Wall clock time and date at job start Tue Mar 9 2021 13:06:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81396 * 1 3 3 C 1.81407 * 102.99910 * 2 1 4 4 C 1.53004 * 109.46878 * 179.97438 * 3 2 1 5 5 H 1.09001 * 112.90365 * 43.74949 * 4 3 2 6 6 C 1.53777 * 113.61051 * 174.99770 * 4 3 2 7 7 C 1.53784 * 87.08100 * 139.98647 * 6 4 3 8 8 H 1.08996 * 113.61576 * 219.94231 * 7 6 4 9 9 N 1.46492 * 113.61822 * 89.11418 * 7 6 4 10 10 C 1.34779 * 120.00462 * 155.00536 * 9 7 6 11 11 O 1.21696 * 119.99388 * 359.97438 * 10 9 7 12 12 C 1.46674 * 120.00361 * 180.02562 * 10 9 7 13 13 C 1.37877 * 126.23342 * 180.32852 * 12 10 9 14 14 C 1.50703 * 126.45699 * 359.95445 * 13 12 10 15 15 C 1.39834 * 107.08208 * 180.12037 * 13 12 10 16 16 C 1.50706 * 126.06357 * 179.83835 * 15 13 12 17 17 O 1.42896 * 109.47323 * 308.82254 * 16 15 13 18 18 Si 1.86299 * 109.46959 * 68.82326 * 16 15 13 19 19 C 1.35445 * 107.86828 * 359.57866 * 15 13 12 20 20 C 1.50699 * 125.56746 * 180.28720 * 19 15 13 21 21 N 1.35541 * 108.87241 * 0.26271 * 19 15 13 22 22 C 1.53777 * 113.61759 * 272.49827 * 4 3 2 23 23 H 1.08994 * 109.47623 * 300.00400 * 1 2 3 24 24 H 1.09008 * 109.46844 * 60.00503 * 1 2 3 25 25 H 1.09002 * 109.47211 * 179.97438 * 1 2 3 26 26 H 1.08994 * 109.47048 * 59.99672 * 3 2 1 27 27 H 1.08994 * 109.46836 * 299.99782 * 3 2 1 28 28 H 1.08995 * 113.61650 * 25.43606 * 6 4 3 29 29 H 1.08997 * 113.61365 * 254.53092 * 6 4 3 30 30 H 0.97006 * 120.00009 * 335.00063 * 9 7 6 31 31 H 1.08997 * 109.47085 * 270.19445 * 14 13 12 32 32 H 1.09000 * 109.46973 * 30.19433 * 14 13 12 33 33 H 1.08990 * 109.47025 * 150.19461 * 14 13 12 34 34 H 1.08997 * 109.46662 * 188.81718 * 16 15 13 35 35 H 0.96700 * 114.00030 * 179.97438 * 17 16 15 36 36 H 1.48503 * 110.00157 * 293.90868 * 18 16 15 37 37 H 1.48501 * 110.00395 * 55.22545 * 18 16 15 38 38 H 1.09006 * 109.47300 * 92.90573 * 20 19 15 39 39 H 1.08999 * 109.47412 * 212.90849 * 20 19 15 40 40 H 1.09007 * 109.46704 * 332.91109 * 20 19 15 41 41 H 0.96999 * 125.68037 * 180.02562 * 21 19 15 42 42 H 1.09000 * 113.61617 * 105.47173 * 22 4 3 43 43 H 1.09004 * 113.61114 * 334.56950 * 22 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2220 1.7676 0.0000 4 6 3.7423 1.9400 0.0006 5 1 4.2458 1.2670 -0.6934 6 6 4.1962 3.4041 -0.1222 7 6 5.2868 3.0703 0.9094 8 1 5.4515 3.8605 1.6419 9 7 6.5310 2.5812 0.3106 10 6 7.6977 2.7227 0.9705 11 8 7.7174 3.2573 2.0636 12 6 8.9436 2.2335 0.3707 13 6 10.2011 2.3050 0.9316 14 6 10.5516 2.8996 2.2713 15 6 11.0904 1.7253 0.0214 16 6 12.5794 1.5819 0.2046 17 8 13.1391 2.8466 0.5640 18 14 12.9227 0.3446 1.5544 19 6 10.3753 1.3104 -1.0515 20 6 10.9394 0.6235 -2.2684 21 7 9.0694 1.6133 -0.8517 22 6 4.3608 1.9485 1.4085 23 1 -0.3634 0.5138 0.8899 24 1 -0.3633 0.5138 -0.8901 25 1 -0.3634 -1.0277 -0.0005 26 1 1.8030 2.2372 0.8899 27 1 1.8031 2.2371 -0.8900 28 1 3.4590 4.1215 0.2384 29 1 4.5894 3.6582 -1.1065 30 1 6.5153 2.1554 -0.5608 31 1 10.7789 3.9588 2.1504 32 1 9.7080 2.7844 2.9518 33 1 11.4214 2.3858 2.6804 34 1 13.0284 1.2373 -0.7269 35 1 14.0965 2.8290 0.6986 36 1 12.4445 0.8699 2.8585 37 1 12.2484 -0.9424 1.2473 38 1 10.8843 -0.4569 -2.1342 39 1 10.3625 0.9103 -3.1477 40 1 11.9796 0.9202 -2.4036 41 1 8.3441 1.4241 -1.4674 42 1 4.8868 1.0276 1.6600 43 1 3.6685 2.2680 2.1876 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535148_12297754.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:19 Heat of formation + Delta-G solvation = -6.549767 kcal Electronic energy + Delta-G solvation = -23693.981713 eV Core-core repulsion = 20254.156361 eV Total energy + Delta-G solvation = -3439.825352 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.134 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -42.66877 -41.09903 -39.19419 -37.58512 -34.88086 -33.69815 -33.03167 -30.77211 -29.80309 -29.22278 -27.43186 -26.87358 -26.36414 -24.00977 -22.63049 -20.79168 -20.47165 -19.83113 -19.35556 -18.18084 -17.49466 -16.97960 -16.86464 -16.40292 -16.21735 -15.85791 -15.50514 -15.15333 -15.12058 -15.06295 -14.70379 -14.43480 -14.26820 -14.12374 -13.93064 -13.84942 -13.70091 -13.65371 -13.46146 -13.21875 -13.04589 -12.92794 -12.55572 -12.35942 -12.23031 -11.64812 -11.55859 -11.35795 -10.98398 -10.87215 -10.50768 -10.17972 -9.44246 -8.99288 -8.71130 -4.85918 0.41364 0.62273 1.24218 1.55326 1.66552 1.83031 1.91652 2.01478 2.21311 2.38138 3.28163 3.38650 3.51603 3.56762 3.66989 3.73559 3.80677 4.00475 4.09587 4.11335 4.15889 4.17362 4.23446 4.29733 4.38009 4.40524 4.52006 4.56106 4.59098 4.62040 4.69714 4.73674 4.77520 4.88490 4.93853 5.01046 5.02790 5.14550 5.34851 5.40276 5.50166 5.72114 5.93798 6.26007 6.44274 6.80115 7.16480 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.266 6.266 3 C -0.075 4.075 4 C -0.096 4.096 5 H 0.096 0.904 6 C -0.135 4.135 7 C 0.122 3.878 8 H 0.109 0.891 9 N -0.716 5.716 10 C 0.595 3.405 11 O -0.519 6.519 12 C -0.069 4.069 13 C -0.040 4.040 14 C -0.095 4.095 15 C -0.171 4.171 16 C -0.024 4.024 17 O -0.544 6.544 18 Si 0.667 3.333 19 C 0.079 3.921 20 C -0.097 4.097 21 N -0.535 5.535 22 C -0.142 4.142 23 H 0.077 0.923 24 H 0.076 0.924 25 H 0.102 0.898 26 H 0.084 0.916 27 H 0.083 0.917 28 H 0.100 0.900 29 H 0.077 0.923 30 H 0.393 0.607 31 H 0.074 0.926 32 H 0.077 0.923 33 H 0.067 0.933 34 H 0.068 0.932 35 H 0.379 0.621 36 H -0.246 1.246 37 H -0.264 1.264 38 H 0.080 0.920 39 H 0.072 0.928 40 H 0.090 0.910 41 H 0.416 0.584 42 H 0.075 0.925 43 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.569 -1.441 -5.102 5.332 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.040 6.040 3 C -0.223 4.223 4 C -0.115 4.115 5 H 0.114 0.886 6 C -0.175 4.175 7 C 0.016 3.984 8 H 0.127 0.873 9 N -0.367 5.367 10 C 0.384 3.616 11 O -0.394 6.394 12 C -0.180 4.180 13 C -0.048 4.048 14 C -0.151 4.151 15 C -0.177 4.177 16 C -0.135 4.135 17 O -0.349 6.349 18 Si 0.568 3.432 19 C -0.040 4.040 20 C -0.154 4.154 21 N -0.133 5.133 22 C -0.181 4.181 23 H 0.096 0.904 24 H 0.096 0.904 25 H 0.121 0.879 26 H 0.103 0.897 27 H 0.102 0.898 28 H 0.119 0.881 29 H 0.095 0.905 30 H 0.227 0.773 31 H 0.093 0.907 32 H 0.096 0.904 33 H 0.085 0.915 34 H 0.086 0.914 35 H 0.226 0.774 36 H -0.171 1.171 37 H -0.189 1.189 38 H 0.099 0.901 39 H 0.091 0.909 40 H 0.109 0.891 41 H 0.254 0.746 42 H 0.094 0.906 43 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 0.082 -2.262 -3.778 4.404 hybrid contribution -1.929 0.828 -1.277 2.458 sum -1.848 -1.434 -5.055 5.570 Atomic orbital electron populations 1.23395 0.93917 1.06760 1.04982 1.87027 1.07659 1.11251 1.98055 1.23424 0.99225 0.94565 1.05090 1.22379 0.92676 0.97453 0.98998 0.88568 1.23404 0.97860 0.96248 0.99986 1.21815 0.82521 0.97533 0.96491 0.87264 1.45528 1.06556 1.62453 1.22203 1.16957 0.81515 0.78468 0.84677 1.90842 1.85866 1.43076 1.19644 1.20043 0.95285 1.13062 0.89608 1.19834 0.89747 0.98300 0.96912 1.20510 1.02045 1.00722 0.91867 1.18477 0.93998 1.09606 0.95662 1.23880 0.90446 0.93185 1.06003 1.86526 1.26325 1.29916 1.92144 0.96699 0.90960 0.76669 0.78872 1.20250 0.83081 1.02884 0.97776 1.20537 1.02210 1.00114 0.92560 1.41767 1.08227 1.46776 1.16525 1.23513 0.98503 0.99798 0.96301 0.90390 0.90450 0.87949 0.89731 0.89828 0.88133 0.90460 0.77292 0.90699 0.90411 0.91470 0.91390 0.77370 1.17051 1.18903 0.90130 0.90880 0.89144 0.74600 0.90629 0.88633 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.14 10.76 101.05 1.09 1.23 16 2 S -0.27 -0.24 22.37 -107.50 -2.40 -2.65 16 3 C -0.07 0.10 5.78 37.16 0.21 0.31 16 4 C -0.10 0.16 3.53 -89.81 -0.32 -0.16 16 5 H 0.10 -0.14 8.13 -51.93 -0.42 -0.56 16 6 C -0.14 0.31 7.39 -25.92 -0.19 0.12 16 7 C 0.12 -0.01 4.32 -67.12 -0.29 -0.30 16 8 H 0.11 0.17 7.46 -51.93 -0.39 -0.21 16 9 N -0.72 -0.21 5.26 -54.33 -0.29 -0.49 16 10 C 0.60 2.33 7.79 -12.85 -0.10 2.23 16 11 O -0.52 -3.79 14.41 5.19 0.07 -3.72 16 12 C -0.07 -0.24 7.06 -81.98 -0.58 -0.82 16 13 C -0.04 -0.20 5.88 -104.16 -0.61 -0.81 16 14 C -0.09 -0.51 9.14 36.01 0.33 -0.18 16 15 C -0.17 -0.53 4.43 -105.02 -0.47 -1.00 16 16 C -0.02 -0.02 2.78 36.01 0.10 0.08 16 17 O -0.54 -0.54 12.35 -35.23 -0.44 -0.98 16 18 Si 0.67 0.23 31.49 -169.99 -5.35 -5.13 16 19 C 0.08 0.07 7.13 -81.95 -0.58 -0.51 16 20 C -0.10 0.24 10.17 36.01 0.37 0.61 16 21 N -0.54 -0.16 5.99 -5.70 -0.03 -0.19 16 22 C -0.14 0.05 7.43 -25.92 -0.19 -0.15 16 23 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 24 H 0.08 -0.15 8.14 -51.92 -0.42 -0.57 16 25 H 0.10 -0.16 8.14 -51.92 -0.42 -0.58 16 26 H 0.08 -0.14 7.84 -51.93 -0.41 -0.55 16 27 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 28 H 0.10 -0.30 8.10 -51.93 -0.42 -0.72 16 29 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 30 H 0.39 -0.93 7.83 -40.82 -0.32 -1.25 16 31 H 0.07 0.40 8.14 -51.93 -0.42 -0.02 16 32 H 0.08 0.50 6.50 -51.93 -0.34 0.16 16 33 H 0.07 0.33 4.99 -51.93 -0.26 0.07 16 34 H 0.07 -0.12 6.47 -51.93 -0.34 -0.45 16 35 H 0.38 -1.54 8.74 45.56 0.40 -1.14 16 36 H -0.25 -0.90 5.75 56.52 0.32 -0.57 16 37 H -0.26 -0.90 7.11 56.52 0.40 -0.49 16 38 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 39 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 40 H 0.09 -0.28 6.86 -51.93 -0.36 -0.64 16 41 H 0.42 -1.33 8.19 -40.82 -0.33 -1.66 16 42 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 43 H 0.10 -0.07 7.90 -51.93 -0.41 -0.48 16 LS Contribution 360.59 15.07 5.43 5.43 Total: 0.00 -9.30 360.59 -10.91 -20.21 By element: Atomic # 1 Polarization: -6.48 SS G_CDS: -6.67 Total: -13.15 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: -1.24 Total: 0.66 kcal Atomic # 7 Polarization: -0.36 SS G_CDS: -0.32 Total: -0.68 kcal Atomic # 8 Polarization: -4.33 SS G_CDS: -0.36 Total: -4.69 kcal Atomic # 14 Polarization: 0.23 SS G_CDS: -5.35 Total: -5.13 kcal Atomic # 16 Polarization: -0.24 SS G_CDS: -2.40 Total: -2.65 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -9.30 -10.91 -20.21 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535148_12297754.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.657 kcal (2) G-P(sol) polarization free energy of solvation -9.296 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.361 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.910 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.206 kcal (6) G-S(sol) free energy of system = (1) + (5) -6.550 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds