Wall clock time and date at job start Tue Mar 9 2021 13:08:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81391 * 1 3 3 C 1.81390 * 103.00264 * 2 1 4 4 C 1.52996 * 109.47410 * 179.97438 * 3 2 1 5 5 H 1.08998 * 112.84876 * 316.19666 * 4 3 2 6 6 C 1.53785 * 113.61588 * 87.50501 * 4 3 2 7 7 C 1.53778 * 87.08218 * 139.98169 * 6 4 3 8 8 H 1.09000 * 113.69163 * 220.00424 * 7 6 4 9 9 N 1.46505 * 113.61237 * 89.11484 * 7 6 4 10 10 C 1.34779 * 119.99899 * 107.50572 * 9 7 6 11 11 O 1.21601 * 119.99867 * 359.97438 * 10 9 7 12 12 C 1.47516 * 120.00293 * 179.97438 * 10 9 7 13 13 C 1.39775 * 120.07338 * 179.97438 * 12 10 9 14 14 C 1.37629 * 119.93266 * 179.97438 * 13 12 10 15 15 C 1.50697 * 119.96465 * 180.02562 * 14 13 12 16 16 O 1.42902 * 109.47290 * 104.97836 * 15 14 13 17 17 Si 1.86301 * 109.46984 * 344.97583 * 15 14 13 18 18 C 1.39191 * 120.06745 * 359.97438 * 14 13 12 19 19 N 1.39055 * 119.93184 * 180.02562 * 18 14 13 20 20 C 1.46901 * 110.99854 * 240.00353 * 19 18 14 21 21 C 1.46898 * 110.99970 * 116.04517 * 19 18 14 22 22 C 1.39239 * 120.14251 * 0.29713 * 18 14 13 23 23 C 1.37593 * 120.06312 * 359.44832 * 22 18 14 24 24 C 1.53777 * 87.08489 * 334.56710 * 7 6 4 25 25 H 1.09002 * 109.47302 * 299.99951 * 1 2 3 26 26 H 1.09004 * 109.47509 * 59.99787 * 1 2 3 27 27 H 1.08999 * 109.47466 * 179.97438 * 1 2 3 28 28 H 1.09004 * 109.47093 * 60.00042 * 3 2 1 29 29 H 1.09002 * 109.47610 * 299.99959 * 3 2 1 30 30 H 1.08991 * 113.61499 * 25.43183 * 6 4 3 31 31 H 1.09003 * 113.60756 * 254.52921 * 6 4 3 32 32 H 0.96996 * 120.00065 * 287.49817 * 9 7 6 33 33 H 1.08000 * 120.03157 * 359.95863 * 13 12 10 34 34 H 1.09000 * 109.47093 * 224.97872 * 15 14 13 35 35 H 0.96699 * 114.00359 * 59.99790 * 16 15 14 36 36 H 1.48504 * 109.99886 * 178.68340 * 17 15 14 37 37 H 1.48498 * 110.00276 * 300.00002 * 17 15 14 38 38 H 1.09002 * 109.47401 * 59.99571 * 20 19 18 39 39 H 1.09001 * 109.46874 * 299.99584 * 20 19 18 40 40 H 1.09004 * 109.46970 * 179.97438 * 20 19 18 41 41 H 1.09006 * 109.46770 * 179.97438 * 21 19 18 42 42 H 1.09001 * 109.47456 * 300.00115 * 21 19 18 43 43 H 1.09000 * 109.46814 * 60.00421 * 21 19 18 44 44 H 1.08002 * 119.96976 * 179.72444 * 22 18 14 45 45 H 1.08003 * 120.02921 * 180.27185 * 23 22 18 46 46 H 1.09002 * 113.61816 * 139.97825 * 24 7 6 47 47 H 1.08995 * 113.61622 * 270.88507 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8139 0.0000 0.0000 3 6 2.2220 1.7674 0.0000 4 6 3.7422 1.9398 0.0006 5 1 4.2442 1.2673 0.6962 6 6 4.3619 1.9482 -1.4068 7 6 5.2875 3.0700 -0.9071 8 1 5.4529 3.8601 -1.6396 9 7 6.5313 2.5809 -0.3071 10 6 7.6985 2.7224 -0.9660 11 8 7.7191 3.2556 -2.0587 12 6 8.9511 2.2304 -0.3617 13 6 10.1623 2.3759 -1.0440 14 6 11.3292 1.9164 -0.4772 15 6 12.6356 2.0734 -1.2119 16 8 13.3954 3.1252 -0.6132 17 14 12.2984 2.4890 -2.9964 18 6 11.3042 1.3078 0.7743 19 7 12.4850 0.8450 1.3445 20 6 12.4182 -0.6014 1.5928 21 6 12.7956 1.5774 2.5794 22 6 10.0985 1.1562 1.4541 23 6 8.9292 1.6182 0.8951 24 6 4.1962 3.4041 0.1235 25 1 -0.3634 0.5138 0.8900 26 1 -0.3634 0.5139 -0.8900 27 1 -0.3634 -1.0276 -0.0005 28 1 1.8031 2.2370 0.8900 29 1 1.8032 2.2371 -0.8900 30 1 3.6704 2.2675 -2.1864 31 1 4.8882 1.0271 -1.6575 32 1 6.5148 2.1553 0.5644 33 1 10.1823 2.8483 -2.0150 34 1 13.1982 1.1415 -1.1560 35 1 13.6081 2.9759 0.3182 36 1 13.5787 2.6777 -3.7247 37 1 11.5088 1.4028 -3.6305 38 1 12.2565 -1.1247 0.6504 39 1 11.5941 -0.8155 2.2733 40 1 13.3545 -0.9372 2.0385 41 1 13.7236 1.1951 3.0048 42 1 12.9084 2.6379 2.3543 43 1 11.9852 1.4421 3.2956 44 1 10.0817 0.6795 2.4231 45 1 7.9950 1.5043 1.4248 46 1 4.5886 3.6583 1.1082 47 1 3.4593 4.1214 -0.2377 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535148_13422196.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:03 Heat of formation + Delta-G solvation = -2.069651 kcal Electronic energy + Delta-G solvation = -26908.617571 eV Core-core repulsion = 23185.222731 eV Total energy + Delta-G solvation = -3723.394839 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.150 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -41.83392 -41.01207 -39.45497 -37.66172 -37.24561 -34.79673 -32.77784 -31.52625 -30.50962 -29.72703 -28.78640 -26.91744 -26.83484 -26.29067 -24.10538 -23.27181 -22.91835 -21.30670 -20.36743 -19.13606 -17.95771 -17.90573 -17.43444 -17.28445 -16.67597 -16.46256 -16.18630 -16.04572 -15.94333 -15.44138 -15.40853 -15.14272 -15.09880 -15.03563 -14.61936 -14.40514 -14.10138 -13.98690 -13.95113 -13.72306 -13.62947 -13.43976 -13.17530 -13.10563 -12.88183 -12.84633 -12.71458 -12.20364 -11.89918 -11.61057 -11.33205 -11.28532 -11.12665 -10.95443 -10.89742 -10.16154 -10.09911 -9.82995 -9.75669 -8.68321 -4.72936 -0.40450 0.13156 0.65064 1.50547 1.58100 1.68406 1.80385 1.99099 2.10739 2.59680 2.64668 3.31411 3.42513 3.48801 3.55873 3.61961 3.66919 3.74161 3.88175 3.97352 4.05637 4.12683 4.13541 4.14685 4.15629 4.18534 4.27472 4.33647 4.35367 4.40440 4.41288 4.57816 4.60107 4.62925 4.67147 4.71845 4.73503 4.74943 4.79362 4.93372 4.97212 4.99145 5.05485 5.11101 5.19248 5.46902 5.53836 5.57848 6.10231 6.40094 6.67807 7.15531 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.265 6.265 3 C -0.075 4.075 4 C -0.096 4.096 5 H 0.098 0.902 6 C -0.142 4.142 7 C 0.120 3.880 8 H 0.109 0.891 9 N -0.709 5.709 10 C 0.563 3.437 11 O -0.526 6.526 12 C -0.133 4.133 13 C -0.042 4.042 14 C -0.099 4.099 15 C -0.062 4.062 16 O -0.533 6.533 17 Si 0.730 3.270 18 C 0.125 3.875 19 N -0.518 5.518 20 C 0.025 3.975 21 C 0.023 3.977 22 C -0.153 4.153 23 C -0.071 4.071 24 C -0.135 4.135 25 H 0.076 0.924 26 H 0.077 0.923 27 H 0.101 0.899 28 H 0.083 0.917 29 H 0.084 0.916 30 H 0.095 0.905 31 H 0.076 0.924 32 H 0.400 0.600 33 H 0.147 0.853 34 H 0.081 0.919 35 H 0.364 0.636 36 H -0.252 1.252 37 H -0.250 1.250 38 H 0.072 0.928 39 H 0.036 0.964 40 H 0.078 0.922 41 H 0.079 0.921 42 H 0.075 0.925 43 H 0.036 0.964 44 H 0.130 0.870 45 H 0.128 0.872 46 H 0.078 0.922 47 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.071 -0.292 5.449 6.262 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.039 6.039 3 C -0.223 4.223 4 C -0.116 4.116 5 H 0.116 0.884 6 C -0.181 4.181 7 C 0.015 3.985 8 H 0.127 0.873 9 N -0.361 5.361 10 C 0.351 3.649 11 O -0.403 6.403 12 C -0.136 4.136 13 C -0.061 4.061 14 C -0.100 4.100 15 C -0.171 4.171 16 O -0.339 6.339 17 Si 0.629 3.371 18 C 0.030 3.970 19 N -0.239 5.239 20 C -0.121 4.121 21 C -0.123 4.123 22 C -0.173 4.173 23 C -0.091 4.091 24 C -0.175 4.175 25 H 0.095 0.905 26 H 0.096 0.904 27 H 0.120 0.880 28 H 0.101 0.899 29 H 0.102 0.898 30 H 0.113 0.887 31 H 0.094 0.906 32 H 0.236 0.764 33 H 0.164 0.836 34 H 0.098 0.902 35 H 0.212 0.788 36 H -0.177 1.177 37 H -0.175 1.175 38 H 0.091 0.909 39 H 0.054 0.946 40 H 0.097 0.903 41 H 0.098 0.902 42 H 0.093 0.907 43 H 0.054 0.946 44 H 0.147 0.853 45 H 0.146 0.854 46 H 0.096 0.904 47 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -1.944 -0.706 2.913 3.573 hybrid contribution -1.172 -0.636 2.542 2.870 sum -3.116 -1.342 5.455 6.424 Atomic orbital electron populations 1.23394 0.94003 1.06732 1.04962 1.87026 1.07565 1.11297 1.98051 1.23428 0.99314 0.94524 1.05060 1.22393 0.92615 0.97523 0.99040 0.88428 1.23507 0.98499 0.99821 0.96288 1.21834 0.82660 0.97548 0.96498 0.87276 1.45564 1.06285 1.61764 1.22504 1.18133 0.83242 0.78638 0.84907 1.90822 1.86689 1.42797 1.20000 1.19867 0.93659 1.03978 0.96095 1.21037 0.90311 0.95452 0.99306 1.20250 0.96071 0.99065 0.94627 1.25285 0.89326 0.94216 1.08306 1.86737 1.73760 1.43899 1.29471 0.92904 0.83303 0.89226 0.71684 1.18842 0.88911 0.95769 0.93451 1.59467 1.31104 1.05339 1.27961 1.22504 1.01914 0.85896 1.01809 1.22552 1.01379 0.99213 0.89179 1.21580 0.92852 1.02037 1.00875 1.21148 0.98347 0.95744 0.93834 1.23405 0.97838 0.96222 1.00058 0.90464 0.90415 0.87983 0.89854 0.89761 0.88687 0.90554 0.76425 0.83609 0.90159 0.78771 1.17705 1.17476 0.90940 0.94588 0.90287 0.90191 0.90668 0.94563 0.85257 0.85390 0.90358 0.88196 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.17 10.76 101.05 1.09 1.26 16 2 S -0.27 -0.16 22.37 -107.50 -2.40 -2.56 16 3 C -0.08 0.13 5.78 37.16 0.21 0.34 16 4 C -0.10 0.21 3.53 -89.80 -0.32 -0.11 16 5 H 0.10 -0.19 8.13 -51.93 -0.42 -0.61 16 6 C -0.14 0.15 7.43 -25.92 -0.19 -0.05 16 7 C 0.12 -0.11 4.32 -67.12 -0.29 -0.40 16 8 H 0.11 0.06 7.46 -51.93 -0.39 -0.32 16 9 N -0.71 0.55 5.21 -54.06 -0.28 0.26 16 10 C 0.56 1.20 7.76 -12.48 -0.10 1.10 16 11 O -0.53 -2.94 15.94 5.28 0.08 -2.86 16 12 C -0.13 -0.15 5.88 -104.95 -0.62 -0.76 16 13 C -0.04 -0.08 8.19 -39.23 -0.32 -0.40 16 14 C -0.10 -0.14 5.28 -104.49 -0.55 -0.69 16 15 C -0.06 -0.11 2.29 36.00 0.08 -0.03 16 16 O -0.53 -1.21 12.65 -35.23 -0.45 -1.66 16 17 Si 0.73 1.34 30.17 -169.99 -5.13 -3.78 16 18 C 0.12 0.03 4.66 -83.86 -0.39 -0.36 16 19 N -0.52 0.41 3.70 -186.86 -0.69 -0.28 16 20 C 0.03 -0.04 9.33 60.07 0.56 0.52 16 21 C 0.02 -0.05 9.09 60.06 0.55 0.49 16 22 C -0.15 0.14 8.53 -39.44 -0.34 -0.20 16 23 C -0.07 0.08 9.53 -39.23 -0.37 -0.30 16 24 C -0.14 0.40 7.39 -25.92 -0.19 0.21 16 25 H 0.08 -0.16 8.14 -51.92 -0.42 -0.58 16 26 H 0.08 -0.15 8.14 -51.92 -0.42 -0.58 16 27 H 0.10 -0.18 8.14 -51.92 -0.42 -0.60 16 28 H 0.08 -0.19 8.14 -51.92 -0.42 -0.61 16 29 H 0.08 -0.18 7.85 -51.92 -0.41 -0.58 16 30 H 0.09 -0.13 7.90 -51.93 -0.41 -0.54 16 31 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 32 H 0.40 -1.26 6.72 -40.82 -0.27 -1.54 16 33 H 0.15 0.26 4.70 -52.49 -0.25 0.01 16 34 H 0.08 0.14 7.78 -51.93 -0.40 -0.26 16 35 H 0.36 0.08 7.47 45.56 0.34 0.42 16 36 H -0.25 -1.07 7.11 56.52 0.40 -0.67 16 37 H -0.25 -0.86 7.11 56.52 0.40 -0.45 16 38 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 39 H 0.04 -0.08 7.08 -51.93 -0.37 -0.45 16 40 H 0.08 -0.20 8.12 -51.93 -0.42 -0.62 16 41 H 0.08 -0.25 8.12 -51.93 -0.42 -0.67 16 42 H 0.07 -0.18 7.41 -51.93 -0.38 -0.56 16 43 H 0.04 -0.09 7.33 -51.93 -0.38 -0.47 16 44 H 0.13 -0.31 6.99 -52.49 -0.37 -0.68 16 45 H 0.13 -0.49 6.39 -52.48 -0.34 -0.83 16 46 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 47 H 0.10 -0.36 8.10 -51.93 -0.42 -0.78 16 LS Contribution 388.54 15.07 5.86 5.86 Total: 0.00 -6.28 388.54 -11.67 -17.95 By element: Atomic # 1 Polarization: -6.09 SS G_CDS: -7.47 Total: -13.55 kcal Atomic # 6 Polarization: 1.82 SS G_CDS: -1.19 Total: 0.63 kcal Atomic # 7 Polarization: 0.96 SS G_CDS: -0.97 Total: -0.02 kcal Atomic # 8 Polarization: -4.15 SS G_CDS: -0.36 Total: -4.51 kcal Atomic # 14 Polarization: 1.34 SS G_CDS: -5.13 Total: -3.78 kcal Atomic # 16 Polarization: -0.16 SS G_CDS: -2.40 Total: -2.56 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -6.28 -11.67 -17.95 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535148_13422196.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.878 kcal (2) G-P(sol) polarization free energy of solvation -6.281 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.598 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.668 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.948 kcal (6) G-S(sol) free energy of system = (1) + (5) -2.070 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds