Wall clock time and date at job start Tue Mar 9 2021 13:06:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.36766 * 125.79985 * 2 1 4 4 C 1.47263 * 126.94399 * 0.02693 * 3 2 1 5 5 O 1.21626 * 119.99840 * 359.97438 * 4 3 2 6 6 N 1.34778 * 119.99989 * 180.02562 * 4 3 2 7 7 C 1.46493 * 119.99851 * 179.97438 * 6 4 3 8 8 H 1.09005 * 112.85265 * 23.79700 * 7 6 4 9 9 C 1.53780 * 113.61632 * 155.00050 * 7 6 4 10 10 C 1.53782 * 87.08453 * 89.11115 * 9 7 6 11 11 H 1.08998 * 113.61289 * 270.88492 * 10 9 7 12 12 C 1.53001 * 113.61248 * 140.06520 * 10 9 7 13 13 C 1.47203 * 109.46951 * 174.99984 * 12 10 9 14 14 N 9.14763 * 116.20112 * 334.55714 * 2 1 3 15 15 C 1.53779 * 113.61430 * 252.49379 * 7 6 4 16 16 C 1.46688 * 106.11340 * 180.02562 * 3 2 1 17 17 C 1.34486 * 106.33446 * 359.97438 * 16 3 2 18 18 C 1.50699 * 125.57351 * 179.97438 * 17 16 3 19 19 O 1.42898 * 109.46964 * 300.00243 * 18 17 16 20 20 Si 1.86301 * 109.47146 * 180.02562 * 18 17 16 21 21 N 1.34657 * 125.79712 * 180.27237 * 2 1 3 22 22 H 1.08998 * 109.47406 * 90.00299 * 1 2 3 23 23 H 1.09008 * 109.46926 * 210.00125 * 1 2 3 24 24 H 1.08995 * 109.47283 * 329.99372 * 1 2 3 25 25 H 0.97001 * 119.99455 * 359.97438 * 6 4 3 26 26 H 1.08999 * 113.61597 * 203.66675 * 9 7 6 27 27 H 1.09009 * 113.61199 * 334.47810 * 9 7 6 28 28 H 1.09002 * 109.47328 * 295.00135 * 12 10 9 29 29 H 1.09004 * 109.47057 * 55.00388 * 12 10 9 30 30 H 1.09004 * 113.61472 * 25.43065 * 15 7 6 31 31 H 1.08996 * 113.61991 * 156.33225 * 15 7 6 32 32 H 1.07994 * 126.83442 * 180.02562 * 16 3 2 33 33 H 1.09002 * 109.46959 * 60.00214 * 18 17 16 34 34 H 0.96698 * 113.99898 * 299.99550 * 19 18 17 35 35 H 1.48504 * 110.00019 * 58.68329 * 20 18 17 36 36 H 1.48503 * 110.00152 * 180.02562 * 20 18 17 37 37 H 0.96995 * 124.86017 * 359.97438 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1093 0.0000 4 6 1.8702 2.5156 0.0006 5 8 0.6839 2.7839 0.0006 6 7 2.7850 3.5054 0.0000 7 6 2.3504 4.9044 -0.0001 8 1 1.3473 5.0361 0.4057 9 6 3.3874 5.8717 0.5947 10 6 3.9685 5.9965 -0.8236 11 1 4.7342 5.2541 -1.0486 12 6 4.3956 7.4198 -1.1878 13 6 5.0447 7.4144 -2.5090 14 7 5.5459 7.4117 -3.5261 15 6 2.5718 5.6182 -1.3440 16 6 3.6882 0.6151 -0.0006 17 6 3.6096 -0.7274 -0.0004 18 6 4.7819 -1.6743 -0.0014 19 8 5.5746 -1.4496 -1.1689 20 14 4.1615 -3.4310 -0.0013 21 7 2.2947 -1.0922 -0.0052 22 1 -0.3634 -0.0001 -1.0276 23 1 -0.3633 -0.8900 0.5139 24 1 -0.3633 0.8899 0.5139 25 1 3.7311 3.2913 -0.0005 26 1 2.9544 6.7979 0.9724 27 1 4.0660 5.4008 1.3062 28 1 3.5184 8.0663 -1.2166 29 1 5.0964 7.7914 -0.4402 30 1 2.5928 4.9424 -2.1991 31 1 1.9157 6.4751 -1.4967 32 1 4.5890 1.2108 -0.0004 33 1 5.3883 -1.5027 0.8880 34 1 5.0984 -1.5844 -1.9996 35 1 3.3076 -3.6680 -1.1930 36 1 5.3081 -4.3747 -0.0017 37 1 1.9734 -2.0074 -0.0092 There are 50 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 50 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534922_9865296.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:02 Heat of formation + Delta-G solvation = 23.036417 kcal Electronic energy + Delta-G solvation = -20740.169664 eV Core-core repulsion = 17485.435824 eV Total energy + Delta-G solvation = -3254.733840 eV No. of doubly occupied orbitals = 50 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 276.126 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -42.49016 -40.98648 -39.25007 -37.91286 -37.48778 -34.56744 -32.80745 -32.23161 -30.80833 -28.91241 -26.56135 -25.89291 -24.49977 -23.14618 -21.57275 -20.76533 -20.06617 -18.77512 -18.55673 -17.77896 -16.94033 -16.81630 -16.64457 -16.04204 -15.93468 -15.57060 -15.42184 -14.91476 -14.81919 -14.52514 -14.30797 -14.02408 -13.96455 -13.81536 -13.63124 -13.36919 -13.27340 -13.03425 -12.76741 -12.61298 -12.31257 -12.15739 -11.82254 -11.39434 -11.06051 -10.99836 -10.63635 -10.07713 -9.77713 -9.15575 -5.07389 0.70452 1.10258 1.29227 1.45410 1.81604 1.85027 1.89957 2.05101 2.44028 2.53432 3.11269 3.31351 3.60511 3.66094 3.77134 3.87787 3.97106 4.02249 4.12614 4.24120 4.44762 4.51430 4.54674 4.71856 4.72422 4.77678 4.81425 4.91585 4.97281 5.00017 5.05369 5.16311 5.24198 5.25447 5.38471 5.68478 5.76407 5.86386 6.38458 6.44235 6.68098 6.68893 7.38254 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C 0.118 3.882 3 C -0.266 4.266 4 C 0.588 3.412 5 O -0.585 6.585 6 N -0.701 5.701 7 C 0.107 3.893 8 H 0.088 0.912 9 C -0.116 4.116 10 C -0.101 4.101 11 H 0.091 0.909 12 C -0.014 4.014 13 C 0.234 3.766 14 N -0.519 5.519 15 C -0.154 4.154 16 C -0.138 4.138 17 C -0.022 4.022 18 C -0.047 4.047 19 O -0.541 6.541 20 Si 0.756 3.244 21 N -0.535 5.535 22 H 0.079 0.921 23 H 0.093 0.907 24 H 0.083 0.917 25 H 0.410 0.590 26 H 0.125 0.875 27 H 0.088 0.912 28 H 0.137 0.863 29 H 0.145 0.855 30 H 0.046 0.954 31 H 0.108 0.892 32 H 0.156 0.844 33 H 0.141 0.859 34 H 0.386 0.614 35 H -0.277 1.277 36 H -0.294 1.294 37 H 0.426 0.574 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.084 -1.952 7.138 7.479 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.001 4.001 3 C -0.276 4.276 4 C 0.379 3.621 5 O -0.467 6.467 6 N -0.352 5.352 7 C 0.002 3.998 8 H 0.106 0.894 9 C -0.154 4.154 10 C -0.121 4.121 11 H 0.110 0.890 12 C -0.054 4.054 13 C -0.082 4.082 14 N -0.197 5.197 15 C -0.193 4.193 16 C -0.162 4.162 17 C -0.130 4.130 18 C -0.157 4.157 19 O -0.348 6.348 20 Si 0.660 3.340 21 N -0.135 5.135 22 H 0.098 0.902 23 H 0.112 0.888 24 H 0.102 0.898 25 H 0.246 0.754 26 H 0.143 0.857 27 H 0.106 0.894 28 H 0.155 0.845 29 H 0.162 0.838 30 H 0.065 0.935 31 H 0.127 0.873 32 H 0.174 0.826 33 H 0.158 0.842 34 H 0.236 0.764 35 H -0.203 1.203 36 H -0.221 1.221 37 H 0.267 0.733 Dipole moment (debyes) X Y Z Total from point charges -0.709 -2.528 5.632 6.214 hybrid contribution 0.456 -0.167 -1.234 1.326 sum -0.253 -2.695 4.399 5.165 Atomic orbital electron populations 1.20620 0.86051 1.04892 1.03850 1.20576 0.94317 0.85595 0.99660 1.20224 0.94117 0.91873 1.21376 1.17593 0.85058 0.84943 0.74553 1.90723 1.18078 1.84950 1.52988 1.45395 1.09848 1.05110 1.74814 1.21925 0.99928 0.80195 0.97753 0.89414 1.23335 0.96765 1.00083 0.95227 1.22516 0.96387 0.95589 0.97564 0.89041 1.19727 1.02259 0.98922 0.84461 1.30067 0.91867 0.91104 0.95204 1.81220 1.12587 1.10858 1.15051 1.23647 0.97740 1.01050 0.96873 1.21954 0.95399 0.93206 1.05625 1.20616 0.84694 0.95551 1.12165 1.24638 0.92113 1.07193 0.91780 1.86628 1.40493 1.91159 1.16528 0.94634 0.80924 0.71910 0.86530 1.41697 1.05224 1.08798 1.57800 0.90202 0.88804 0.89782 0.75393 0.85667 0.89365 0.84477 0.83780 0.93510 0.87346 0.82599 0.84168 0.76421 1.20334 1.22075 0.73256 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.04 9.88 71.24 0.70 0.74 16 2 C 0.12 0.17 7.17 41.78 0.30 0.47 16 3 C -0.27 -1.07 6.29 -19.04 -0.12 -1.19 16 4 C 0.59 3.96 7.81 86.62 0.68 4.63 16 5 O -0.59 -7.76 14.41 -4.11 -0.06 -7.81 16 6 N -0.70 -0.03 5.26 -443.46 -2.33 -2.36 16 7 C 0.11 -0.28 4.32 45.52 0.20 -0.08 16 8 H 0.09 0.14 7.46 -2.38 -0.02 0.12 16 9 C -0.12 1.22 7.39 31.12 0.23 1.45 16 10 C -0.10 0.89 3.49 -10.27 -0.04 0.86 16 11 H 0.09 -0.67 8.12 -2.39 -0.02 -0.69 16 12 C -0.01 0.16 5.54 28.79 0.16 0.32 16 13 C 0.23 0.19 15.41 89.47 1.38 1.57 16 14 N -0.52 -5.47 18.52 19.98 0.37 -5.10 16 15 C -0.15 0.60 7.43 31.12 0.23 0.83 16 16 C -0.14 -0.04 10.43 23.62 0.25 0.21 16 17 C -0.02 0.05 6.11 40.98 0.25 0.30 16 18 C -0.05 0.21 2.98 71.24 0.21 0.42 16 19 O -0.54 0.32 12.87 -148.98 -1.92 -1.60 16 20 Si 0.76 -4.60 30.94 68.60 2.12 -2.48 16 21 N -0.53 1.80 5.41 -171.07 -0.93 0.87 16 22 H 0.08 -0.03 8.14 -2.39 -0.02 -0.05 16 23 H 0.09 -0.57 8.14 -2.38 -0.02 -0.59 16 24 H 0.08 0.38 6.46 -2.39 -0.02 0.36 16 25 H 0.41 -1.72 7.82 -92.71 -0.73 -2.44 16 26 H 0.13 -1.81 8.10 -2.39 -0.02 -1.82 16 27 H 0.09 -0.99 8.14 -2.38 -0.02 -1.01 16 28 H 0.14 -2.08 7.85 -2.39 -0.02 -2.10 16 29 H 0.14 -2.34 8.14 -2.38 -0.02 -2.36 16 30 H 0.05 0.08 8.14 -2.38 -0.02 0.06 16 31 H 0.11 -0.70 7.90 -2.39 -0.02 -0.72 16 32 H 0.16 -0.42 7.69 -2.91 -0.02 -0.45 16 33 H 0.14 -0.91 7.96 -2.39 -0.02 -0.93 16 34 H 0.39 -2.06 8.70 -74.06 -0.64 -2.71 16 35 H -0.28 0.68 7.11 99.48 0.71 1.38 16 36 H -0.29 -0.64 7.11 99.48 0.71 0.06 16 37 H 0.43 -3.75 6.70 -92.71 -0.62 -4.37 16 Total: 0.00 -27.09 321.37 0.86 -26.23 By element: Atomic # 1 Polarization: -17.45 SS G_CDS: -0.82 Total: -18.28 kcal Atomic # 6 Polarization: 6.10 SS G_CDS: 4.43 Total: 10.53 kcal Atomic # 7 Polarization: -3.70 SS G_CDS: -2.89 Total: -6.58 kcal Atomic # 8 Polarization: -7.44 SS G_CDS: -1.98 Total: -9.42 kcal Atomic # 14 Polarization: -4.60 SS G_CDS: 2.12 Total: -2.48 kcal Total: -27.09 0.86 -26.23 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_9865296.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 49.264 kcal (2) G-P(sol) polarization free energy of solvation -27.092 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.172 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.864 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.227 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.036 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds