Wall clock time and date at job start Tue Mar 9 2021 13:06:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.36766 * 125.79985 * 2 1 4 4 C 1.47263 * 126.94399 * 0.02693 * 3 2 1 5 5 O 1.21626 * 119.99840 * 359.97438 * 4 3 2 6 6 N 1.34778 * 119.99989 * 180.02562 * 4 3 2 7 7 C 1.46493 * 119.99851 * 179.97438 * 6 4 3 8 8 H 1.09005 * 112.85265 * 23.79700 * 7 6 4 9 9 C 1.53780 * 113.61632 * 155.00050 * 7 6 4 10 10 C 1.53782 * 87.08453 * 89.11115 * 9 7 6 11 11 H 1.08998 * 113.61289 * 270.88492 * 10 9 7 12 12 C 1.53001 * 113.61248 * 140.06520 * 10 9 7 13 13 C 1.47203 * 109.46951 * 174.99984 * 12 10 9 14 14 N 9.14763 * 116.20112 * 334.55714 * 2 1 3 15 15 C 1.53779 * 113.61430 * 252.49379 * 7 6 4 16 16 C 1.46688 * 106.11340 * 180.02562 * 3 2 1 17 17 C 1.34486 * 106.33446 * 359.97438 * 16 3 2 18 18 C 1.50699 * 125.57351 * 179.97438 * 17 16 3 19 19 O 1.42898 * 109.46964 * 300.00243 * 18 17 16 20 20 Si 1.86301 * 109.47146 * 180.02562 * 18 17 16 21 21 N 1.34657 * 125.79712 * 180.27237 * 2 1 3 22 22 H 1.08998 * 109.47406 * 90.00299 * 1 2 3 23 23 H 1.09008 * 109.46926 * 210.00125 * 1 2 3 24 24 H 1.08995 * 109.47283 * 329.99372 * 1 2 3 25 25 H 0.97001 * 119.99455 * 359.97438 * 6 4 3 26 26 H 1.08999 * 113.61597 * 203.66675 * 9 7 6 27 27 H 1.09009 * 113.61199 * 334.47810 * 9 7 6 28 28 H 1.09002 * 109.47328 * 295.00135 * 12 10 9 29 29 H 1.09004 * 109.47057 * 55.00388 * 12 10 9 30 30 H 1.09004 * 113.61472 * 25.43065 * 15 7 6 31 31 H 1.08996 * 113.61991 * 156.33225 * 15 7 6 32 32 H 1.07994 * 126.83442 * 180.02562 * 16 3 2 33 33 H 1.09002 * 109.46959 * 60.00214 * 18 17 16 34 34 H 0.96698 * 113.99898 * 299.99550 * 19 18 17 35 35 H 1.48504 * 110.00019 * 58.68329 * 20 18 17 36 36 H 1.48503 * 110.00152 * 180.02562 * 20 18 17 37 37 H 0.96995 * 124.86017 * 359.97438 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1093 0.0000 4 6 1.8702 2.5156 0.0006 5 8 0.6839 2.7839 0.0006 6 7 2.7850 3.5054 0.0000 7 6 2.3504 4.9044 -0.0001 8 1 1.3473 5.0361 0.4057 9 6 3.3874 5.8717 0.5947 10 6 3.9685 5.9965 -0.8236 11 1 4.7342 5.2541 -1.0486 12 6 4.3956 7.4198 -1.1878 13 6 5.0447 7.4144 -2.5090 14 7 5.5459 7.4117 -3.5261 15 6 2.5718 5.6182 -1.3440 16 6 3.6882 0.6151 -0.0006 17 6 3.6096 -0.7274 -0.0004 18 6 4.7819 -1.6743 -0.0014 19 8 5.5746 -1.4496 -1.1689 20 14 4.1615 -3.4310 -0.0013 21 7 2.2947 -1.0922 -0.0052 22 1 -0.3634 -0.0001 -1.0276 23 1 -0.3633 -0.8900 0.5139 24 1 -0.3633 0.8899 0.5139 25 1 3.7311 3.2913 -0.0005 26 1 2.9544 6.7979 0.9724 27 1 4.0660 5.4008 1.3062 28 1 3.5184 8.0663 -1.2166 29 1 5.0964 7.7914 -0.4402 30 1 2.5928 4.9424 -2.1991 31 1 1.9157 6.4751 -1.4967 32 1 4.5890 1.2108 -0.0004 33 1 5.3883 -1.5027 0.8880 34 1 5.0984 -1.5844 -1.9996 35 1 3.3076 -3.6680 -1.1930 36 1 5.3081 -4.3747 -0.0017 37 1 1.9734 -2.0074 -0.0092 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534922_9865296.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:02 Heat of formation + Delta-G solvation = 24.996810 kcal Electronic energy + Delta-G solvation = -20740.084655 eV Core-core repulsion = 17485.435824 eV Total energy + Delta-G solvation = -3254.648831 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 276.126 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -42.52379 -41.08379 -39.21285 -37.97748 -37.37434 -34.53626 -32.83980 -32.28401 -30.95111 -28.98676 -26.79789 -25.92858 -24.60734 -23.19788 -21.63513 -20.73819 -20.22533 -18.83031 -18.65361 -17.79708 -17.03630 -16.84970 -16.71402 -16.15225 -16.01838 -15.62840 -15.48929 -14.92600 -14.83753 -14.57189 -14.28941 -14.02107 -13.97965 -13.83775 -13.58926 -13.52335 -13.43067 -13.11072 -12.82287 -12.65640 -12.49247 -12.21739 -12.05480 -11.56008 -11.26883 -10.96228 -10.60937 -10.03334 -9.82387 -9.17518 -5.27001 0.75326 0.96009 1.23607 1.29117 1.68421 1.86309 1.90668 1.95915 2.38803 2.62373 2.95503 3.16037 3.38778 3.52307 3.55869 3.77372 3.80425 3.81033 4.09380 4.15585 4.17484 4.37727 4.41383 4.46605 4.49666 4.65042 4.65930 4.67372 4.72773 4.83177 4.96492 4.99445 5.01824 5.11131 5.25788 5.65095 5.70021 5.83411 6.21390 6.30063 6.66851 6.68160 7.45943 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.100 4.100 2 C 0.126 3.874 3 C -0.242 4.242 4 C 0.597 3.403 5 O -0.546 6.546 6 N -0.711 5.711 7 C 0.123 3.877 8 H 0.107 0.893 9 C -0.137 4.137 10 C -0.111 4.111 11 H 0.097 0.903 12 C -0.018 4.018 13 C 0.204 3.796 14 N -0.436 5.436 15 C -0.151 4.151 16 C -0.128 4.128 17 C -0.027 4.027 18 C -0.040 4.040 19 O -0.522 6.522 20 Si 0.668 3.332 21 N -0.545 5.545 22 H 0.080 0.920 23 H 0.068 0.932 24 H 0.105 0.895 25 H 0.401 0.599 26 H 0.102 0.898 27 H 0.079 0.921 28 H 0.111 0.889 29 H 0.112 0.888 30 H 0.072 0.928 31 H 0.096 0.904 32 H 0.146 0.854 33 H 0.130 0.870 34 H 0.378 0.622 35 H -0.255 1.255 36 H -0.246 1.246 37 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.406 -2.125 5.750 6.289 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.157 4.157 2 C 0.007 3.993 3 C -0.252 4.252 4 C 0.386 3.614 5 O -0.425 6.425 6 N -0.362 5.362 7 C 0.017 3.983 8 H 0.125 0.875 9 C -0.176 4.176 10 C -0.130 4.130 11 H 0.115 0.885 12 C -0.058 4.058 13 C -0.114 4.114 14 N -0.113 5.113 15 C -0.190 4.190 16 C -0.153 4.153 17 C -0.135 4.135 18 C -0.151 4.151 19 O -0.328 6.328 20 Si 0.568 3.432 21 N -0.144 5.144 22 H 0.099 0.901 23 H 0.087 0.913 24 H 0.123 0.877 25 H 0.235 0.765 26 H 0.121 0.879 27 H 0.098 0.902 28 H 0.129 0.871 29 H 0.130 0.870 30 H 0.091 0.909 31 H 0.115 0.885 32 H 0.164 0.836 33 H 0.147 0.853 34 H 0.226 0.774 35 H -0.180 1.180 36 H -0.169 1.169 37 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -1.051 -2.719 4.236 5.142 hybrid contribution 0.557 -0.076 -0.813 0.989 sum -0.495 -2.796 3.422 4.447 Atomic orbital electron populations 1.20663 0.86507 1.04699 1.03856 1.20414 0.93804 0.85242 0.99859 1.20082 0.93039 0.91989 1.20077 1.17297 0.85212 0.83976 0.74865 1.90755 1.16570 1.84316 1.50843 1.45427 1.09743 1.04943 1.76077 1.21751 0.99678 0.80215 0.96663 0.87489 1.23386 0.98166 1.00275 0.95725 1.22624 0.97729 0.95276 0.97395 0.88513 1.19353 1.00909 0.98957 0.86540 1.29153 0.93722 0.93538 0.95023 1.81198 1.09638 1.08129 1.12344 1.23593 0.95931 1.01157 0.98272 1.21786 0.95655 0.92593 1.05225 1.20477 0.84348 0.95635 1.13036 1.24372 0.92342 1.06639 0.91763 1.86654 1.39584 1.90903 1.15635 0.95659 0.84031 0.75113 0.88417 1.41728 1.05573 1.08503 1.58635 0.90122 0.91343 0.87688 0.76467 0.87912 0.90215 0.87060 0.86964 0.90882 0.88527 0.83582 0.85276 0.77435 1.17992 1.16924 0.74712 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.06 9.88 36.01 0.36 0.42 16 2 C 0.13 0.05 7.17 -81.88 -0.59 -0.53 16 3 C -0.24 -0.36 6.29 -103.35 -0.65 -1.01 16 4 C 0.60 1.47 7.81 -12.59 -0.10 1.37 16 5 O -0.55 -2.92 14.41 5.25 0.08 -2.85 16 6 N -0.71 0.35 5.26 -54.14 -0.28 0.07 16 7 C 0.12 -0.19 4.32 -67.12 -0.29 -0.48 16 8 H 0.11 0.01 7.46 -51.93 -0.39 -0.38 16 9 C -0.14 0.60 7.39 -25.92 -0.19 0.41 16 10 C -0.11 0.42 3.49 -89.81 -0.31 0.11 16 11 H 0.10 -0.32 8.12 -51.93 -0.42 -0.74 16 12 C -0.02 0.08 5.54 -29.52 -0.16 -0.09 16 13 C 0.20 0.11 15.41 -20.83 -0.32 -0.21 16 14 N -0.44 -2.04 18.52 42.07 0.78 -1.26 16 15 C -0.15 0.32 7.43 -25.92 -0.19 0.12 16 16 C -0.13 0.00 10.43 -37.50 -0.39 -0.39 16 17 C -0.03 0.02 6.11 -81.86 -0.50 -0.48 16 18 C -0.04 0.07 2.98 36.01 0.11 0.18 16 19 O -0.52 0.09 12.87 -35.23 -0.45 -0.36 16 20 Si 0.67 -1.86 30.94 -169.99 -5.26 -7.12 16 21 N -0.54 0.82 5.41 -5.42 -0.03 0.79 16 22 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 23 H 0.07 -0.19 8.14 -51.92 -0.42 -0.62 16 24 H 0.10 0.13 6.46 -51.93 -0.34 -0.21 16 25 H 0.40 -0.95 7.82 -40.82 -0.32 -1.26 16 26 H 0.10 -0.58 8.10 -51.93 -0.42 -1.00 16 27 H 0.08 -0.36 8.14 -51.92 -0.42 -0.78 16 28 H 0.11 -0.67 7.85 -51.93 -0.41 -1.07 16 29 H 0.11 -0.70 8.14 -51.93 -0.42 -1.12 16 30 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 31 H 0.10 -0.30 7.90 -51.93 -0.41 -0.71 16 32 H 0.15 -0.20 7.69 -52.49 -0.40 -0.61 16 33 H 0.13 -0.35 7.96 -51.93 -0.41 -0.77 16 34 H 0.38 -1.00 8.70 45.56 0.40 -0.60 16 35 H -0.26 0.23 7.11 56.52 0.40 0.63 16 36 H -0.25 -0.19 7.11 56.52 0.40 0.22 16 37 H 0.41 -1.63 6.70 -40.82 -0.27 -1.90 16 LS Contribution 321.37 15.07 4.84 4.84 Total: 0.00 -10.02 321.37 -8.27 -18.29 By element: Atomic # 1 Polarization: -7.13 SS G_CDS: -4.71 Total: -11.84 kcal Atomic # 6 Polarization: 2.67 SS G_CDS: -3.24 Total: -0.57 kcal Atomic # 7 Polarization: -0.87 SS G_CDS: 0.47 Total: -0.40 kcal Atomic # 8 Polarization: -2.83 SS G_CDS: -0.38 Total: -3.21 kcal Atomic # 14 Polarization: -1.86 SS G_CDS: -5.26 Total: -7.12 kcal Total LS contribution 4.84 Total: 4.84 kcal Total: -10.02 -8.27 -18.29 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_9865296.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.287 kcal (2) G-P(sol) polarization free energy of solvation -10.017 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.270 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.273 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.290 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.997 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds