Wall clock time and date at job start Tue Mar 9 2021 13:06:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81403 * 1 3 3 C 1.81394 * 103.00027 * 2 1 4 4 C 1.53003 * 109.47075 * 180.02562 * 3 2 1 5 5 H 1.08996 * 112.85140 * 43.79984 * 4 3 2 6 6 C 1.53781 * 113.61480 * 175.00018 * 4 3 2 7 7 C 1.53786 * 87.17350 * 139.93948 * 6 4 3 8 8 H 1.09000 * 113.61138 * 220.06261 * 7 6 4 9 9 N 1.46496 * 113.61518 * 89.15486 * 7 6 4 10 10 C 1.34779 * 119.99390 * 154.99856 * 9 7 6 11 11 O 1.21564 * 120.00449 * 0.02562 * 10 9 7 12 12 C 1.47700 * 119.99420 * 180.02562 * 10 9 7 13 13 C 1.39824 * 120.16524 * 179.72747 * 12 10 9 14 14 F 1.35099 * 120.10746 * 359.97438 * 13 12 10 15 15 C 1.38319 * 119.77987 * 179.81046 * 13 12 10 16 16 C 1.38204 * 120.11618 * 0.43805 * 15 13 12 17 17 C 1.38465 * 120.33752 * 359.79160 * 16 15 13 18 18 C 1.50701 * 119.88488 * 179.97438 * 17 16 15 19 19 O 1.42905 * 109.46835 * 245.01715 * 18 17 16 20 20 Si 1.86297 * 109.47533 * 5.02159 * 18 17 16 21 21 C 1.37850 * 120.22064 * 359.97438 * 17 16 15 22 22 C 1.53782 * 113.61259 * 272.49852 * 4 3 2 23 23 H 1.08998 * 109.47085 * 299.99907 * 1 2 3 24 24 H 1.08996 * 109.46772 * 60.00122 * 1 2 3 25 25 H 1.09000 * 109.47030 * 180.02562 * 1 2 3 26 26 H 1.08994 * 109.47190 * 60.00226 * 3 2 1 27 27 H 1.09002 * 109.47468 * 299.99658 * 3 2 1 28 28 H 1.09002 * 113.61445 * 254.52948 * 6 4 3 29 29 H 1.09002 * 113.61408 * 25.34678 * 6 4 3 30 30 H 0.97001 * 120.00117 * 335.00621 * 9 7 6 31 31 H 1.07997 * 119.94585 * 180.18420 * 15 13 12 32 32 H 1.08000 * 119.83199 * 179.76347 * 16 15 13 33 33 H 1.08999 * 109.46760 * 125.01978 * 18 17 16 34 34 H 0.96693 * 113.99538 * 60.00807 * 19 18 17 35 35 H 1.48506 * 109.99938 * 179.97438 * 20 18 17 36 36 H 1.48496 * 109.99839 * 301.31707 * 20 18 17 37 37 H 1.07997 * 120.06031 * 179.97438 * 21 17 16 38 38 H 1.08997 * 113.61668 * 334.56352 * 22 4 3 39 39 H 1.08998 * 113.61674 * 105.38861 * 22 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2221 1.7674 0.0000 4 6 3.7424 1.9399 -0.0006 5 1 4.2443 1.2673 -0.6961 6 6 4.1962 3.4040 -0.1235 7 6 5.2877 3.0726 0.9079 8 1 5.4504 3.8629 1.6407 9 7 6.5326 2.5852 0.3088 10 6 7.6992 2.7293 0.9683 11 8 7.7184 3.2631 2.0603 12 6 8.9544 2.2384 0.3641 13 6 10.1675 2.3911 1.0426 14 9 10.1960 2.9889 2.2537 15 6 11.3377 1.9250 0.4710 16 6 11.3094 1.3185 -0.7705 17 6 10.1115 1.1691 -1.4488 18 6 10.0926 0.5067 -2.8023 19 8 9.6897 1.4561 -3.7915 20 14 11.7969 -0.1271 -3.2075 21 6 8.9364 1.6242 -0.8901 22 6 4.3620 1.9481 1.4068 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0277 0.0005 26 1 1.8032 2.2370 0.8900 27 1 1.8032 2.2371 -0.8900 28 1 4.5887 3.6584 -1.1081 29 1 3.4587 4.1214 0.2364 30 1 6.5173 2.1591 -0.5624 31 1 12.2757 2.0388 0.9940 32 1 12.2263 0.9596 -1.2141 33 1 9.3889 -0.3256 -2.7896 34 1 10.2718 2.2253 -3.8584 35 1 11.7913 -0.7832 -4.5398 36 1 12.7713 0.9933 -3.1966 37 1 8.0036 1.5067 -1.4215 38 1 3.6704 2.2674 2.1865 39 1 4.8870 1.0266 1.6582 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535148_12335834.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:24 Heat of formation + Delta-G solvation = -56.445663 kcal Electronic energy + Delta-G solvation = -23284.522184 eV Core-core repulsion = 19621.354216 eV Total energy + Delta-G solvation = -3663.167968 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 312.098 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -49.85935 -41.58632 -40.52586 -39.23045 -37.68287 -34.83279 -32.74921 -32.38279 -30.57056 -29.71636 -26.82680 -26.75833 -25.73519 -24.13458 -23.02024 -21.71146 -20.37540 -19.28613 -18.41943 -18.38856 -17.43309 -17.37527 -16.85546 -16.76878 -16.36104 -16.25599 -15.98291 -15.86007 -15.65504 -15.31910 -15.09736 -14.89945 -14.59117 -14.38035 -14.32711 -14.02103 -13.70090 -13.64862 -13.41903 -13.27247 -12.90089 -12.87197 -12.39484 -12.19219 -11.82680 -11.60251 -11.31877 -11.10291 -10.93577 -10.72554 -10.42829 -10.11115 -9.87293 -8.66241 -5.09748 -0.52721 -0.11805 0.66802 1.10789 1.44495 1.59841 1.63803 1.83700 1.92828 2.45756 3.00419 3.15858 3.31550 3.35393 3.39819 3.43338 3.51510 3.61632 3.72845 3.86122 3.98443 4.14169 4.15297 4.20029 4.28356 4.30096 4.41457 4.45239 4.60676 4.63485 4.64968 4.69051 4.73566 4.80262 4.84593 4.94294 4.98005 5.02349 5.06859 5.48965 5.53234 6.22327 6.35410 7.11620 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.264 6.264 3 C -0.075 4.075 4 C -0.096 4.096 5 H 0.099 0.901 6 C -0.135 4.135 7 C 0.120 3.880 8 H 0.108 0.892 9 N -0.708 5.708 10 C 0.562 3.438 11 O -0.518 6.518 12 C -0.175 4.175 13 C 0.168 3.832 14 F -0.110 7.110 15 C -0.157 4.157 16 C -0.061 4.061 17 C -0.138 4.138 18 C -0.074 4.074 19 O -0.528 6.528 20 Si 0.686 3.314 21 C -0.030 4.030 22 C -0.142 4.142 23 H 0.077 0.923 24 H 0.076 0.924 25 H 0.102 0.898 26 H 0.083 0.917 27 H 0.083 0.917 28 H 0.078 0.922 29 H 0.100 0.900 30 H 0.401 0.599 31 H 0.150 0.850 32 H 0.142 0.858 33 H 0.123 0.877 34 H 0.378 0.622 35 H -0.254 1.254 36 H -0.257 1.257 37 H 0.138 0.862 38 H 0.095 0.905 39 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.185 -1.633 -3.054 3.468 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.038 6.038 3 C -0.223 4.223 4 C -0.115 4.115 5 H 0.117 0.883 6 C -0.175 4.175 7 C 0.015 3.985 8 H 0.126 0.874 9 N -0.360 5.360 10 C 0.349 3.651 11 O -0.394 6.394 12 C -0.179 4.179 13 C 0.147 3.853 14 F -0.088 7.088 15 C -0.175 4.175 16 C -0.079 4.079 17 C -0.139 4.139 18 C -0.183 4.183 19 O -0.334 6.334 20 Si 0.587 3.413 21 C -0.049 4.049 22 C -0.181 4.181 23 H 0.096 0.904 24 H 0.095 0.905 25 H 0.120 0.880 26 H 0.102 0.898 27 H 0.102 0.898 28 H 0.097 0.903 29 H 0.118 0.882 30 H 0.237 0.763 31 H 0.168 0.832 32 H 0.160 0.840 33 H 0.141 0.859 34 H 0.226 0.774 35 H -0.179 1.179 36 H -0.182 1.182 37 H 0.156 0.844 38 H 0.113 0.887 39 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 0.664 -2.487 -2.841 3.833 hybrid contribution -1.224 1.976 -0.601 2.400 sum -0.560 -0.511 -3.441 3.524 Atomic orbital electron populations 1.23394 0.94030 1.06733 1.04946 1.87025 1.07530 1.11215 1.98049 1.23425 0.99279 0.94588 1.05053 1.22386 0.92657 0.97481 0.98997 0.88331 1.23403 0.97778 0.96304 1.00040 1.21871 0.82541 0.97602 0.96530 0.87367 1.45524 1.06136 1.61782 1.22530 1.17961 0.83117 0.79038 0.84985 1.90873 1.86515 1.42247 1.19719 1.20052 0.93164 1.07279 0.97400 1.17756 0.93051 0.93079 0.81375 1.91633 1.97038 1.79860 1.40308 1.21170 0.97802 1.01609 0.96944 1.21154 0.97777 0.95300 0.93666 1.20263 0.93239 1.02357 0.98026 1.25026 1.13521 0.94702 0.85096 1.86621 1.54387 1.35082 1.57339 0.94937 0.74461 0.85750 0.86147 1.21027 0.98768 0.93178 0.91927 1.23536 0.98457 0.99747 0.96322 0.90439 0.90467 0.87969 0.89787 0.89837 0.90325 0.88200 0.76325 0.83234 0.84039 0.85924 0.77450 1.17854 1.18238 0.84397 0.88701 0.90500 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.15 10.76 101.05 1.09 1.24 16 2 S -0.26 -0.21 22.37 -107.50 -2.40 -2.62 16 3 C -0.08 0.10 5.78 37.16 0.21 0.32 16 4 C -0.10 0.17 3.54 -89.80 -0.32 -0.15 16 5 H 0.10 -0.15 8.13 -51.93 -0.42 -0.57 16 6 C -0.14 0.33 7.38 -25.92 -0.19 0.14 16 7 C 0.12 -0.04 4.33 -67.02 -0.29 -0.33 16 8 H 0.11 0.15 7.47 -51.93 -0.39 -0.24 16 9 N -0.71 0.11 5.22 -53.91 -0.28 -0.17 16 10 C 0.56 1.67 7.77 -12.39 -0.10 1.57 16 11 O -0.52 -3.65 14.94 5.31 0.08 -3.57 16 12 C -0.17 -0.22 5.88 -104.91 -0.62 -0.84 16 13 C 0.17 0.33 7.29 -38.96 -0.28 0.05 16 14 F -0.11 -0.53 15.55 2.25 0.04 -0.50 16 15 C -0.16 0.14 10.01 -39.56 -0.40 -0.25 16 16 C -0.06 0.14 8.66 -39.51 -0.34 -0.20 16 17 C -0.14 0.28 5.35 -104.68 -0.56 -0.28 16 18 C -0.07 0.19 2.80 36.01 0.10 0.29 16 19 O -0.53 0.59 12.83 -35.23 -0.45 0.13 16 20 Si 0.69 -1.99 29.87 -169.99 -5.08 -7.06 16 21 C -0.03 0.04 9.17 -39.19 -0.36 -0.32 16 22 C -0.14 0.09 7.44 -25.82 -0.19 -0.10 16 23 H 0.08 -0.14 8.14 -51.92 -0.42 -0.56 16 24 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 25 H 0.10 -0.16 8.14 -51.92 -0.42 -0.59 16 26 H 0.08 -0.15 7.84 -51.93 -0.41 -0.56 16 27 H 0.08 -0.16 8.14 -51.92 -0.42 -0.58 16 28 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 29 H 0.10 -0.31 8.10 -51.93 -0.42 -0.73 16 30 H 0.40 -1.03 6.74 -40.82 -0.27 -1.30 16 31 H 0.15 -0.42 8.06 -52.49 -0.42 -0.84 16 32 H 0.14 -0.62 4.82 -52.49 -0.25 -0.87 16 33 H 0.12 -0.42 7.96 -51.93 -0.41 -0.84 16 34 H 0.38 -1.41 8.70 45.56 0.40 -1.01 16 35 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 36 H -0.26 0.30 7.00 56.52 0.40 0.69 16 37 H 0.14 -0.44 6.41 -52.49 -0.34 -0.77 16 38 H 0.09 -0.09 7.90 -51.93 -0.41 -0.50 16 39 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 LS Contribution 341.99 15.07 5.15 5.15 Total: 0.00 -7.86 341.99 -10.28 -18.15 By element: Atomic # 1 Polarization: -5.56 SS G_CDS: -5.09 Total: -10.65 kcal Atomic # 6 Polarization: 3.37 SS G_CDS: -2.24 Total: 1.13 kcal Atomic # 7 Polarization: 0.11 SS G_CDS: -0.28 Total: -0.17 kcal Atomic # 8 Polarization: -3.06 SS G_CDS: -0.37 Total: -3.43 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.04 Total: -0.50 kcal Atomic # 14 Polarization: -1.99 SS G_CDS: -5.08 Total: -7.06 kcal Atomic # 16 Polarization: -0.21 SS G_CDS: -2.40 Total: -2.62 kcal Total LS contribution 5.15 Total: 5.15 kcal Total: -7.86 -10.28 -18.15 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535148_12335834.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.300 kcal (2) G-P(sol) polarization free energy of solvation -7.863 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.163 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.282 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.145 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.446 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds