Wall clock time and date at job start Tue Mar 9 2021 13:06:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81401 * 1 3 3 C 1.81400 * 102.99788 * 2 1 4 4 C 1.53003 * 109.46805 * 180.02562 * 3 2 1 5 5 H 1.09002 * 112.85017 * 45.33274 * 4 3 2 6 6 C 1.53786 * 113.61503 * 176.52892 * 4 3 2 7 7 C 1.53783 * 87.08050 * 140.06140 * 6 4 3 8 8 H 1.08993 * 113.61424 * 220.01734 * 7 6 4 9 9 N 1.46503 * 113.61007 * 89.11544 * 7 6 4 10 10 C 1.34778 * 119.99418 * 154.99668 * 9 7 6 11 11 O 1.21551 * 120.00371 * 0.02562 * 10 9 7 12 12 C 1.47848 * 119.99719 * 180.02562 * 10 9 7 13 13 C 1.39545 * 120.14098 * 0.02562 * 12 10 9 14 14 C 1.38072 * 119.84598 * 180.02562 * 13 12 10 15 15 Br 1.89098 * 119.94068 * 179.97438 * 14 13 12 16 16 C 1.38422 * 120.12108 * 359.97438 * 14 13 12 17 17 C 1.38365 * 120.28531 * 0.02562 * 16 14 13 18 18 C 1.50698 * 119.92243 * 179.97438 * 17 16 14 19 19 O 1.42906 * 109.47039 * 120.00065 * 18 17 16 20 20 Si 1.86299 * 109.47310 * 0.02562 * 18 17 16 21 21 C 1.37939 * 120.15493 * 359.71768 * 17 16 14 22 22 C 1.53781 * 113.61337 * 274.13685 * 4 3 2 23 23 H 1.09000 * 109.46798 * 299.99700 * 1 2 3 24 24 H 1.09002 * 109.47445 * 59.99511 * 1 2 3 25 25 H 1.08997 * 109.47042 * 179.97438 * 1 2 3 26 26 H 1.08997 * 109.47283 * 60.00606 * 3 2 1 27 27 H 1.09004 * 109.47363 * 299.99777 * 3 2 1 28 28 H 1.08992 * 113.61675 * 254.61398 * 6 4 3 29 29 H 1.09000 * 113.60973 * 25.51686 * 6 4 3 30 30 H 0.96995 * 120.00321 * 335.00748 * 9 7 6 31 31 H 1.08005 * 120.07547 * 0.02562 * 13 12 10 32 32 H 1.08006 * 119.85683 * 179.97438 * 16 14 13 33 33 H 1.09001 * 109.47296 * 239.99948 * 18 17 16 34 34 H 0.96695 * 113.99775 * 180.02562 * 19 18 17 35 35 H 1.48508 * 109.99789 * 298.67883 * 20 18 17 36 36 H 1.48498 * 110.00095 * 59.99533 * 20 18 17 37 37 H 1.07996 * 120.06542 * 180.28296 * 21 17 16 38 38 H 1.08999 * 113.61567 * 334.48261 * 22 4 3 39 39 H 1.08998 * 113.61196 * 105.38615 * 22 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2220 1.7675 0.0000 4 6 3.7423 1.9399 -0.0006 5 1 4.2421 1.2861 -0.7153 6 6 4.1959 3.4069 -0.0860 7 6 5.2916 3.0451 0.9305 8 1 5.4594 3.8145 1.6841 9 7 6.5328 2.5723 0.3121 10 6 7.7028 2.6960 0.9695 11 8 7.7282 3.1993 2.0757 12 6 8.9554 2.2194 0.3453 13 6 8.9297 1.6416 -0.9247 14 6 10.1031 1.1982 -1.5017 15 35 10.0712 0.4141 -3.2222 16 6 11.3027 1.3264 -0.8231 17 6 11.3342 1.8985 0.4363 18 6 12.6447 2.0336 1.1680 19 8 12.8999 3.4137 1.4372 20 14 14.0178 1.3427 0.1154 21 6 10.1697 2.3503 1.0215 22 6 4.3664 1.9082 1.4045 23 1 -0.3633 0.5138 0.8900 24 1 -0.3634 0.5139 -0.8899 25 1 -0.3633 -1.0276 -0.0005 26 1 1.8032 2.2371 0.8900 27 1 1.8031 2.2372 -0.8900 28 1 4.5840 3.6877 -1.0650 29 1 3.4607 4.1142 0.2978 30 1 6.5124 2.1705 -0.5705 31 1 7.9941 1.5416 -1.4550 32 1 12.2179 0.9777 -1.2784 33 1 12.5946 1.4834 2.1076 34 1 13.7293 3.5759 1.9071 35 1 13.7808 -0.1000 -0.1456 36 1 14.0963 2.0849 -1.1684 37 1 10.1966 2.8008 2.0027 38 1 3.6778 2.2066 2.1949 39 1 4.8922 0.9799 1.6278 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535148_12335870.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:49 Heat of formation + Delta-G solvation = -8.884980 kcal Electronic energy + Delta-G solvation = -22592.340825 eV Core-core repulsion = 19060.871216 eV Total energy + Delta-G solvation = -3531.469609 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.018 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -41.75203 -40.63186 -39.21344 -37.70466 -34.93327 -33.70656 -33.10496 -30.66908 -30.52112 -29.74453 -27.06889 -26.85238 -25.75129 -23.70590 -22.71874 -21.68524 -20.40452 -18.95012 -18.55106 -17.84980 -17.44570 -17.30698 -16.64542 -16.32289 -16.19184 -15.92157 -15.57304 -15.25577 -15.11755 -15.02597 -14.83403 -14.45339 -14.33309 -14.18562 -13.99994 -13.68164 -13.62805 -13.41984 -12.94500 -12.70233 -12.46590 -12.21660 -12.12426 -11.92525 -11.63107 -11.54116 -11.34118 -11.07770 -10.94469 -10.58558 -10.29466 -10.11349 -9.93996 -8.67557 -5.09852 -0.55114 -0.20337 0.34841 0.65436 1.12158 1.49697 1.57496 1.58691 1.83115 1.90538 2.45374 3.06493 3.26061 3.33144 3.41597 3.52907 3.58633 3.66503 3.70766 3.82883 3.93131 4.07265 4.12332 4.14146 4.18497 4.23173 4.27066 4.39613 4.41954 4.58680 4.61438 4.67000 4.71800 4.72984 4.88484 4.91568 4.95588 5.02160 5.05848 5.33245 5.47344 6.31174 6.49918 7.05473 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.264 6.264 3 C -0.075 4.075 4 C -0.097 4.097 5 H 0.098 0.902 6 C -0.135 4.135 7 C 0.119 3.881 8 H 0.109 0.891 9 N -0.708 5.708 10 C 0.566 3.434 11 O -0.523 6.523 12 C -0.127 4.127 13 C -0.054 4.054 14 C -0.093 4.093 15 Br -0.032 7.032 16 C -0.071 4.071 17 C -0.074 4.074 18 C -0.072 4.072 19 O -0.543 6.543 20 Si 0.681 3.319 21 C -0.013 4.013 22 C -0.142 4.142 23 H 0.077 0.923 24 H 0.076 0.924 25 H 0.102 0.898 26 H 0.084 0.916 27 H 0.083 0.917 28 H 0.078 0.922 29 H 0.100 0.900 30 H 0.401 0.599 31 H 0.140 0.860 32 H 0.134 0.866 33 H 0.083 0.917 34 H 0.386 0.614 35 H -0.250 1.250 36 H -0.246 1.246 37 H 0.151 0.849 38 H 0.095 0.905 39 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.533 0.150 -0.157 0.576 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.038 6.038 3 C -0.223 4.223 4 C -0.116 4.116 5 H 0.116 0.884 6 C -0.175 4.175 7 C 0.014 3.986 8 H 0.127 0.873 9 N -0.360 5.360 10 C 0.353 3.647 11 O -0.399 6.399 12 C -0.131 4.131 13 C -0.074 4.074 14 C -0.172 4.172 15 Br 0.054 6.946 16 C -0.090 4.090 17 C -0.075 4.075 18 C -0.183 4.183 19 O -0.350 6.350 20 Si 0.582 3.418 21 C -0.032 4.032 22 C -0.181 4.181 23 H 0.096 0.904 24 H 0.095 0.905 25 H 0.120 0.880 26 H 0.102 0.898 27 H 0.102 0.898 28 H 0.097 0.903 29 H 0.119 0.881 30 H 0.237 0.763 31 H 0.157 0.843 32 H 0.151 0.849 33 H 0.101 0.899 34 H 0.235 0.765 35 H -0.175 1.175 36 H -0.170 1.170 37 H 0.168 0.832 38 H 0.114 0.886 39 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 0.811 -0.982 -1.080 1.670 hybrid contribution -1.546 0.885 -0.061 1.783 sum -0.735 -0.097 -1.140 1.360 Atomic orbital electron populations 1.23395 0.94007 1.06740 1.04954 1.87040 1.07548 1.11200 1.98051 1.23423 0.99258 0.94597 1.05066 1.22397 0.92680 0.97447 0.99066 0.88365 1.23402 0.97726 0.96235 1.00148 1.21909 0.82595 0.97586 0.96516 0.87282 1.45562 1.06257 1.62940 1.21206 1.18043 0.83042 0.78453 0.85144 1.90821 1.86544 1.43396 1.19182 1.19948 0.94351 1.03573 0.95192 1.21269 0.97379 0.94932 0.93858 1.21579 0.95662 1.05496 0.94493 1.96835 1.99207 1.81018 1.17543 1.21072 0.96834 0.97454 0.93639 1.19335 0.94732 0.99618 0.93803 1.24656 1.00241 0.88477 1.04923 1.86488 1.45780 1.21912 1.80808 0.95053 0.85915 0.79622 0.81225 1.21273 0.89443 0.92392 1.00102 1.23549 0.98414 0.99671 0.96419 0.90424 0.90462 0.87969 0.89773 0.89827 0.90288 0.88130 0.76340 0.84254 0.84878 0.89929 0.76537 1.17473 1.17024 0.83156 0.88630 0.90503 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.15 10.76 101.05 1.09 1.23 16 2 S -0.26 -0.22 22.38 -107.50 -2.41 -2.63 16 3 C -0.08 0.11 5.76 37.16 0.21 0.32 16 4 C -0.10 0.18 3.52 -89.80 -0.32 -0.14 16 5 H 0.10 -0.15 8.14 -51.93 -0.42 -0.57 16 6 C -0.14 0.35 7.39 -25.92 -0.19 0.16 16 7 C 0.12 -0.07 4.33 -66.97 -0.29 -0.36 16 8 H 0.11 0.10 7.47 -51.93 -0.39 -0.29 16 9 N -0.71 0.19 5.21 -53.82 -0.28 -0.09 16 10 C 0.57 1.47 7.77 -12.33 -0.10 1.37 16 11 O -0.52 -3.18 15.95 5.32 0.08 -3.09 16 12 C -0.13 -0.23 5.87 -104.97 -0.62 -0.84 16 13 C -0.05 -0.02 9.28 -39.15 -0.36 -0.38 16 14 C -0.09 -0.13 6.22 -39.57 -0.25 -0.38 16 15 Br -0.03 -0.03 33.69 -68.01 -2.29 -2.32 16 16 C -0.07 -0.13 8.41 -39.47 -0.33 -0.46 16 17 C -0.07 -0.12 5.42 -104.69 -0.57 -0.69 16 18 C -0.07 0.05 2.81 36.00 0.10 0.15 16 19 O -0.54 0.19 12.74 -35.23 -0.45 -0.26 16 20 Si 0.68 -1.12 29.78 -169.99 -5.06 -6.18 16 21 C -0.01 -0.03 9.15 -39.18 -0.36 -0.39 16 22 C -0.14 0.11 7.45 -25.78 -0.19 -0.08 16 23 H 0.08 -0.14 8.14 -51.92 -0.42 -0.56 16 24 H 0.08 -0.14 8.14 -51.92 -0.42 -0.57 16 25 H 0.10 -0.16 8.14 -51.93 -0.42 -0.58 16 26 H 0.08 -0.16 7.88 -51.93 -0.41 -0.57 16 27 H 0.08 -0.17 8.14 -51.92 -0.42 -0.59 16 28 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 29 H 0.10 -0.33 8.10 -51.93 -0.42 -0.75 16 30 H 0.40 -1.00 6.74 -40.82 -0.27 -1.28 16 31 H 0.14 -0.31 6.40 -52.48 -0.34 -0.64 16 32 H 0.13 0.19 4.86 -52.48 -0.26 -0.07 16 33 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 34 H 0.39 -2.09 8.74 45.56 0.40 -1.69 16 35 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 36 H -0.25 -0.36 7.11 56.52 0.40 0.04 16 37 H 0.15 0.39 7.65 -52.49 -0.40 -0.01 16 38 H 0.10 -0.11 7.92 -51.93 -0.41 -0.52 16 39 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 LS Contribution 358.80 15.07 5.41 5.41 Total: 0.00 -7.46 358.80 -12.23 -19.69 By element: Atomic # 1 Polarization: -4.97 SS G_CDS: -5.07 Total: -10.04 kcal Atomic # 6 Polarization: 1.68 SS G_CDS: -2.17 Total: -0.48 kcal Atomic # 7 Polarization: 0.19 SS G_CDS: -0.28 Total: -0.09 kcal Atomic # 8 Polarization: -2.99 SS G_CDS: -0.36 Total: -3.35 kcal Atomic # 14 Polarization: -1.12 SS G_CDS: -5.06 Total: -6.18 kcal Atomic # 16 Polarization: -0.22 SS G_CDS: -2.41 Total: -2.63 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -2.29 Total: -2.32 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -7.46 -12.23 -19.69 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535148_12335870.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.800 kcal (2) G-P(sol) polarization free energy of solvation -7.455 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.345 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.230 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.685 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.885 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds