Wall clock time and date at job start Tue Mar 9 2021 13:07:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81403 * 1 3 3 C 1.81409 * 102.99875 * 2 1 4 4 C 1.53000 * 109.46805 * 179.97438 * 3 2 1 5 5 H 1.08998 * 112.85038 * 43.80803 * 4 3 2 6 6 C 1.53787 * 113.60890 * 174.99992 * 4 3 2 7 7 C 1.53784 * 87.07923 * 139.98364 * 6 4 3 8 8 H 1.09004 * 113.61162 * 220.01809 * 7 6 4 9 9 N 1.46499 * 113.61434 * 89.11404 * 7 6 4 10 10 C 1.34778 * 119.99940 * 155.00095 * 9 7 6 11 11 O 1.21624 * 120.00077 * 359.97438 * 10 9 7 12 12 C 1.47261 * 119.99999 * 179.97438 * 10 9 7 13 13 C 1.36768 * 126.94354 * 359.68511 * 12 10 9 14 14 N 1.34658 * 108.39618 * 179.86618 * 13 12 10 15 15 C 1.46502 * 124.84953 * 180.13300 * 14 13 12 16 16 C 1.36448 * 110.29896 * 0.41215 * 14 13 12 17 17 C 1.50697 * 125.57038 * 179.76483 * 16 14 13 18 18 O 1.42903 * 109.47177 * 30.00382 * 17 16 14 19 19 Si 1.86298 * 109.47054 * 149.99870 * 17 16 14 20 20 C 1.34484 * 108.85482 * 359.74540 * 16 14 13 21 21 C 1.53779 * 87.08045 * 334.56667 * 7 6 4 22 22 H 1.08997 * 109.47050 * 59.99849 * 1 2 3 23 23 H 1.09000 * 109.47057 * 180.02562 * 1 2 3 24 24 H 1.09007 * 109.46886 * 300.00105 * 1 2 3 25 25 H 1.09003 * 109.46795 * 59.99862 * 3 2 1 26 26 H 1.08993 * 109.47307 * 299.99955 * 3 2 1 27 27 H 1.09004 * 113.61202 * 254.53117 * 6 4 3 28 28 H 1.08994 * 113.61447 * 25.43549 * 6 4 3 29 29 H 0.97000 * 120.00274 * 334.99936 * 9 7 6 30 30 H 1.07997 * 125.79978 * 359.97438 * 13 12 10 31 31 H 1.08999 * 109.47637 * 270.31704 * 15 14 13 32 32 H 1.09003 * 109.46928 * 30.31604 * 15 14 13 33 33 H 1.09000 * 109.46941 * 150.31499 * 15 14 13 34 34 H 1.08996 * 109.47667 * 269.99979 * 17 16 14 35 35 H 0.96698 * 114.00233 * 59.99247 * 18 17 16 36 36 H 1.48504 * 109.99878 * 58.68198 * 19 17 16 37 37 H 1.48501 * 110.00154 * 180.02562 * 19 17 16 38 38 H 1.07998 * 126.83216 * 180.02562 * 20 16 14 39 39 H 1.09006 * 113.61307 * 270.88660 * 21 7 6 40 40 H 1.08999 * 113.69146 * 139.99146 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2221 1.7676 0.0000 4 6 3.7423 1.9400 0.0006 5 1 4.2449 1.2674 -0.6944 6 6 4.1962 3.4042 -0.1221 7 6 5.2867 3.0704 0.9095 8 1 5.4505 3.8601 1.6428 9 7 6.5311 2.5813 0.3107 10 6 7.6977 2.7229 0.9706 11 8 7.7175 3.2571 2.0630 12 6 8.9484 2.2307 0.3688 13 6 9.0892 1.6072 -0.8402 14 7 10.3923 1.3199 -1.0210 15 6 10.9463 0.6514 -2.2011 16 6 11.1222 1.7348 0.0546 17 6 12.6126 1.5801 0.2150 18 8 13.2355 1.6081 -1.0709 19 14 13.2734 2.9770 1.2555 20 6 10.2941 2.3046 0.9480 21 6 4.3608 1.9486 1.4086 22 1 -0.3633 0.5138 -0.8899 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3633 0.5139 0.8900 25 1 1.8031 2.2372 0.8900 26 1 1.8032 2.2372 -0.8899 27 1 4.5894 3.6584 -1.1065 28 1 3.4590 4.1215 0.2384 29 1 6.5154 2.1555 -0.5608 30 1 8.2912 1.3848 -1.5331 31 1 10.9400 -0.4272 -2.0442 32 1 10.3411 0.8950 -3.0743 33 1 11.9700 0.9891 -2.3628 34 1 12.8289 0.6298 0.7029 35 1 13.0848 2.4266 -1.5632 36 1 12.6103 2.9783 2.5842 37 1 14.7425 2.8364 1.4206 38 1 10.5659 2.7320 1.9019 39 1 3.6685 2.2681 2.1876 40 1 4.8856 1.0271 1.6605 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535148_13287730.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:07:40 Heat of formation + Delta-G solvation = 11.123910 kcal Electronic energy + Delta-G solvation = -21473.100692 eV Core-core repulsion = 18189.579346 eV Total energy + Delta-G solvation = -3283.521345 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.119 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -42.47958 -40.98969 -39.03641 -37.89693 -34.50066 -33.76251 -31.59199 -30.47464 -29.69981 -27.64958 -26.74799 -26.35465 -24.37411 -23.22823 -21.04245 -20.76099 -20.14516 -19.04368 -17.45180 -17.39877 -16.92159 -16.80931 -16.74823 -15.98270 -15.88476 -15.73842 -15.45821 -15.14085 -15.08378 -14.92622 -14.62008 -14.33229 -14.05581 -13.97961 -13.63696 -13.47868 -13.40690 -13.34544 -13.10954 -12.78387 -12.22130 -12.10685 -11.95640 -11.52554 -11.22814 -10.90955 -10.78132 -10.74945 -9.95343 -9.55085 -9.21294 -8.64649 -5.01184 0.68934 0.77572 1.04845 1.39661 1.61973 1.64937 1.86019 2.03964 2.28448 2.69414 3.12132 3.41355 3.50769 3.52114 3.68568 3.77774 3.78610 3.84722 4.16262 4.17134 4.17716 4.22806 4.24035 4.34257 4.35153 4.45210 4.47887 4.58650 4.67498 4.70567 4.74513 4.81558 4.95771 4.99737 5.04274 5.07119 5.19048 5.63710 5.73239 5.96677 6.14806 6.29075 6.67982 7.48986 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.266 6.266 3 C -0.075 4.075 4 C -0.096 4.096 5 H 0.097 0.903 6 C -0.135 4.135 7 C 0.123 3.877 8 H 0.106 0.894 9 N -0.714 5.714 10 C 0.594 3.406 11 O -0.540 6.540 12 C -0.227 4.227 13 C 0.051 3.949 14 N -0.423 5.423 15 C 0.049 3.951 16 C -0.020 4.020 17 C -0.043 4.043 18 O -0.542 6.542 19 Si 0.716 3.284 20 C -0.136 4.136 21 C -0.143 4.143 22 H 0.076 0.924 23 H 0.101 0.899 24 H 0.077 0.923 25 H 0.083 0.917 26 H 0.082 0.918 27 H 0.077 0.923 28 H 0.098 0.902 29 H 0.397 0.603 30 H 0.170 0.830 31 H 0.073 0.927 32 H 0.082 0.918 33 H 0.114 0.886 34 H 0.118 0.882 35 H 0.381 0.619 36 H -0.251 1.251 37 H -0.252 1.252 38 H 0.152 0.848 39 H 0.092 0.908 40 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.170 1.331 -6.264 6.510 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.040 6.040 3 C -0.223 4.223 4 C -0.115 4.115 5 H 0.116 0.884 6 C -0.175 4.175 7 C 0.017 3.983 8 H 0.124 0.876 9 N -0.365 5.365 10 C 0.383 3.617 11 O -0.417 6.417 12 C -0.237 4.237 13 C -0.085 4.085 14 N -0.098 5.098 15 C -0.092 4.092 16 C -0.129 4.129 17 C -0.153 4.153 18 O -0.348 6.348 19 Si 0.615 3.385 20 C -0.160 4.160 21 C -0.182 4.182 22 H 0.095 0.905 23 H 0.120 0.880 24 H 0.096 0.904 25 H 0.102 0.898 26 H 0.101 0.899 27 H 0.096 0.904 28 H 0.116 0.884 29 H 0.231 0.769 30 H 0.187 0.813 31 H 0.091 0.909 32 H 0.100 0.900 33 H 0.132 0.868 34 H 0.135 0.865 35 H 0.229 0.771 36 H -0.175 1.175 37 H -0.177 1.177 38 H 0.170 0.830 39 H 0.111 0.889 40 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 0.291 0.299 -4.828 4.846 hybrid contribution -1.493 -0.059 -0.657 1.632 sum -1.202 0.240 -5.485 5.620 Atomic orbital electron populations 1.23392 0.94071 1.06696 1.04937 1.87032 1.07488 1.11421 1.98050 1.23437 0.99436 0.94407 1.04997 1.22381 0.92447 0.97561 0.99102 0.88449 1.23401 0.97943 0.96102 1.00096 1.21754 0.82849 0.97342 0.96323 0.87560 1.45483 1.06194 1.62447 1.22420 1.17387 0.82210 0.77773 0.84313 1.90787 1.86729 1.43724 1.20485 1.20269 0.93738 1.12467 0.97237 1.21928 0.86209 1.01989 0.98392 1.43487 1.06049 1.44290 1.15952 1.22578 1.02847 0.98354 0.85397 1.20745 0.94496 1.07205 0.90498 1.24843 0.87272 1.11006 0.92169 1.86449 1.75349 1.43538 1.29458 0.94078 0.79253 0.84826 0.80303 1.21727 0.90482 1.03926 0.99844 1.23509 0.98580 0.99984 0.96152 0.90482 0.88011 0.90438 0.89816 0.89892 0.90423 0.88389 0.76864 0.81279 0.90854 0.89964 0.86762 0.86485 0.77109 1.17477 1.17675 0.83047 0.88905 0.90628 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.13 10.76 101.05 1.09 1.22 16 2 S -0.27 -0.27 22.37 -107.50 -2.40 -2.68 16 3 C -0.07 0.09 5.78 37.16 0.21 0.30 16 4 C -0.10 0.14 3.53 -89.81 -0.32 -0.17 16 5 H 0.10 -0.13 8.13 -51.93 -0.42 -0.55 16 6 C -0.14 0.30 7.39 -25.91 -0.19 0.11 16 7 C 0.12 0.01 4.32 -67.12 -0.29 -0.28 16 8 H 0.11 0.20 7.47 -51.93 -0.39 -0.19 16 9 N -0.71 -0.20 5.25 -54.14 -0.28 -0.48 16 10 C 0.59 2.22 7.81 -12.59 -0.10 2.12 16 11 O -0.54 -4.27 16.57 5.26 0.09 -4.18 16 12 C -0.23 -0.52 6.29 -103.35 -0.65 -1.17 16 13 C 0.05 -0.03 10.83 -16.84 -0.18 -0.21 16 14 N -0.42 0.30 3.09 -119.90 -0.37 -0.07 16 15 C 0.05 -0.16 10.71 59.85 0.64 0.48 16 16 C -0.02 -0.01 6.14 -81.87 -0.50 -0.51 16 17 C -0.04 0.04 2.98 36.00 0.11 0.14 16 18 O -0.54 1.03 9.95 -35.23 -0.35 0.68 16 19 Si 0.72 -0.78 31.29 -169.99 -5.32 -6.10 16 20 C -0.14 -0.34 9.49 -37.50 -0.36 -0.70 16 21 C -0.14 0.01 7.43 -25.92 -0.19 -0.18 16 22 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 23 H 0.10 -0.15 8.14 -51.92 -0.42 -0.57 16 24 H 0.08 -0.13 8.14 -51.92 -0.42 -0.55 16 25 H 0.08 -0.13 7.84 -51.92 -0.41 -0.53 16 26 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 27 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 28 H 0.10 -0.28 8.10 -51.93 -0.42 -0.70 16 29 H 0.40 -0.96 7.64 -40.82 -0.31 -1.28 16 30 H 0.17 -0.68 7.45 -52.49 -0.39 -1.07 16 31 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 32 H 0.08 -0.42 8.13 -51.93 -0.42 -0.84 16 33 H 0.11 -0.42 4.94 -51.93 -0.26 -0.68 16 34 H 0.12 -0.04 7.96 -51.93 -0.41 -0.46 16 35 H 0.38 -2.06 8.38 45.56 0.38 -1.68 16 36 H -0.25 -0.46 6.77 56.52 0.38 -0.08 16 37 H -0.25 -0.40 7.11 56.52 0.40 0.01 16 38 H 0.15 0.46 6.67 -52.49 -0.35 0.11 16 39 H 0.09 -0.04 7.90 -51.93 -0.41 -0.45 16 40 H 0.07 0.11 8.14 -51.93 -0.42 -0.31 16 LS Contribution 343.47 15.07 5.18 5.18 Total: 0.00 -8.55 343.47 -10.18 -18.73 By element: Atomic # 1 Polarization: -6.24 SS G_CDS: -5.99 Total: -12.23 kcal Atomic # 6 Polarization: 1.89 SS G_CDS: -0.73 Total: 1.15 kcal Atomic # 7 Polarization: 0.10 SS G_CDS: -0.65 Total: -0.55 kcal Atomic # 8 Polarization: -3.24 SS G_CDS: -0.26 Total: -3.50 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.32 Total: -6.10 kcal Atomic # 16 Polarization: -0.27 SS G_CDS: -2.40 Total: -2.68 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -8.55 -10.18 -18.73 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535148_13287730.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.856 kcal (2) G-P(sol) polarization free energy of solvation -8.550 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.307 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.183 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.732 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.124 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds