Wall clock time and date at job start Tue Mar 9 2021 13:06:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81400 * 1 3 3 C 1.81406 * 102.99738 * 2 1 4 4 C 1.53003 * 109.47020 * 179.97438 * 3 2 1 5 5 H 1.09000 * 112.85216 * 316.19671 * 4 3 2 6 6 C 1.53777 * 113.69093 * 87.46415 * 4 3 2 7 7 C 1.53774 * 87.08381 * 139.99070 * 6 4 3 8 8 H 1.08997 * 113.69521 * 220.00978 * 7 6 4 9 9 N 1.46505 * 113.61385 * 89.11575 * 7 6 4 10 10 C 1.34777 * 119.99724 * 107.50723 * 9 7 6 11 11 O 1.21693 * 120.00201 * 359.97438 * 10 9 7 12 12 C 1.46425 * 119.99668 * 179.97438 * 10 9 7 13 13 C 1.34808 * 119.99920 * 179.97438 * 12 10 9 14 14 C 1.47207 * 120.00030 * 179.72181 * 13 12 10 15 15 C 1.39838 * 120.16801 * 0.02562 * 14 13 12 16 16 C 1.37891 * 119.82419 * 179.78322 * 15 14 13 17 17 C 1.38401 * 120.17304 * 0.47020 * 16 15 14 18 18 C 1.50696 * 119.83283 * 179.75847 * 17 16 15 19 19 O 1.42897 * 109.47763 * 245.02548 * 18 17 16 20 20 Si 1.86301 * 109.46839 * 5.02561 * 18 17 16 21 21 C 1.38401 * 120.34512 * 359.78431 * 17 16 15 22 22 C 1.37895 * 120.17104 * 359.97438 * 21 17 16 23 23 C 1.53783 * 113.61410 * 185.00117 * 4 3 2 24 24 H 1.08998 * 109.47178 * 299.99498 * 1 2 3 25 25 H 1.08991 * 109.47187 * 60.00554 * 1 2 3 26 26 H 1.09000 * 109.46426 * 180.02562 * 1 2 3 27 27 H 1.08997 * 109.47252 * 60.00367 * 3 2 1 28 28 H 1.08998 * 109.46964 * 299.99963 * 3 2 1 29 29 H 1.09001 * 113.61290 * 25.44330 * 6 4 3 30 30 H 1.09000 * 113.61684 * 254.54352 * 6 4 3 31 31 H 0.97000 * 119.99792 * 287.50291 * 9 7 6 32 32 H 1.08001 * 120.00362 * 0.02562 * 12 10 9 33 33 H 1.08002 * 120.00248 * 0.02562 * 13 12 10 34 34 H 1.07992 * 120.08796 * 0.02562 * 15 14 13 35 35 H 1.08006 * 119.91926 * 180.22743 * 16 15 14 36 36 H 1.09005 * 109.47250 * 125.02193 * 18 17 16 37 37 H 0.96696 * 114.00073 * 59.99295 * 19 18 17 38 38 H 1.48502 * 110.00141 * 58.67676 * 20 18 17 39 39 H 1.48507 * 110.00224 * 179.97438 * 20 18 17 40 40 H 1.07997 * 119.92055 * 179.97438 * 21 17 16 41 41 H 1.07999 * 120.08848 * 179.97438 * 22 21 17 42 42 H 1.08989 * 113.61450 * 105.38610 * 23 4 3 43 43 H 1.09002 * 113.69000 * 334.48924 * 23 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2220 1.7676 0.0000 4 6 3.7423 1.9401 0.0006 5 1 4.2443 1.2675 0.6962 6 6 4.3638 1.9477 -1.4059 7 6 5.2888 3.0696 -0.9055 8 1 5.4553 3.8594 -1.6380 9 7 6.5318 2.5808 -0.3036 10 6 7.6999 2.7220 -0.9610 11 8 7.7220 3.2550 -2.0548 12 6 8.9423 2.2339 -0.3592 13 6 10.1105 2.3746 -1.0169 14 6 11.3605 1.8894 -0.4092 15 6 11.3399 1.2816 0.8500 16 6 12.5143 0.8257 1.4107 17 6 13.7125 0.9771 0.7349 18 6 14.9922 0.4810 1.3572 19 8 15.8502 1.5903 1.6311 20 14 14.6047 -0.4115 2.9459 21 6 13.7418 1.5824 -0.5094 22 6 12.5752 2.0391 -1.0856 23 6 4.1961 3.4043 0.1235 24 1 -0.3633 0.5137 0.8900 25 1 -0.3633 0.5137 -0.8900 26 1 -0.3632 -1.0277 0.0005 27 1 1.8031 2.2372 0.8900 28 1 1.8030 2.2371 -0.8900 29 1 3.6734 2.2667 -2.1867 30 1 4.8903 1.0265 -1.6556 31 1 6.5141 2.1556 0.5681 32 1 8.9226 1.7604 0.6114 33 1 10.1302 2.8476 -1.9876 34 1 10.4062 1.1660 1.3803 35 1 12.4997 0.3527 2.3816 36 1 15.4900 -0.2021 0.6689 37 1 15.4709 2.2403 2.2383 38 1 13.6874 -1.5485 2.6791 39 1 15.8584 -0.9064 3.5694 40 1 14.6807 1.6974 -1.0306 41 1 12.5996 2.5116 -2.0564 42 1 4.5871 3.6590 1.1085 43 1 3.4606 4.1226 -0.2387 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535148_12360594.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:55 Heat of formation + Delta-G solvation = -2.586323 kcal Electronic energy + Delta-G solvation = -22837.064227 eV Core-core repulsion = 19361.921991 eV Total energy + Delta-G solvation = -3475.142236 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.123 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -41.32220 -40.68209 -39.43848 -37.81004 -35.07720 -34.59027 -32.29446 -31.45420 -30.57177 -29.73659 -27.23212 -26.81641 -24.74783 -24.08593 -23.39052 -22.15575 -20.54174 -20.26332 -18.90727 -18.16588 -17.38697 -17.27927 -16.81173 -16.58202 -16.31160 -16.11751 -16.00706 -15.60560 -15.37161 -15.16375 -15.07322 -14.83792 -14.62167 -14.40156 -14.17976 -13.99533 -13.87821 -13.65759 -13.41232 -13.34132 -13.04336 -12.90655 -12.27009 -12.17988 -12.07593 -11.78518 -11.59331 -11.36578 -11.29485 -10.94333 -10.92709 -10.49143 -10.07676 -10.06485 -9.30500 -8.66813 -5.09555 -0.58926 0.30659 0.66533 0.88102 1.22738 1.58268 1.59556 1.92683 2.11605 2.26975 2.75591 3.34632 3.38033 3.44964 3.49965 3.58635 3.63867 3.72494 3.76623 3.81385 4.09465 4.13816 4.14572 4.14991 4.20230 4.24926 4.29638 4.35930 4.43076 4.46461 4.61901 4.64599 4.72938 4.74794 4.78350 4.88617 4.94333 4.99290 5.01811 5.08828 5.10518 5.31441 5.40593 5.54322 5.57475 5.81187 6.49254 6.50353 7.24391 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.265 6.265 3 C -0.075 4.075 4 C -0.095 4.095 5 H 0.099 0.901 6 C -0.143 4.143 7 C 0.120 3.880 8 H 0.106 0.894 9 N -0.709 5.709 10 C 0.551 3.449 11 O -0.541 6.541 12 C -0.215 4.215 13 C -0.014 4.014 14 C -0.073 4.073 15 C -0.095 4.095 16 C -0.118 4.118 17 C -0.108 4.108 18 C -0.071 4.071 19 O -0.539 6.539 20 Si 0.686 3.314 21 C -0.095 4.095 22 C -0.092 4.092 23 C -0.136 4.136 24 H 0.076 0.924 25 H 0.077 0.923 26 H 0.101 0.899 27 H 0.083 0.917 28 H 0.083 0.917 29 H 0.093 0.907 30 H 0.075 0.925 31 H 0.402 0.598 32 H 0.131 0.869 33 H 0.138 0.862 34 H 0.132 0.868 35 H 0.130 0.870 36 H 0.115 0.885 37 H 0.380 0.620 38 H -0.257 1.257 39 H -0.254 1.254 40 H 0.130 0.870 41 H 0.132 0.868 42 H 0.078 0.922 43 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.955 1.383 4.541 5.591 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.039 6.039 3 C -0.223 4.223 4 C -0.115 4.115 5 H 0.117 0.883 6 C -0.181 4.181 7 C 0.014 3.986 8 H 0.124 0.876 9 N -0.360 5.360 10 C 0.340 3.660 11 O -0.420 6.420 12 C -0.235 4.235 13 C -0.034 4.034 14 C -0.073 4.073 15 C -0.113 4.113 16 C -0.135 4.135 17 C -0.108 4.108 18 C -0.182 4.182 19 O -0.344 6.344 20 Si 0.588 3.412 21 C -0.113 4.113 22 C -0.110 4.110 23 C -0.175 4.175 24 H 0.095 0.905 25 H 0.096 0.904 26 H 0.120 0.880 27 H 0.102 0.898 28 H 0.102 0.898 29 H 0.112 0.888 30 H 0.094 0.906 31 H 0.237 0.763 32 H 0.149 0.851 33 H 0.156 0.844 34 H 0.150 0.850 35 H 0.148 0.852 36 H 0.132 0.868 37 H 0.227 0.773 38 H -0.182 1.182 39 H -0.179 1.179 40 H 0.148 0.852 41 H 0.150 0.850 42 H 0.097 0.903 43 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -1.866 -0.207 3.797 4.236 hybrid contribution -0.983 0.667 -0.166 1.200 sum -2.849 0.461 3.631 4.639 Atomic orbital electron populations 1.23392 0.94029 1.06728 1.04946 1.87033 1.07535 1.11291 1.98050 1.23429 0.99353 0.94518 1.05025 1.22383 0.92560 0.97514 0.99023 0.88330 1.23501 0.98511 0.99828 0.96299 1.21805 0.82925 0.97454 0.96426 0.87576 1.45542 1.06292 1.61687 1.22474 1.18333 0.83925 0.78703 0.84990 1.90837 1.87059 1.43572 1.20493 1.22874 0.92417 1.06203 1.02027 1.22414 0.90422 0.91981 0.98582 1.19068 0.93099 1.00239 0.94904 1.21361 0.98379 0.97026 0.94558 1.20933 0.92256 1.00697 0.99633 1.20525 0.95115 0.99434 0.95752 1.25103 0.90545 0.94215 1.08315 1.86519 1.43042 1.35285 1.69551 0.94785 0.81751 0.83306 0.81329 1.21000 0.98469 0.97187 0.94604 1.21472 0.91491 0.98231 0.99796 1.23397 0.97848 0.96208 1.00090 0.90465 0.90436 0.87982 0.89847 0.89820 0.88833 0.90597 0.76312 0.85137 0.84432 0.85017 0.85236 0.86791 0.77311 1.18189 1.17884 0.85195 0.85032 0.90341 0.88338 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.16 10.76 101.05 1.09 1.25 16 2 S -0.27 -0.20 22.37 -107.50 -2.40 -2.60 16 3 C -0.08 0.11 5.78 37.16 0.21 0.33 16 4 C -0.10 0.18 3.53 -89.81 -0.32 -0.13 16 5 H 0.10 -0.17 8.13 -51.93 -0.42 -0.59 16 6 C -0.14 0.10 7.43 -25.92 -0.19 -0.09 16 7 C 0.12 -0.07 4.32 -67.12 -0.29 -0.36 16 8 H 0.11 0.12 7.46 -51.93 -0.39 -0.26 16 9 N -0.71 0.55 5.26 -54.41 -0.29 0.27 16 10 C 0.55 1.02 7.74 -12.96 -0.10 0.92 16 11 O -0.54 -3.21 15.83 5.20 0.08 -3.13 16 12 C -0.21 0.09 9.41 -37.50 -0.35 -0.27 16 13 C -0.01 0.00 9.46 -37.16 -0.35 -0.36 16 14 C -0.07 0.01 5.87 -105.06 -0.62 -0.61 16 15 C -0.10 0.11 9.41 -39.11 -0.37 -0.26 16 16 C -0.12 0.15 8.65 -39.65 -0.34 -0.19 16 17 C -0.11 0.04 5.36 -104.50 -0.56 -0.52 16 18 C -0.07 0.05 2.80 36.00 0.10 0.15 16 19 O -0.54 0.06 12.83 -35.23 -0.45 -0.39 16 20 Si 0.69 -1.02 29.78 -169.99 -5.06 -6.08 16 21 C -0.09 -0.01 9.66 -39.65 -0.38 -0.39 16 22 C -0.09 0.01 9.80 -39.11 -0.38 -0.37 16 23 C -0.14 0.36 7.39 -25.92 -0.19 0.17 16 24 H 0.08 -0.15 8.14 -51.92 -0.42 -0.58 16 25 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 26 H 0.10 -0.17 8.14 -51.92 -0.42 -0.59 16 27 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 28 H 0.08 -0.16 7.85 -51.93 -0.41 -0.56 16 29 H 0.09 -0.09 7.90 -51.93 -0.41 -0.50 16 30 H 0.08 0.06 8.14 -51.93 -0.42 -0.37 16 31 H 0.40 -1.36 8.68 -40.82 -0.35 -1.72 16 32 H 0.13 -0.42 6.07 -52.49 -0.32 -0.74 16 33 H 0.14 0.13 7.52 -52.49 -0.39 -0.27 16 34 H 0.13 -0.45 6.17 -52.49 -0.32 -0.77 16 35 H 0.13 -0.43 4.88 -52.48 -0.26 -0.68 16 36 H 0.11 -0.02 7.96 -51.93 -0.41 -0.43 16 37 H 0.38 -1.51 8.70 45.56 0.40 -1.11 16 38 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 39 H -0.25 -0.49 7.11 56.52 0.40 -0.09 16 40 H 0.13 -0.06 8.06 -52.49 -0.42 -0.48 16 41 H 0.13 -0.19 8.06 -52.49 -0.42 -0.62 16 42 H 0.08 -0.25 8.14 -51.94 -0.42 -0.67 16 43 H 0.10 -0.32 8.10 -51.93 -0.42 -0.74 16 LS Contribution 372.05 15.07 5.61 5.61 Total: 0.00 -7.98 372.05 -11.86 -19.84 By element: Atomic # 1 Polarization: -6.47 SS G_CDS: -6.29 Total: -12.76 kcal Atomic # 6 Polarization: 2.30 SS G_CDS: -3.05 Total: -0.74 kcal Atomic # 7 Polarization: 0.55 SS G_CDS: -0.29 Total: 0.27 kcal Atomic # 8 Polarization: -3.16 SS G_CDS: -0.37 Total: -3.53 kcal Atomic # 14 Polarization: -1.02 SS G_CDS: -5.06 Total: -6.08 kcal Atomic # 16 Polarization: -0.20 SS G_CDS: -2.40 Total: -2.60 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -7.98 -11.86 -19.84 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535148_12360594.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.256 kcal (2) G-P(sol) polarization free energy of solvation -7.985 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.271 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.857 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.842 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.586 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds