -2.30 7.84 -2.39 -0.02 -2.32 16 33 H 0.09 -1.02 8.14 -2.38 -0.02 -1.04 16 34 H 0.13 -2.10 8.10 -2.39 -0.02 -2.12 16 35 H 0.41 -1.36 8.39 -92.71 -0.78 -2.14 16 36 H 0.24 -2.46 8.06 -2.91 -0.02 -2.49 16 37 H 0.15 -2.25 8.08 -2.39 -0.02 -2.27 16 38 H 0.12 -1.28 8.14 -2.39 -0.02 -1.30 16 39 H 0.08 -0.49 7.66 -2.38 -0.02 -0.51 16 40 H 0.08 -0.68 7.66 -2.39 -0.02 -0.70 16 41 H 0.15 -0.99 6.30 -2.91 -0.02 -1.01 16 42 H 0.15 -0.74 8.06 -2.91 -0.02 -0.76 16 43 H 0.13 -0.74 7.96 -2.38 -0.02 -0.75 16 44 H 0.39 -2.22 8.70 -74.06 -0.64 -2.87 16 45 H -0.28 -0.26 7.11 99.48 0.71 0.45 16 46 H -0.30 -1.38 7.11 99.48 0.71 -0.67 16 47 H 0.15 -0.68 4.87 -2.91 -0.01 -0.70 16 48 H 0.11 -1.02 7.90 -2.39 -0.02 -1.04 16 49 H 0.05 -0.02 8.14 -2.39 -0.02 -0.04 16 Total: 0.00 -31.22 442.07 1.45 -29.77 By element: Atomic # 1 Polarization: -25.28 SS G_CDS: -0.33 Total: -25.61 kcal Atomic # 6 Polarization: 4.32 SS G_CDS: 6.01 Total: 10.33 kcal Atomic # 7 Polarization: -4.03 SS G_CDS: -3.34 Total: -7.37 kcal Atomic # 8 Polarization: -3.79 SS G_CDS: -2.86 Total: -6.65 kcal Atomic # 14 Polarization: -2.35 SS G_CDS: 2.04 Total: -0.31 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -0.08 Total: -0.16 kcal Total: -31.22 1.45 -29.77 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_7143556.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 103.592 kcal (2) G-P(sol) polarization free energy of solvation -31.217 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 72.375 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.449 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.768 kcal (6) G-S(sol) free energy of system = (1) + (5) 73.824 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds