Wall clock time and date at job start Tue Mar 9 2021 13:07:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81394 * 1 3 3 C 1.81403 * 103.00185 * 2 1 4 4 C 1.53002 * 109.47264 * 180.02562 * 3 2 1 5 5 H 1.09005 * 112.84505 * 316.19215 * 4 3 2 6 6 C 1.53775 * 113.61647 * 87.50062 * 4 3 2 7 7 C 1.53781 * 87.08009 * 139.98169 * 6 4 3 8 8 H 1.09007 * 113.68514 * 220.00991 * 7 6 4 9 9 N 1.46499 * 113.61527 * 89.11759 * 7 6 4 10 10 C 1.34776 * 119.99718 * 107.50329 * 9 7 6 11 11 O 1.21560 * 120.00215 * 359.97438 * 10 9 7 12 12 C 1.47731 * 119.99504 * 180.02562 * 10 9 7 13 13 C 1.39639 * 120.11659 * 180.29188 * 12 10 9 14 14 C 1.37854 * 119.87793 * 180.24975 * 13 12 10 15 15 C 1.50696 * 119.93689 * 179.75349 * 14 13 12 16 16 O 1.42903 * 109.47131 * 254.72074 * 15 14 13 17 17 Si 1.86305 * 109.47185 * 134.72615 * 15 14 13 18 18 C 1.38637 * 120.11751 * 359.47982 * 14 13 12 19 19 F 1.35103 * 119.87874 * 180.25556 * 18 14 13 20 20 C 1.38672 * 120.24058 * 0.22527 * 18 14 13 21 21 C 1.37819 * 120.11907 * 0.05366 * 20 18 14 22 22 C 1.53782 * 87.08300 * 334.56507 * 7 6 4 23 23 H 1.09001 * 109.47260 * 299.99908 * 1 2 3 24 24 H 1.08992 * 109.47306 * 59.99931 * 1 2 3 25 25 H 1.09003 * 109.47296 * 180.02562 * 1 2 3 26 26 H 1.08997 * 109.46754 * 60.00049 * 3 2 1 27 27 H 1.09002 * 109.46719 * 300.00410 * 3 2 1 28 28 H 1.09003 * 113.61099 * 25.43171 * 6 4 3 29 29 H 1.09001 * 113.61605 * 254.53421 * 6 4 3 30 30 H 0.97000 * 119.99757 * 287.50407 * 9 7 6 31 31 H 1.08000 * 120.05644 * 0.02562 * 13 12 10 32 32 H 1.08999 * 109.47358 * 14.72434 * 15 14 13 33 33 H 0.96700 * 114.00311 * 300.00591 * 16 15 14 34 34 H 1.48497 * 110.00233 * 179.97438 * 17 15 14 35 35 H 1.48492 * 109.99800 * 301.31995 * 17 15 14 36 36 H 1.07997 * 119.94244 * 180.02562 * 20 18 14 37 37 H 1.07998 * 120.06034 * 179.97438 * 21 20 18 38 38 H 1.09000 * 113.61636 * 139.97571 * 22 7 6 39 39 H 1.08991 * 113.61699 * 270.88723 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8139 0.0000 0.0000 3 6 2.2221 1.7675 0.0000 4 6 3.7423 1.9399 -0.0006 5 1 4.2448 1.2672 0.6945 6 6 4.3608 1.9485 -1.4085 7 6 5.2868 3.0702 -0.9094 8 1 5.4515 3.8605 -1.6420 9 7 6.5311 2.5811 -0.3106 10 6 7.6977 2.7228 -0.9705 11 8 7.7173 3.2559 -2.0628 12 6 8.9524 2.2290 -0.3669 13 6 10.1633 2.3799 -1.0457 14 6 11.3304 1.9128 -0.4801 15 6 12.6372 2.0699 -1.2140 16 8 13.0365 0.8075 -1.7515 17 14 13.9422 2.6832 -0.0342 18 6 11.3049 1.3038 0.7651 19 9 12.4524 0.8523 1.3171 20 6 10.1060 1.1568 1.4462 21 6 8.9325 1.6151 0.8875 22 6 4.1962 3.4042 0.1221 23 1 -0.3634 0.5138 0.8900 24 1 -0.3633 0.5138 -0.8899 25 1 -0.3634 -1.0277 0.0005 26 1 1.8031 2.2371 0.8900 27 1 1.8031 2.2371 -0.8900 28 1 3.6685 2.2679 -2.1876 29 1 4.8868 1.0275 -1.6600 30 1 6.5153 2.1554 0.5608 31 1 10.1848 2.8585 -2.0136 32 1 12.5144 2.7877 -2.0250 33 1 13.1647 0.1189 -1.0847 34 1 15.2360 2.8418 -0.7456 35 1 13.5242 3.9801 0.5559 36 1 10.0917 0.6820 2.4161 37 1 7.9992 1.4998 1.4186 38 1 4.5894 3.6582 1.1065 39 1 3.4591 4.1215 -0.2384 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535148_12496548.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:04 Heat of formation + Delta-G solvation = -58.425408 kcal Electronic energy + Delta-G solvation = -22983.694446 eV Core-core repulsion = 19320.440630 eV Total energy + Delta-G solvation = -3663.253816 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 312.098 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -50.48552 -41.69704 -40.45069 -39.12718 -37.66640 -34.90586 -32.95272 -32.11122 -30.59030 -29.74633 -27.03999 -26.87622 -25.48271 -23.72774 -23.58435 -21.72538 -20.44524 -19.31081 -18.78756 -17.90866 -17.87569 -17.44325 -17.12115 -16.87655 -16.40426 -16.22210 -16.05007 -15.56139 -15.47151 -15.23720 -15.15279 -15.06888 -14.52568 -14.44941 -14.19067 -14.03754 -13.99185 -13.77056 -13.45948 -13.44999 -13.03221 -12.87177 -12.37450 -12.23884 -11.94612 -11.64758 -11.36339 -11.14019 -10.96879 -10.68682 -10.26497 -10.17690 -9.92957 -8.69428 -4.84051 -0.60131 -0.10577 0.63656 1.20508 1.52660 1.56704 1.66725 1.88467 1.98183 2.48819 2.81174 3.19484 3.27845 3.38832 3.42491 3.44276 3.49952 3.57687 3.68699 3.78033 3.99948 4.10756 4.12589 4.16934 4.21167 4.24990 4.38412 4.47840 4.56204 4.59276 4.64262 4.67995 4.71193 4.73985 4.87782 4.88633 4.93910 4.98462 5.02632 5.41993 5.48753 6.31176 6.44327 7.05862 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.264 6.264 3 C -0.076 4.076 4 C -0.096 4.096 5 H 0.099 0.901 6 C -0.142 4.142 7 C 0.119 3.881 8 H 0.108 0.892 9 N -0.708 5.708 10 C 0.564 3.436 11 O -0.527 6.527 12 C -0.143 4.143 13 C -0.013 4.013 14 C -0.154 4.154 15 C -0.069 4.069 16 O -0.533 6.533 17 Si 0.672 3.328 18 C 0.123 3.877 19 F -0.106 7.106 20 C -0.149 4.149 21 C -0.056 4.056 22 C -0.135 4.135 23 H 0.076 0.924 24 H 0.077 0.923 25 H 0.102 0.898 26 H 0.083 0.917 27 H 0.083 0.917 28 H 0.095 0.905 29 H 0.076 0.924 30 H 0.401 0.599 31 H 0.149 0.851 32 H 0.120 0.880 33 H 0.378 0.622 34 H -0.246 1.246 35 H -0.253 1.253 36 H 0.150 0.850 37 H 0.139 0.861 38 H 0.078 0.922 39 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.594 -0.732 5.535 6.640 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.038 6.038 3 C -0.224 4.224 4 C -0.115 4.115 5 H 0.117 0.883 6 C -0.181 4.181 7 C 0.014 3.986 8 H 0.126 0.874 9 N -0.360 5.360 10 C 0.352 3.648 11 O -0.404 6.404 12 C -0.146 4.146 13 C -0.032 4.032 14 C -0.155 4.155 15 C -0.179 4.179 16 O -0.338 6.338 17 Si 0.573 3.427 18 C 0.103 3.897 19 F -0.085 7.085 20 C -0.167 4.167 21 C -0.075 4.075 22 C -0.175 4.175 23 H 0.095 0.905 24 H 0.096 0.904 25 H 0.120 0.880 26 H 0.102 0.898 27 H 0.102 0.898 28 H 0.113 0.887 29 H 0.095 0.905 30 H 0.237 0.763 31 H 0.166 0.834 32 H 0.138 0.862 33 H 0.225 0.775 34 H -0.171 1.171 35 H -0.178 1.178 36 H 0.168 0.832 37 H 0.157 0.843 38 H 0.097 0.903 39 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -2.362 -0.261 4.385 4.988 hybrid contribution -1.385 0.735 0.197 1.580 sum -3.747 0.475 4.582 5.938 Atomic orbital electron populations 1.23395 0.93987 1.06757 1.04961 1.87027 1.07584 1.11185 1.98050 1.23428 0.99269 0.94614 1.05067 1.22392 0.92684 0.97462 0.98984 0.88333 1.23507 0.98469 0.99772 0.96352 1.21849 0.82615 0.97598 0.96556 0.87378 1.45550 1.06273 1.61659 1.22507 1.18104 0.83205 0.78653 0.84864 1.90821 1.86643 1.42870 1.20063 1.19989 0.94005 1.04274 0.96332 1.21057 0.89115 0.93813 0.99198 1.20362 0.97948 1.02554 0.94652 1.25027 0.97347 0.91046 1.04499 1.86564 1.90077 1.20102 1.37054 0.94604 0.78744 0.84774 0.84627 1.17771 0.82362 0.97577 0.91964 1.91186 1.46711 1.85695 1.84879 1.21085 0.90616 1.03208 1.01830 1.21189 0.98320 0.94431 0.93539 1.23406 0.97785 0.96309 1.00015 0.90458 0.90424 0.87955 0.89823 0.89792 0.88679 0.90489 0.76334 0.83366 0.86212 0.77467 1.17099 1.17752 0.83192 0.84339 0.90301 0.88189 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.19 10.76 101.05 1.09 1.28 16 2 S -0.26 -0.09 22.37 -107.50 -2.40 -2.50 16 3 C -0.08 0.15 5.78 37.16 0.21 0.36 16 4 C -0.10 0.24 3.53 -89.81 -0.32 -0.08 16 5 H 0.10 -0.24 8.13 -51.93 -0.42 -0.66 16 6 C -0.14 0.19 7.43 -25.92 -0.19 0.00 16 7 C 0.12 -0.15 4.32 -67.12 -0.29 -0.44 16 8 H 0.11 0.05 7.46 -51.93 -0.39 -0.34 16 9 N -0.71 0.98 5.21 -53.99 -0.28 0.69 16 10 C 0.56 0.88 7.77 -12.38 -0.10 0.79 16 11 O -0.53 -2.90 15.94 5.31 0.08 -2.82 16 12 C -0.14 -0.02 5.87 -104.96 -0.62 -0.63 16 13 C -0.01 -0.01 9.21 -39.20 -0.36 -0.37 16 14 C -0.15 -0.03 4.78 -104.62 -0.50 -0.53 16 15 C -0.07 -0.03 2.81 36.00 0.10 0.07 16 16 O -0.53 -0.61 12.88 -35.23 -0.45 -1.07 16 17 Si 0.67 0.21 29.57 -169.99 -5.03 -4.82 16 18 C 0.12 -0.13 6.63 -39.27 -0.26 -0.39 16 19 F -0.11 0.20 13.46 2.25 0.03 0.23 16 20 C -0.15 0.38 10.01 -39.57 -0.40 -0.02 16 21 C -0.06 0.14 9.54 -39.20 -0.37 -0.23 16 22 C -0.14 0.44 7.39 -25.92 -0.19 0.25 16 23 H 0.08 -0.18 8.14 -51.92 -0.42 -0.60 16 24 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 25 H 0.10 -0.20 8.14 -51.92 -0.42 -0.62 16 26 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 27 H 0.08 -0.19 7.84 -51.92 -0.41 -0.60 16 28 H 0.09 -0.14 7.90 -51.93 -0.41 -0.55 16 29 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 30 H 0.40 -1.63 6.73 -40.82 -0.27 -1.90 16 31 H 0.15 0.22 7.58 -52.49 -0.40 -0.18 16 32 H 0.12 0.06 7.76 -51.93 -0.40 -0.34 16 33 H 0.38 -0.91 8.41 45.56 0.38 -0.53 16 34 H -0.25 -0.76 7.11 56.52 0.40 -0.35 16 35 H -0.25 -0.68 7.11 56.52 0.40 -0.28 16 36 H 0.15 -0.72 8.06 -52.49 -0.42 -1.14 16 37 H 0.14 -0.77 6.40 -52.49 -0.34 -1.11 16 38 H 0.08 -0.30 8.14 -51.93 -0.42 -0.73 16 39 H 0.10 -0.38 8.10 -51.93 -0.42 -0.80 16 LS Contribution 342.68 15.07 5.16 5.16 Total: 0.00 -7.13 342.68 -10.31 -17.44 By element: Atomic # 1 Polarization: -7.14 SS G_CDS: -5.23 Total: -12.37 kcal Atomic # 6 Polarization: 2.24 SS G_CDS: -2.19 Total: 0.05 kcal Atomic # 7 Polarization: 0.98 SS G_CDS: -0.28 Total: 0.69 kcal Atomic # 8 Polarization: -3.51 SS G_CDS: -0.37 Total: -3.88 kcal Atomic # 9 Polarization: 0.20 SS G_CDS: 0.03 Total: 0.23 kcal Atomic # 14 Polarization: 0.21 SS G_CDS: -5.03 Total: -4.82 kcal Atomic # 16 Polarization: -0.09 SS G_CDS: -2.40 Total: -2.50 kcal Total LS contribution 5.16 Total: 5.16 kcal Total: -7.13 -10.31 -17.44 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535148_12496548.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.987 kcal (2) G-P(sol) polarization free energy of solvation -7.125 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.112 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.313 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.438 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.425 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds