Wall clock time and date at job start Tue Mar 9 2021 13:09:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81406 * 1 3 3 C 1.81403 * 102.99631 * 2 1 4 4 C 1.53001 * 109.47146 * 180.02562 * 3 2 1 5 5 H 1.09003 * 112.84750 * 43.80292 * 4 3 2 6 6 C 1.53780 * 113.61578 * 174.99875 * 4 3 2 7 7 C 1.53781 * 87.08248 * 139.98032 * 6 4 3 8 8 H 1.08998 * 113.61640 * 219.93595 * 7 6 4 9 9 N 1.46497 * 113.61409 * 89.11321 * 7 6 4 10 10 C 1.34780 * 119.99786 * 155.00150 * 9 7 6 11 11 O 1.21692 * 119.99801 * 5.10700 * 10 9 7 12 12 C 1.46672 * 119.99630 * 184.83316 * 10 9 7 13 13 C 1.37885 * 126.22700 * 354.91620 * 12 10 9 14 14 C 1.39878 * 107.08918 * 179.88720 * 13 12 10 15 15 Br 1.89104 * 126.07134 * 180.14922 * 14 13 12 16 16 C 1.35509 * 107.85638 * 0.38456 * 14 13 12 17 17 C 1.50696 * 125.57382 * 179.80108 * 16 14 13 18 18 O 1.42900 * 109.47516 * 149.95452 * 17 16 14 19 19 Si 1.86303 * 109.47301 * 29.95477 * 17 16 14 20 20 N 1.35596 * 108.85454 * 359.76159 * 16 14 13 21 21 C 1.46502 * 125.67858 * 180.02562 * 20 16 14 22 22 C 1.53782 * 113.61212 * 272.49831 * 4 3 2 23 23 H 1.08999 * 109.46988 * 299.99777 * 1 2 3 24 24 H 1.08997 * 109.47171 * 60.00635 * 1 2 3 25 25 H 1.09002 * 109.46736 * 179.97438 * 1 2 3 26 26 H 1.08997 * 109.47297 * 59.99687 * 3 2 1 27 27 H 1.09003 * 109.46928 * 300.00176 * 3 2 1 28 28 H 1.09002 * 113.61360 * 25.43104 * 6 4 3 29 29 H 1.08996 * 113.68936 * 254.53823 * 6 4 3 30 30 H 0.97001 * 120.00538 * 335.00459 * 9 7 6 31 31 H 1.07994 * 126.45632 * 0.02562 * 13 12 10 32 32 H 1.09004 * 109.47178 * 269.95698 * 17 16 14 33 33 H 0.96694 * 114.00202 * 300.00766 * 18 17 16 34 34 H 1.48506 * 109.99712 * 58.68105 * 19 17 16 35 35 H 1.48498 * 110.00284 * 180.02562 * 19 17 16 36 36 H 1.09005 * 109.46669 * 275.77717 * 21 20 16 37 37 H 1.09001 * 109.46548 * 35.77040 * 21 20 16 38 38 H 1.08993 * 109.47775 * 155.77507 * 21 20 16 39 39 H 1.08997 * 113.61412 * 105.47338 * 22 4 3 40 40 H 1.08997 * 113.61262 * 334.56497 * 22 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8141 0.0000 0.0000 3 6 2.2220 1.7676 0.0000 4 6 3.7423 1.9401 -0.0006 5 1 4.2442 1.2676 -0.6962 6 6 4.1960 3.4043 -0.1235 7 6 5.2874 3.0704 0.9071 8 1 5.4527 3.8605 1.6396 9 7 6.5312 2.5814 0.3072 10 6 7.6984 2.7229 0.9662 11 8 7.7079 3.1716 2.0973 12 6 8.9564 2.3305 0.3222 13 6 9.0864 1.7160 -0.9053 14 6 10.4544 1.5282 -1.1281 15 35 11.2348 0.7327 -2.6560 16 6 11.1210 2.0128 -0.0524 17 6 12.6173 2.0084 0.1267 18 8 13.0046 3.1274 0.9267 19 14 13.4427 2.1211 -1.5397 20 7 10.2216 2.5031 0.8360 21 6 10.5430 3.1153 2.1276 22 6 4.3618 1.9484 1.4068 23 1 -0.3633 0.5138 0.8900 24 1 -0.3633 0.5137 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 1.8030 2.2372 0.8899 27 1 1.8030 2.2371 -0.8900 28 1 3.4591 4.1216 0.2377 29 1 4.5885 3.6600 -1.1077 30 1 6.5149 2.1558 -0.5643 31 1 8.2834 1.4348 -1.5704 32 1 12.9213 1.0857 0.6211 33 1 12.7651 3.9839 0.5472 34 1 13.0115 3.3593 -2.2372 35 1 14.9187 2.1171 -1.3767 36 1 10.6669 2.3351 2.8787 37 1 11.4682 3.6849 2.0394 38 1 9.7333 3.7813 2.4256 39 1 4.8882 1.0275 1.6576 40 1 3.6702 2.2677 2.1864 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535148_5000100.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:20 Heat of formation + Delta-G solvation = 6.256440 kcal Electronic energy + Delta-G solvation = -23723.613807 eV Core-core repulsion = 20100.063389 eV Total energy + Delta-G solvation = -3623.550417 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.029 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -42.91850 -41.18373 -39.31385 -38.00571 -35.14123 -34.39053 -32.43132 -31.32125 -30.55492 -29.74719 -27.42172 -27.01385 -26.86760 -24.19651 -23.25973 -21.75095 -20.75094 -20.31496 -19.01286 -18.33545 -17.49045 -17.20017 -17.06135 -16.54457 -16.20997 -16.00056 -15.77355 -15.56999 -15.26717 -15.17848 -15.03415 -14.65775 -14.53807 -14.43398 -14.04726 -13.94493 -13.75498 -13.66126 -13.45446 -13.19453 -12.96829 -12.69319 -12.41669 -12.22202 -12.05954 -11.63902 -11.53559 -11.36246 -11.13540 -10.94960 -10.79829 -10.23125 -9.89410 -9.33695 -8.67469 -4.58700 0.16895 0.34512 0.65439 0.91723 1.22423 1.49584 1.58578 1.67668 2.03708 2.15420 2.23184 3.00428 3.27931 3.29958 3.39962 3.50181 3.59417 3.68130 3.73449 4.10948 4.12409 4.14104 4.18402 4.25914 4.28570 4.32618 4.37248 4.38952 4.54603 4.58204 4.60047 4.66792 4.72367 4.73572 4.89238 4.95269 5.03149 5.18338 5.44876 5.56956 5.78599 6.13533 6.31007 7.02167 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 S -0.264 6.264 3 C -0.076 4.076 4 C -0.096 4.096 5 H 0.100 0.900 6 C -0.135 4.135 7 C 0.123 3.877 8 H 0.107 0.893 9 N -0.700 5.700 10 C 0.596 3.404 11 O -0.537 6.537 12 C -0.040 4.040 13 C -0.103 4.103 14 C -0.181 4.181 15 Br 0.073 6.927 16 C 0.063 3.937 17 C -0.044 4.044 18 O -0.532 6.532 19 Si 0.582 3.418 20 N -0.381 5.381 21 C 0.052 3.948 22 C -0.142 4.142 23 H 0.076 0.924 24 H 0.076 0.924 25 H 0.102 0.898 26 H 0.083 0.917 27 H 0.083 0.917 28 H 0.100 0.900 29 H 0.080 0.920 30 H 0.405 0.595 31 H 0.158 0.842 32 H 0.130 0.870 33 H 0.378 0.622 34 H -0.248 1.248 35 H -0.231 1.231 36 H 0.082 0.918 37 H 0.105 0.895 38 H 0.106 0.894 39 H 0.077 0.923 40 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.763 0.206 -2.833 4.715 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.038 6.038 3 C -0.224 4.224 4 C -0.115 4.115 5 H 0.118 0.882 6 C -0.175 4.175 7 C 0.018 3.982 8 H 0.125 0.875 9 N -0.351 5.351 10 C 0.383 3.617 11 O -0.415 6.415 12 C -0.154 4.154 13 C -0.130 4.130 14 C -0.266 4.266 15 Br 0.157 6.843 16 C -0.060 4.060 17 C -0.154 4.154 18 O -0.338 6.338 19 Si 0.479 3.521 20 N -0.053 5.053 21 C -0.088 4.088 22 C -0.181 4.181 23 H 0.096 0.904 24 H 0.095 0.905 25 H 0.120 0.880 26 H 0.102 0.898 27 H 0.102 0.898 28 H 0.118 0.882 29 H 0.098 0.902 30 H 0.240 0.760 31 H 0.176 0.824 32 H 0.148 0.852 33 H 0.226 0.774 34 H -0.171 1.171 35 H -0.154 1.154 36 H 0.100 0.900 37 H 0.123 0.877 38 H 0.125 0.875 39 H 0.096 0.904 40 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -2.016 -0.437 -2.325 3.108 hybrid contribution -1.419 1.903 0.509 2.428 sum -3.435 1.466 -1.816 4.153 Atomic orbital electron populations 1.23397 0.94036 1.06747 1.04941 1.87046 1.07522 1.11152 1.98047 1.23425 0.99272 0.94635 1.05049 1.22396 0.92692 0.97452 0.98977 0.88204 1.23410 0.97660 0.96366 1.00070 1.21837 0.82384 0.97547 0.96475 0.87481 1.45275 1.05663 1.61494 1.22644 1.16803 0.82270 0.77695 0.84889 1.90824 1.87023 1.46047 1.17637 1.20033 0.85734 1.12840 0.96790 1.21149 0.94909 1.01563 0.95362 1.20517 0.95245 1.14960 0.95894 1.96312 1.73701 1.79760 1.34520 1.20891 0.93132 1.01855 0.90093 1.24755 0.88659 0.92860 1.09086 1.86570 1.82506 1.16353 1.48344 0.93258 0.82830 0.96290 0.79737 1.43826 1.03943 1.42136 1.15359 1.22730 1.04948 1.00098 0.81037 1.23507 0.98416 0.99766 0.96385 0.90449 0.90457 0.87965 0.89823 0.89812 0.88169 0.90179 0.75983 0.82399 0.85240 0.77400 1.17141 1.15441 0.89988 0.87723 0.87548 0.90448 0.88695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.19 10.76 101.05 1.09 1.27 16 2 S -0.26 -0.11 22.37 -107.50 -2.40 -2.52 16 3 C -0.08 0.15 5.78 37.16 0.21 0.36 16 4 C -0.10 0.24 3.53 -89.81 -0.32 -0.08 16 5 H 0.10 -0.22 8.13 -51.93 -0.42 -0.64 16 6 C -0.14 0.45 7.39 -25.92 -0.19 0.26 16 7 C 0.12 -0.18 4.29 -67.12 -0.29 -0.47 16 8 H 0.11 0.00 7.53 -51.93 -0.39 -0.39 16 9 N -0.70 0.84 5.25 -54.32 -0.29 0.56 16 10 C 0.60 1.01 7.77 -12.85 -0.10 0.91 16 11 O -0.54 -2.53 14.25 5.20 0.07 -2.45 16 12 C -0.04 -0.05 6.88 -81.98 -0.56 -0.61 16 13 C -0.10 0.04 10.34 -39.10 -0.40 -0.37 16 14 C -0.18 -0.07 6.15 -39.94 -0.25 -0.32 16 15 Br 0.07 -0.06 28.24 -68.01 -1.92 -1.99 16 16 C 0.06 0.06 6.15 -81.91 -0.50 -0.44 16 17 C -0.04 -0.02 2.99 36.00 0.11 0.09 16 18 O -0.53 -0.29 10.11 -35.23 -0.36 -0.64 16 19 Si 0.58 0.54 27.10 -169.99 -4.61 -4.07 16 20 N -0.38 -0.54 3.16 -115.59 -0.37 -0.91 16 21 C 0.05 0.03 10.22 59.85 0.61 0.64 16 22 C -0.14 0.20 7.43 -25.91 -0.19 0.01 16 23 H 0.08 -0.16 8.14 -51.92 -0.42 -0.59 16 24 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 25 H 0.10 -0.19 8.14 -51.92 -0.42 -0.61 16 26 H 0.08 -0.20 7.84 -51.93 -0.41 -0.60 16 27 H 0.08 -0.21 8.14 -51.92 -0.42 -0.63 16 28 H 0.10 -0.40 8.10 -51.93 -0.42 -0.82 16 29 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 30 H 0.40 -1.40 7.60 -40.82 -0.31 -1.71 16 31 H 0.16 -0.51 7.45 -52.49 -0.39 -0.90 16 32 H 0.13 -0.05 7.96 -51.93 -0.41 -0.47 16 33 H 0.38 -0.70 8.31 45.56 0.38 -0.32 16 34 H -0.25 -0.78 7.11 56.52 0.40 -0.37 16 35 H -0.23 -0.80 7.11 56.52 0.40 -0.40 16 36 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 37 H 0.10 -0.08 5.25 -51.93 -0.27 -0.35 16 38 H 0.11 0.16 6.11 -51.93 -0.32 -0.16 16 39 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 40 H 0.09 -0.16 7.90 -51.93 -0.41 -0.57 16 LS Contribution 353.56 15.07 5.33 5.33 Total: 0.00 -6.23 353.56 -10.86 -17.08 By element: Atomic # 1 Polarization: -6.12 SS G_CDS: -5.53 Total: -11.65 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: -0.79 Total: 1.26 kcal Atomic # 7 Polarization: 0.30 SS G_CDS: -0.65 Total: -0.35 kcal Atomic # 8 Polarization: -2.81 SS G_CDS: -0.28 Total: -3.10 kcal Atomic # 14 Polarization: 0.54 SS G_CDS: -4.61 Total: -4.07 kcal Atomic # 16 Polarization: -0.11 SS G_CDS: -2.40 Total: -2.52 kcal Atomic # 35 Polarization: -0.06 SS G_CDS: -1.92 Total: -1.99 kcal Total LS contribution 5.33 Total: 5.33 kcal Total: -6.23 -10.86 -17.08 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535148_5000100.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.339 kcal (2) G-P(sol) polarization free energy of solvation -6.225 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.114 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.857 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.083 kcal (6) G-S(sol) free energy of system = (1) + (5) 6.256 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds