Wall clock time and date at job start Tue Mar 9 2021 13:06:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13598 * 1 3 3 C 1.47205 * 179.97438 * 2 1 4 4 C 1.52990 * 109.47125 * 116.63204 * 3 2 1 5 5 H 1.09000 * 112.90908 * 43.75238 * 4 3 2 6 6 C 1.54049 * 113.70090 * 272.42291 * 4 3 2 7 7 C 1.53781 * 87.08031 * 220.05426 * 6 4 3 8 8 H 1.08998 * 113.61680 * 139.97346 * 7 6 4 9 9 N 1.46505 * 113.61146 * 270.88055 * 7 6 4 10 10 C 1.34776 * 119.99597 * 252.49455 * 9 7 6 11 11 O 1.21275 * 120.00338 * 0.02562 * 10 9 7 12 12 C 1.50705 * 119.99715 * 180.02562 * 10 9 7 13 13 N 1.46499 * 109.46962 * 179.97438 * 12 10 9 14 14 C 1.36827 * 125.06370 * 264.69348 * 13 12 10 15 15 C 1.34238 * 109.93777 * 179.81465 * 14 13 12 16 16 C 1.50703 * 126.49700 * 180.16736 * 15 14 13 17 17 O 1.42900 * 109.46984 * 105.32231 * 16 15 14 18 18 Si 1.86292 * 109.47488 * 345.31794 * 16 15 14 19 19 C 1.46489 * 106.99988 * 0.43657 * 15 14 13 20 20 C 1.39591 * 134.03506 * 179.76098 * 19 15 14 21 21 C 1.36665 * 119.76410 * 179.97438 * 20 19 15 22 22 C 1.38784 * 120.52617 * 359.97438 * 21 20 19 23 23 C 1.37796 * 120.66735 * 0.02562 * 22 21 20 24 24 C 1.37697 * 125.06003 * 84.99642 * 13 12 10 25 25 C 1.53781 * 87.08070 * 25.42738 * 7 6 4 26 26 H 1.09007 * 109.46719 * 356.63554 * 3 2 1 27 27 H 1.08994 * 109.46928 * 236.63836 * 3 2 1 28 28 H 1.09005 * 113.62125 * 105.50470 * 6 4 3 29 29 H 1.09003 * 113.61268 * 334.60257 * 6 4 3 30 30 H 0.96995 * 120.00170 * 72.49954 * 9 7 6 31 31 H 1.09000 * 109.46532 * 299.99611 * 12 10 9 32 32 H 1.08993 * 109.47264 * 60.00029 * 12 10 9 33 33 H 1.08003 * 125.03055 * 359.96390 * 14 13 12 34 34 H 1.09005 * 109.47108 * 225.31776 * 16 15 14 35 35 H 0.96701 * 113.99993 * 299.99610 * 17 16 15 36 36 H 1.48500 * 110.00307 * 180.02562 * 18 16 15 37 37 H 1.48507 * 109.99982 * 301.32030 * 18 16 15 38 38 H 1.08005 * 120.11589 * 359.97438 * 20 19 15 39 39 H 1.07999 * 119.73410 * 180.02562 * 21 20 19 40 40 H 1.08001 * 119.66838 * 180.02562 * 22 21 20 41 41 H 1.07998 * 120.10720 * 179.97438 * 23 22 21 42 42 H 1.09002 * 113.61445 * 89.11830 * 25 7 6 43 43 H 1.09002 * 113.61408 * 219.93560 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1177 0.6475 -1.2894 5 1 2.5750 1.5556 -1.5518 6 6 3.2683 -0.3416 -2.4607 7 6 4.5690 0.3983 -2.8153 8 1 5.3767 -0.2636 -3.1277 9 7 4.3717 1.5274 -3.7277 10 6 4.7739 1.4352 -5.0107 11 8 5.2986 0.4174 -5.4101 12 6 4.5715 2.5969 -5.9492 13 7 5.0895 2.2497 -7.2748 14 6 6.3393 2.5610 -7.7366 15 6 6.4949 2.0947 -8.9858 16 6 7.7263 2.2261 -9.8447 17 8 8.4027 0.9687 -9.9030 18 14 8.8612 3.5084 -9.1111 19 6 5.2386 1.4397 -9.3581 20 6 4.7899 0.7822 -10.5048 21 6 3.5255 0.2646 -10.5391 22 6 2.6837 0.3869 -9.4425 23 6 3.1064 1.0320 -8.3006 24 6 4.3890 1.5667 -8.2438 25 6 4.6464 0.8086 -1.3352 26 1 2.9718 -1.0252 0.0603 27 1 2.9711 0.5659 0.8583 28 1 2.4901 -0.2439 -3.2177 29 1 3.4250 -1.3728 -2.1441 30 1 3.9517 2.3414 -3.4084 31 1 3.5078 2.8237 -6.0222 32 1 5.1036 3.4685 -5.5684 33 1 7.0903 3.0997 -7.1779 34 1 7.4368 2.5300 -10.8507 35 1 8.6898 0.6362 -9.0416 36 1 10.0792 3.6479 -9.9492 37 1 8.1588 4.8134 -9.0155 38 1 5.4396 0.6829 -11.3618 39 1 3.1790 -0.2444 -11.4263 40 1 1.6874 -0.0277 -9.4845 41 1 2.4436 1.1224 -7.4526 42 1 5.1799 0.0919 -0.7108 43 1 4.9821 1.8344 -1.1835 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534922_9818708.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:00 Heat of formation + Delta-G solvation = 56.954197 kcal Electronic energy + Delta-G solvation = -26702.810411 eV Core-core repulsion = 22909.331315 eV Total energy + Delta-G solvation = -3793.479095 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.142 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.50954 -41.42569 -39.72712 -37.98950 -37.57368 -37.40218 -34.85920 -33.99732 -31.73014 -31.06453 -30.12606 -28.89132 -26.99322 -25.90123 -24.60230 -23.62029 -22.73491 -21.91231 -20.64449 -20.51263 -19.07894 -18.46276 -18.39399 -17.67910 -17.34206 -16.91627 -16.49933 -16.36823 -16.24130 -15.94983 -15.85999 -15.42756 -15.25885 -14.92088 -14.65253 -14.58474 -14.34787 -14.11675 -13.99867 -13.92199 -13.70929 -13.60074 -13.38274 -13.21850 -12.65035 -12.60534 -12.45969 -12.24601 -12.11677 -12.01726 -11.77187 -11.68245 -11.46485 -11.15277 -10.43396 -10.29566 -10.21405 -9.03432 -8.53809 -5.02141 0.26852 0.78307 1.32563 1.37340 1.38938 1.66735 1.72066 1.73719 1.78427 2.02995 2.05338 2.80794 3.10315 3.16874 3.33396 3.38549 3.44665 3.59860 3.60896 3.65098 3.75399 3.78865 3.84909 3.98751 4.07626 4.24979 4.30675 4.34339 4.36241 4.46086 4.48096 4.57132 4.60604 4.70555 4.77495 4.78438 4.79172 4.88808 4.89574 4.97912 5.24560 5.33454 5.63850 5.79848 5.85271 5.89118 6.10932 6.28893 6.35260 6.55600 6.77972 6.95155 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.434 5.434 2 C 0.202 3.798 3 C -0.017 4.017 4 C -0.110 4.110 5 H 0.097 0.903 6 C -0.150 4.150 7 C 0.120 3.880 8 H 0.108 0.892 9 N -0.713 5.713 10 C 0.494 3.506 11 O -0.509 6.509 12 C 0.091 3.909 13 N -0.467 5.467 14 C 0.068 3.932 15 C -0.197 4.197 16 C -0.029 4.029 17 O -0.542 6.542 18 Si 0.683 3.317 19 C -0.087 4.087 20 C -0.066 4.066 21 C -0.145 4.145 22 C -0.097 4.097 23 C -0.128 4.128 24 C 0.109 3.891 25 C -0.136 4.136 26 H 0.112 0.888 27 H 0.113 0.887 28 H 0.073 0.927 29 H 0.098 0.902 30 H 0.402 0.598 31 H 0.117 0.883 32 H 0.124 0.876 33 H 0.171 0.829 34 H 0.110 0.890 35 H 0.377 0.623 36 H -0.255 1.255 37 H -0.256 1.256 38 H 0.122 0.878 39 H 0.123 0.877 40 H 0.125 0.875 41 H 0.114 0.886 42 H 0.104 0.896 43 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.906 3.417 6.489 7.888 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.111 5.111 2 C -0.116 4.116 3 C -0.057 4.057 4 C -0.130 4.130 5 H 0.115 0.885 6 C -0.189 4.189 7 C 0.014 3.986 8 H 0.126 0.874 9 N -0.366 5.366 10 C 0.278 3.722 11 O -0.382 6.382 12 C -0.035 4.035 13 N -0.150 5.150 14 C -0.056 4.056 15 C -0.205 4.205 16 C -0.141 4.141 17 O -0.347 6.347 18 Si 0.585 3.415 19 C -0.091 4.091 20 C -0.084 4.084 21 C -0.165 4.165 22 C -0.116 4.116 23 C -0.148 4.148 24 C 0.005 3.995 25 C -0.174 4.174 26 H 0.130 0.870 27 H 0.131 0.869 28 H 0.091 0.909 29 H 0.117 0.883 30 H 0.237 0.763 31 H 0.135 0.865 32 H 0.142 0.858 33 H 0.188 0.812 34 H 0.127 0.873 35 H 0.224 0.776 36 H -0.179 1.179 37 H -0.181 1.181 38 H 0.140 0.860 39 H 0.141 0.859 40 H 0.143 0.857 41 H 0.132 0.868 42 H 0.123 0.877 43 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 1.799 3.606 5.730 7.005 hybrid contribution -0.478 0.243 0.009 0.537 sum 1.320 3.849 5.739 7.036 Atomic orbital electron populations 1.81300 1.13160 1.08400 1.08215 1.29220 0.95343 0.93548 0.93527 1.19335 0.81691 1.04524 1.00171 1.22675 0.96712 0.99739 0.93887 0.88459 1.23637 0.98239 0.99220 0.97763 1.21821 0.98903 0.88738 0.89109 0.87417 1.45629 1.62868 1.18163 1.09915 1.21007 0.78715 0.89714 0.82735 1.90819 1.41138 1.30623 1.75651 1.21581 1.03230 0.96959 0.81727 1.43184 1.12185 1.48872 1.10755 1.21504 0.86875 1.02282 0.94981 1.20650 0.96377 1.07630 0.95814 1.24335 0.93709 0.94176 1.01889 1.86492 1.76493 1.36804 1.34906 0.95263 0.79661 0.77697 0.88913 1.18948 0.93312 1.02583 0.94255 1.20313 0.95588 0.96051 0.96480 1.20672 0.94262 1.02486 0.99034 1.20827 0.99681 0.98485 0.92578 1.19948 0.93140 1.02448 0.99310 1.18155 0.94193 0.98495 0.88700 1.23378 0.95027 1.03484 0.95474 0.87008 0.86878 0.90862 0.88344 0.76300 0.86503 0.85840 0.81183 0.87270 0.77551 1.17908 1.18061 0.85965 0.85932 0.85744 0.86791 0.87743 0.90128 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.51 18.54 42.15 0.78 -0.73 16 2 C 0.20 -0.16 15.42 -20.76 -0.32 -0.48 16 3 C -0.02 0.10 5.54 -29.52 -0.16 -0.06 16 4 C -0.11 0.65 3.50 -89.67 -0.31 0.34 16 5 H 0.10 -0.57 8.12 -51.93 -0.42 -0.99 16 6 C -0.15 0.60 7.44 -25.78 -0.19 0.41 16 7 C 0.12 -0.47 4.32 -67.11 -0.29 -0.76 16 8 H 0.11 -0.19 7.47 -51.93 -0.39 -0.58 16 9 N -0.71 3.09 5.26 -53.01 -0.28 2.81 16 10 C 0.49 -0.64 7.90 -10.98 -0.09 -0.73 16 11 O -0.51 -1.92 16.02 5.56 0.09 -1.83 16 12 C 0.09 -0.30 6.48 -5.19 -0.03 -0.33 16 13 N -0.47 -0.33 2.27 -115.71 -0.26 -0.59 16 14 C 0.07 0.02 9.89 -16.73 -0.17 -0.15 16 15 C -0.20 -0.43 5.58 -102.71 -0.57 -1.00 16 16 C -0.03 -0.04 3.06 36.01 0.11 0.07 16 17 O -0.54 -1.15 12.88 -35.23 -0.45 -1.61 16 18 Si 0.68 -0.53 30.75 -169.99 -5.23 -5.75 16 19 C -0.09 -0.36 6.35 -105.14 -0.67 -1.03 16 20 C -0.07 -0.25 10.05 -39.65 -0.40 -0.65 16 21 C -0.15 -0.40 9.97 -39.95 -0.40 -0.80 16 22 C -0.10 -0.23 10.01 -39.54 -0.40 -0.62 16 23 C -0.13 -0.33 10.00 -39.43 -0.39 -0.72 16 24 C 0.11 0.35 6.80 -83.99 -0.57 -0.22 16 25 C -0.14 0.89 7.38 -25.92 -0.19 0.70 16 26 H 0.11 -0.81 7.85 -51.93 -0.41 -1.22 16 27 H 0.11 -0.87 8.14 -51.93 -0.42 -1.29 16 28 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 29 H 0.10 -0.44 7.90 -51.93 -0.41 -0.85 16 30 H 0.40 -2.90 8.70 -40.82 -0.36 -3.25 16 31 H 0.12 -0.59 8.14 -51.93 -0.42 -1.01 16 32 H 0.12 -0.83 8.11 -51.93 -0.42 -1.25 16 33 H 0.17 -0.59 6.34 -52.48 -0.33 -0.92 16 34 H 0.11 0.21 7.96 -51.93 -0.41 -0.21 16 35 H 0.38 -0.53 8.70 45.56 0.40 -0.13 16 36 H -0.25 -0.65 7.11 56.52 0.40 -0.25 16 37 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 38 H 0.12 0.36 8.06 -52.48 -0.42 -0.06 16 39 H 0.12 0.11 8.06 -52.49 -0.42 -0.31 16 40 H 0.12 0.03 8.06 -52.49 -0.42 -0.39 16 41 H 0.11 0.07 8.06 -52.49 -0.42 -0.35 16 42 H 0.10 -0.77 8.10 -51.93 -0.42 -1.19 16 43 H 0.08 -0.57 8.14 -51.93 -0.42 -0.99 16 LS Contribution 373.69 15.07 5.63 5.63 Total: 0.00 -13.35 373.69 -10.52 -23.87 By element: Atomic # 1 Polarization: -10.00 SS G_CDS: -5.75 Total: -15.75 kcal Atomic # 6 Polarization: -0.99 SS G_CDS: -5.05 Total: -6.04 kcal Atomic # 7 Polarization: 1.24 SS G_CDS: 0.24 Total: 1.48 kcal Atomic # 8 Polarization: -3.07 SS G_CDS: -0.36 Total: -3.44 kcal Atomic # 14 Polarization: -0.53 SS G_CDS: -5.23 Total: -5.75 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -13.35 -10.52 -23.87 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_9818708.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 80.825 kcal (2) G-P(sol) polarization free energy of solvation -13.351 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 67.474 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.520 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.870 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.954 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds