Wall clock time and date at job start Tue Mar 9 2021 13:08:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.35987 * 117.00427 * 2 1 4 4 C 1.38559 * 120.06465 * 0.23097 * 3 2 1 5 5 C 1.38276 * 120.01795 * 180.29654 * 4 3 2 6 6 C 1.50703 * 119.92271 * 179.72400 * 5 4 3 7 7 O 1.42896 * 109.47055 * 299.72750 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 179.72642 * 6 5 4 9 9 C 1.38208 * 120.15614 * 359.45053 * 5 4 3 10 10 C 1.38378 * 120.13130 * 0.29552 * 9 5 4 11 11 Cl 1.73598 * 120.01258 * 179.97438 * 10 9 5 12 12 C 1.38624 * 119.97851 * 359.97438 * 10 9 5 13 13 O 1.36017 * 120.08007 * 179.97438 * 12 10 9 14 14 C 1.42904 * 117.00157 * 89.99417 * 13 12 10 15 15 C 1.52999 * 109.47380 * 270.00411 * 14 13 12 16 16 C 1.50702 * 109.47084 * 150.00095 * 14 13 12 17 17 O 1.21287 * 119.99997 * 5.00707 * 16 14 13 18 18 N 1.34771 * 120.00080 * 185.00050 * 16 14 13 19 19 C 1.46503 * 120.00210 * 180.02562 * 18 16 14 20 20 H 1.09003 * 112.84817 * 23.80996 * 19 18 16 21 21 C 1.53778 * 113.61347 * 155.00012 * 19 18 16 22 22 C 1.53786 * 87.08034 * 89.11923 * 21 19 18 23 23 H 1.08994 * 113.61460 * 270.80006 * 22 21 19 24 24 C 1.53001 * 113.61410 * 139.97763 * 22 21 19 25 25 S 1.81405 * 109.46704 * 175.00009 * 24 22 21 26 26 C 1.81405 * 102.99634 * 180.02562 * 25 24 22 27 27 C 1.53774 * 113.61536 * 252.50040 * 19 18 16 28 28 H 1.08994 * 109.47484 * 180.02562 * 1 2 3 29 29 H 1.09005 * 109.47185 * 300.00213 * 1 2 3 30 30 H 1.08997 * 109.47050 * 59.99720 * 1 2 3 31 31 H 1.08003 * 119.99236 * 0.02562 * 4 3 2 32 32 H 1.09002 * 109.47152 * 59.72558 * 6 5 4 33 33 H 0.96708 * 114.00101 * 299.99358 * 7 6 5 34 34 H 1.48501 * 109.99652 * 179.97438 * 8 6 5 35 35 H 1.48494 * 110.00064 * 301.31786 * 8 6 5 36 36 H 1.07994 * 119.93878 * 180.27121 * 9 5 4 37 37 H 1.08999 * 109.46622 * 30.01072 * 14 13 12 38 38 H 1.09003 * 109.46660 * 179.97438 * 15 14 13 39 39 H 1.08999 * 109.47065 * 299.99747 * 15 14 13 40 40 H 1.08995 * 109.46701 * 59.99669 * 15 14 13 41 41 H 0.97000 * 120.00006 * 0.02562 * 18 16 14 42 42 H 1.09006 * 113.61534 * 203.66668 * 21 19 18 43 43 H 1.08997 * 113.61583 * 334.48800 * 21 19 18 44 44 H 1.08992 * 109.47281 * 294.99818 * 24 22 21 45 45 H 1.09001 * 109.46888 * 55.00208 * 24 22 21 46 46 H 1.08998 * 109.46979 * 60.00216 * 26 25 24 47 47 H 1.09003 * 109.47138 * 180.02562 * 26 25 24 48 48 H 1.09004 * 109.47028 * 299.99856 * 26 25 24 49 49 H 1.08999 * 113.61554 * 25.43335 * 27 19 18 50 50 H 1.08996 * 113.61670 * 156.33581 * 27 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2933 2.3746 0.0048 5 6 1.9221 3.6061 -0.0014 6 6 1.1007 4.8696 -0.0024 7 8 0.2767 4.9011 -1.1694 8 14 2.2349 6.3475 -0.0028 9 6 3.3022 3.6810 -0.0009 10 6 4.0606 2.5236 -0.0005 11 17 5.7939 2.6213 -0.0006 12 6 3.4360 1.2861 0.0001 13 8 4.1795 0.1471 0.0001 14 6 4.5348 -0.3958 1.2733 15 6 5.8695 0.1990 1.7269 16 6 4.6639 -1.8932 1.1626 17 8 4.5603 -2.4325 0.0812 18 7 4.8945 -2.6331 2.2652 19 6 5.0205 -4.0887 2.1575 20 1 5.3205 -4.4150 1.1617 21 6 5.8491 -4.7206 3.2884 22 6 4.5350 -4.8394 4.0783 23 1 4.3092 -3.9623 4.6847 24 6 4.4045 -6.1499 4.8572 25 16 2.8926 -6.1098 5.8589 26 6 2.9138 -7.7199 6.6942 27 6 3.8123 -4.8550 2.7210 28 1 -0.3634 -1.0276 0.0005 29 1 -0.3634 0.5139 0.8900 30 1 -0.3633 0.5139 -0.8899 31 1 0.2147 2.3192 0.0090 32 1 0.4715 4.8946 0.8874 33 1 0.7709 4.8814 -2.0005 34 1 1.4370 7.6000 -0.0044 35 1 3.1191 6.3096 1.1896 36 1 3.7896 4.6446 -0.0014 37 1 3.7615 -0.1507 2.0013 38 1 6.1402 -0.2149 2.6983 39 1 6.6427 -0.0462 0.9988 40 1 5.7761 1.2820 1.8069 41 1 4.9771 -2.2018 3.1301 42 1 6.2878 -5.6826 3.0233 43 1 6.5693 -4.0363 3.7369 44 1 4.3551 -6.9847 4.1582 45 1 5.2693 -6.2726 5.5093 46 1 3.8159 -7.8029 7.3004 47 1 2.0360 -7.8088 7.3343 48 1 2.9019 -8.5158 5.9494 49 1 2.8871 -4.2788 2.7123 50 1 3.6940 -5.8537 2.3008 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16535148_13428712.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:06 Heat of formation + Delta-G solvation = -81.487549 kcal Electronic energy + Delta-G solvation = -33863.298133 eV Core-core repulsion = 29204.721209 eV Total energy + Delta-G solvation = -4658.576924 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.115 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -42.03591 -41.37495 -39.97039 -39.27025 -38.82007 -37.77435 -36.91473 -34.94698 -33.09460 -31.53940 -31.37675 -30.44350 -29.61140 -28.60616 -26.83535 -26.72387 -25.64685 -23.79540 -23.70530 -22.81940 -21.87687 -20.34891 -19.64691 -18.80868 -18.68018 -18.31187 -17.54773 -17.48064 -17.11090 -16.89265 -16.48294 -16.36333 -16.27385 -15.94328 -15.85638 -15.73340 -15.65051 -15.35356 -15.00854 -14.86653 -14.47951 -14.41522 -14.30744 -14.16164 -13.91678 -13.83513 -13.68086 -13.56322 -13.34097 -13.27890 -12.86188 -12.81566 -12.70934 -12.67526 -12.32110 -12.10521 -12.06624 -11.88317 -11.71190 -11.52864 -11.37707 -11.25162 -10.89852 -10.79380 -10.53042 -10.16214 -9.85525 -9.45520 -8.70482 -4.99426 -0.36518 -0.05027 0.73482 0.82307 1.25391 1.42459 1.58346 1.62815 1.67368 1.94601 2.14709 2.18303 2.65439 3.32174 3.42010 3.51855 3.54309 3.54768 3.70319 3.71574 3.76316 3.80204 3.81728 3.95080 3.98127 4.04561 4.24049 4.26817 4.27582 4.29500 4.32716 4.41524 4.42539 4.51510 4.55489 4.63737 4.64766 4.66953 4.73003 4.76141 4.81523 4.82743 4.86019 5.00168 5.04238 5.06420 5.09991 5.15318 5.20817 5.53704 5.87850 6.27989 6.43862 6.71142 7.10252 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.323 6.323 3 C 0.118 3.882 4 C -0.165 4.165 5 C -0.063 4.063 6 C -0.068 4.068 7 O -0.550 6.550 8 Si 0.762 3.238 9 C -0.132 4.132 10 C -0.016 4.016 11 Cl -0.036 7.036 12 C 0.052 3.948 13 O -0.308 6.308 14 C 0.076 3.924 15 C -0.175 4.175 16 C 0.521 3.479 17 O -0.563 6.563 18 N -0.695 5.695 19 C 0.113 3.887 20 H 0.085 0.915 21 C -0.117 4.117 22 C -0.087 4.087 23 H 0.099 0.901 24 C -0.062 4.062 25 S -0.324 6.324 26 C -0.112 4.112 27 C -0.143 4.143 28 H 0.112 0.888 29 H 0.073 0.927 30 H 0.070 0.930 31 H 0.157 0.843 32 H 0.122 0.878 33 H 0.397 0.603 34 H -0.293 1.293 35 H -0.277 1.277 36 H 0.161 0.839 37 H 0.101 0.899 38 H 0.101 0.899 39 H 0.062 0.938 40 H 0.083 0.917 41 H 0.416 0.584 42 H 0.110 0.890 43 H 0.093 0.907 44 H 0.089 0.911 45 H 0.095 0.905 46 H 0.086 0.914 47 H 0.103 0.897 48 H 0.083 0.917 49 H 0.058 0.942 50 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.177 0.622 4.574 4.764 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.237 6.237 3 C 0.071 3.929 4 C -0.183 4.183 5 C -0.063 4.063 6 C -0.178 4.178 7 O -0.358 6.358 8 Si 0.667 3.333 9 C -0.151 4.151 10 C -0.044 4.044 11 Cl -0.007 7.007 12 C 0.007 3.993 13 O -0.224 6.224 14 C 0.018 3.982 15 C -0.232 4.232 16 C 0.307 3.693 17 O -0.440 6.440 18 N -0.348 5.348 19 C 0.007 3.993 20 H 0.103 0.897 21 C -0.157 4.157 22 C -0.106 4.106 23 H 0.117 0.883 24 C -0.210 4.210 25 S -0.098 6.098 26 C -0.280 4.280 27 C -0.181 4.181 28 H 0.130 0.870 29 H 0.091 0.909 30 H 0.088 0.912 31 H 0.175 0.825 32 H 0.139 0.861 33 H 0.248 0.752 34 H -0.220 1.220 35 H -0.204 1.204 36 H 0.178 0.822 37 H 0.119 0.881 38 H 0.119 0.881 39 H 0.081 0.919 40 H 0.102 0.898 41 H 0.253 0.747 42 H 0.129 0.871 43 H 0.111 0.889 44 H 0.107 0.893 45 H 0.114 0.886 46 H 0.105 0.895 47 H 0.122 0.878 48 H 0.102 0.898 49 H 0.076 0.924 50 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 0.423 1.439 4.608 4.846 hybrid contribution 0.186 -1.259 0.633 1.421 sum 0.610 0.180 5.241 5.279 Atomic orbital electron populations 1.23424 0.75962 1.05619 1.02813 1.86214 1.23649 1.25876 1.87914 1.19390 0.90931 0.85961 0.96638 1.21289 1.01570 0.90174 1.05310 1.20235 0.92843 0.95879 0.97389 1.25161 0.99771 1.00886 0.91978 1.86488 1.36286 1.96752 1.16242 0.93663 0.78673 0.73675 0.87308 1.20929 0.92833 0.97379 1.03929 1.20977 0.86269 0.93130 1.03976 1.98391 1.07789 1.98304 1.96185 1.17837 0.87024 0.85699 1.08758 1.86244 1.69864 1.38244 1.28079 1.22297 1.00061 0.90072 0.85817 1.22569 0.94415 1.03303 1.02928 1.20558 0.75508 0.89049 0.84203 1.90730 1.50117 1.74053 1.29131 1.45432 1.72704 1.06767 1.09925 1.21867 0.97892 0.79229 1.00291 0.89703 1.23340 0.95799 1.02573 0.93971 1.22320 0.97289 0.96655 0.94375 0.88313 1.23428 0.96044 1.01377 1.00131 1.87211 1.36842 1.27599 1.58181 1.23401 1.06808 0.94849 1.02970 1.23488 0.97433 1.01198 0.96030 0.86971 0.90893 0.91172 0.82507 0.86069 0.75239 1.22016 1.20361 0.82181 0.88113 0.88077 0.91856 0.89832 0.74668 0.87122 0.88880 0.89260 0.88626 0.89522 0.87822 0.89776 0.92363 0.88625 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 113.37 1.11 1.09 16 2 O -0.32 -2.30 10.28 -79.54 -0.82 -3.12 16 3 C 0.12 0.64 6.70 22.56 0.15 0.79 16 4 C -0.16 -0.09 8.60 22.36 0.19 0.11 16 5 C -0.06 0.10 5.39 -19.86 -0.11 -0.01 16 6 C -0.07 0.24 2.82 71.24 0.20 0.44 16 7 O -0.55 1.56 12.77 -148.98 -1.90 -0.34 16 8 Si 0.76 -3.21 29.78 68.60 2.04 -1.17 16 9 C -0.13 0.12 8.45 22.30 0.19 0.31 16 10 C -0.02 -0.05 6.24 22.40 0.14 0.09 16 11 Cl -0.04 -0.10 24.89 -2.72 -0.07 -0.16 16 12 C 0.05 0.37 5.56 22.58 0.13 0.49 16 13 O -0.31 -3.33 8.55 -67.35 -0.58 -3.91 16 14 C 0.08 0.34 3.19 29.85 0.10 0.44 16 15 C -0.17 0.10 8.35 71.98 0.60 0.71 16 16 C 0.52 4.09 7.18 87.66 0.63 4.72 16 17 O -0.56 -10.35 16.11 15.94 0.26 -10.09 16 18 N -0.69 0.00 5.22 -440.04 -2.30 -2.30 16 19 C 0.11 0.00 4.32 45.51 0.20 0.20 16 20 H 0.08 0.43 7.46 -2.39 -0.02 0.41 16 21 C -0.12 0.72 7.39 31.12 0.23 0.95 16 22 C -0.09 0.37 3.53 -10.27 -0.04 0.33 16 23 H 0.10 -0.38 8.13 -2.39 -0.02 -0.40 16 24 C -0.06 0.23 5.78 71.98 0.42 0.65 16 25 S -0.32 -0.51 22.37 -56.49 -1.26 -1.78 16 26 C -0.11 0.34 10.76 113.37 1.22 1.56 16 27 C -0.14 0.05 7.43 31.12 0.23 0.28 16 28 H 0.11 -0.35 8.14 -2.39 -0.02 -0.37 16 29 H 0.07 -0.34 7.65 -2.38 -0.02 -0.36 16 30 H 0.07 -0.23 7.67 -2.39 -0.02 -0.25 16 31 H 0.16 -0.38 6.30 -2.91 -0.02 -0.40 16 32 H 0.12 -0.47 7.96 -2.39 -0.02 -0.48 16 33 H 0.40 -4.02 8.70 -74.05 -0.64 -4.67 16 34 H -0.29 -0.91 7.11 99.48 0.71 -0.20 16 35 H -0.28 0.02 7.11 99.48 0.71 0.72 16 36 H 0.16 -0.79 4.86 -2.91 -0.01 -0.80 16 37 H 0.10 0.10 7.91 -2.39 -0.02 0.08 16 38 H 0.10 -0.68 7.93 -2.39 -0.02 -0.70 16 39 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 40 H 0.08 -0.06 5.45 -2.39 -0.01 -0.08 16 41 H 0.42 -2.66 8.48 -92.71 -0.79 -3.44 16 42 H 0.11 -0.87 8.10 -2.38 -0.02 -0.89 16 43 H 0.09 -0.77 8.14 -2.39 -0.02 -0.79 16 44 H 0.09 -0.41 7.84 -2.39 -0.02 -0.43 16 45 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 46 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 47 H 0.10 -0.37 8.14 -2.39 -0.02 -0.39 16 48 H 0.08 -0.37 8.14 -2.39 -0.02 -0.39 16 49 H 0.06 0.19 8.14 -2.39 -0.02 0.18 16 50 H 0.10 -0.07 7.90 -2.39 -0.02 -0.09 16 Total: 0.00 -24.89 433.17 0.55 -24.34 By element: Atomic # 1 Polarization: -14.20 SS G_CDS: -0.41 Total: -14.61 kcal Atomic # 6 Polarization: 7.55 SS G_CDS: 5.59 Total: 13.13 kcal Atomic # 7 Polarization: 0.00 SS G_CDS: -2.30 Total: -2.30 kcal Atomic # 8 Polarization: -14.42 SS G_CDS: -3.04 Total: -17.46 kcal Atomic # 14 Polarization: -3.21 SS G_CDS: 2.04 Total: -1.17 kcal Atomic # 16 Polarization: -0.51 SS G_CDS: -1.26 Total: -1.78 kcal Atomic # 17 Polarization: -0.10 SS G_CDS: -0.07 Total: -0.16 kcal Total: -24.89 0.55 -24.34 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535148_13428712.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.150 kcal (2) G-P(sol) polarization free energy of solvation -24.891 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.042 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.554 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.337 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.488 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds