Wall clock time and date at job start Tue Mar 9 2021 13:09:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81398 * 1 3 3 C 1.81402 * 102.99870 * 2 1 4 4 C 1.53005 * 109.46924 * 179.97438 * 3 2 1 5 5 H 1.09000 * 112.84665 * 43.80565 * 4 3 2 6 6 C 1.53781 * 113.61158 * 175.00056 * 4 3 2 7 7 C 1.53784 * 87.07783 * 140.06544 * 6 4 3 8 8 H 1.09001 * 113.61442 * 219.93036 * 7 6 4 9 9 N 1.46496 * 113.61657 * 89.11457 * 7 6 4 10 10 C 1.34777 * 120.00271 * 154.99545 * 9 7 6 11 11 O 1.21278 * 119.99854 * 0.02562 * 10 9 7 12 12 C 1.50703 * 120.00161 * 180.02562 * 10 9 7 13 13 N 1.46899 * 109.47107 * 180.02562 * 12 10 9 14 14 C 1.46902 * 111.00255 * 293.95458 * 13 12 10 15 15 C 1.39669 * 110.99989 * 170.00090 * 13 12 10 16 16 C 1.38900 * 120.07638 * 240.00226 * 15 13 12 17 17 C 1.50696 * 120.03361 * 359.97438 * 16 15 13 18 18 O 1.42907 * 109.47136 * 284.99884 * 17 16 15 19 19 Si 1.86305 * 109.47124 * 165.00084 * 17 16 15 20 20 C 1.38119 * 119.92545 * 179.97438 * 16 15 13 21 21 C 1.38259 * 120.07604 * 0.02562 * 20 16 15 22 22 C 1.50705 * 119.92575 * 179.97438 * 21 20 16 23 23 F 1.39906 * 109.46971 * 89.99897 * 22 21 20 24 24 F 1.39892 * 109.47320 * 209.99426 * 22 21 20 25 25 F 1.39895 * 109.47166 * 330.00263 * 22 21 20 26 26 C 1.38306 * 120.15092 * 359.97286 * 21 20 16 27 27 C 1.38081 * 120.07322 * 359.74712 * 26 21 20 28 28 C 1.53780 * 87.08167 * 334.56489 * 7 6 4 29 29 H 1.09002 * 109.47276 * 179.97438 * 1 2 3 30 30 H 1.08993 * 109.47319 * 300.00176 * 1 2 3 31 31 H 1.09005 * 109.47180 * 60.00048 * 1 2 3 32 32 H 1.08995 * 109.47114 * 60.00119 * 3 2 1 33 33 H 1.08998 * 109.47197 * 299.99962 * 3 2 1 34 34 H 1.08995 * 113.61220 * 25.51549 * 6 4 3 35 35 H 1.09001 * 113.61268 * 254.60887 * 6 4 3 36 36 H 0.97005 * 120.00266 * 335.00128 * 9 7 6 37 37 H 1.09002 * 109.47152 * 60.00245 * 12 10 9 38 38 H 1.09001 * 109.46980 * 300.00345 * 12 10 9 39 39 H 1.09005 * 109.46528 * 59.99744 * 14 13 12 40 40 H 1.09000 * 109.46785 * 179.97438 * 14 13 12 41 41 H 1.08997 * 109.47044 * 300.00388 * 14 13 12 42 42 H 1.08995 * 109.47507 * 44.99935 * 17 16 15 43 43 H 0.96700 * 113.99552 * 60.00330 * 18 17 16 44 44 H 1.48494 * 109.99754 * 299.99899 * 19 17 16 45 45 H 1.48498 * 109.99788 * 61.31946 * 19 17 16 46 46 H 1.08005 * 119.96143 * 179.97438 * 20 16 15 47 47 H 1.08004 * 119.96295 * 180.02562 * 26 21 20 48 48 H 1.08002 * 120.03847 * 180.27180 * 27 26 21 49 49 H 1.09001 * 113.61356 * 139.97819 * 28 7 6 50 50 H 1.08995 * 113.61962 * 270.87997 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2220 1.7675 0.0000 4 6 3.7423 1.9400 0.0006 5 1 4.2448 1.2673 -0.6944 6 6 4.1962 3.4041 -0.1221 7 6 5.2881 3.0697 0.9079 8 1 5.4540 3.8596 1.6404 9 7 6.5315 2.5807 0.3072 10 6 7.6991 2.7218 0.9655 11 8 7.7202 3.2533 2.0554 12 6 8.9783 2.2193 0.3473 13 7 10.1005 2.4897 1.2559 14 6 10.3255 3.9342 1.3993 15 6 11.2607 1.8427 0.8247 16 6 11.8830 0.9097 1.6441 17 6 11.3073 0.5942 3.0006 18 8 11.5912 1.6679 3.9000 19 14 12.0701 -0.9770 3.6489 20 6 13.0300 0.2714 1.2143 21 6 13.5591 0.5606 -0.0299 22 6 14.8110 -0.1374 -0.4952 23 9 14.4657 -1.3114 -1.1735 24 9 15.5228 0.7056 -1.3552 25 9 15.6065 -0.4548 0.6109 26 6 12.9420 1.4891 -0.8484 27 6 11.7919 2.1267 -0.4273 28 6 4.3626 1.9478 1.4078 29 1 -0.3634 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8899 31 1 -0.3634 0.5138 -0.8900 32 1 1.8031 2.2371 0.8900 33 1 1.8031 2.2371 -0.8900 34 1 3.4596 4.1214 0.2397 35 1 4.5882 3.6586 -1.1068 36 1 6.5146 2.1553 -0.5644 37 1 9.1478 2.7284 -0.6015 38 1 8.9013 1.1458 0.1750 39 1 9.4282 4.4034 1.8028 40 1 11.1614 4.1061 2.0775 41 1 10.5536 4.3649 0.4244 42 1 10.2281 0.4664 2.9166 43 1 11.2236 2.5190 3.6249 44 1 11.7821 -2.1012 2.7225 45 1 13.5376 -0.8051 3.7982 46 1 13.5145 -0.4539 1.8512 47 1 13.3577 1.7124 -1.8199 48 1 11.3080 2.8484 -1.0687 49 1 4.8889 1.0267 1.6580 50 1 3.6715 2.2669 2.1879 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535148_6406254.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:29 Heat of formation + Delta-G solvation = -145.111545 kcal Electronic energy + Delta-G solvation = -36547.368900 eV Core-core repulsion = 31253.871753 eV Total energy + Delta-G solvation = -5293.497147 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 405.137 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -51.18345 -48.69722 -48.64089 -41.96124 -41.21968 -39.68650 -37.69613 -37.47848 -34.75511 -33.08342 -32.28225 -31.02230 -29.91846 -29.20788 -27.69823 -26.92851 -26.89045 -25.29431 -24.12572 -23.41799 -22.22078 -21.71540 -20.40882 -19.58549 -19.50629 -19.43595 -18.68684 -18.08787 -17.80280 -17.45510 -17.13794 -16.96924 -16.56896 -16.35410 -16.24737 -15.82406 -15.68905 -15.58687 -15.57115 -15.32108 -15.13939 -15.06863 -14.98347 -14.91148 -14.79087 -14.77845 -14.70916 -14.49310 -14.17209 -14.04385 -13.95405 -13.78155 -13.63115 -13.47125 -13.31971 -13.20070 -13.03874 -12.84147 -12.63519 -12.24067 -12.11293 -11.65190 -11.37862 -11.36642 -10.98407 -10.97385 -10.94277 -10.38840 -10.20474 -10.16931 -9.84275 -8.70378 -4.81262 -0.48848 -0.12803 0.62706 1.39680 1.47591 1.55632 1.56165 1.66461 1.72668 1.96989 2.05153 2.49894 2.64612 2.90629 3.26542 3.34730 3.37518 3.39772 3.43870 3.51510 3.56912 3.64032 3.78630 3.82186 3.87820 3.99126 4.01565 4.07442 4.09855 4.11714 4.16063 4.23235 4.27739 4.31781 4.36914 4.41139 4.50464 4.54223 4.57803 4.67185 4.70477 4.79961 4.83996 4.86911 4.89598 4.93165 4.99826 5.04885 5.22412 5.36913 5.46343 5.91219 6.31940 6.67919 7.09567 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.264 6.264 3 C -0.076 4.076 4 C -0.096 4.096 5 H 0.098 0.902 6 C -0.136 4.136 7 C 0.122 3.878 8 H 0.107 0.893 9 N -0.715 5.715 10 C 0.519 3.481 11 O -0.513 6.513 12 C 0.037 3.963 13 N -0.491 5.491 14 C 0.017 3.983 15 C 0.129 3.871 16 C -0.085 4.085 17 C -0.068 4.068 18 O -0.532 6.532 19 Si 0.735 3.265 20 C -0.067 4.067 21 C -0.177 4.177 22 C 0.508 3.492 23 F -0.174 7.174 24 F -0.174 7.174 25 F -0.175 7.175 26 C -0.055 4.055 27 C -0.145 4.145 28 C -0.142 4.142 29 H 0.102 0.898 30 H 0.077 0.923 31 H 0.076 0.924 32 H 0.083 0.917 33 H 0.083 0.917 34 H 0.098 0.902 35 H 0.077 0.923 36 H 0.401 0.599 37 H 0.074 0.926 38 H 0.109 0.891 39 H 0.101 0.899 40 H 0.076 0.924 41 H 0.032 0.968 42 H 0.084 0.916 43 H 0.368 0.632 44 H -0.247 1.247 45 H -0.249 1.249 46 H 0.139 0.861 47 H 0.142 0.858 48 H 0.137 0.863 49 H 0.076 0.924 50 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.277 2.224 -3.093 7.343 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.038 6.038 3 C -0.224 4.224 4 C -0.115 4.115 5 H 0.116 0.884 6 C -0.176 4.176 7 C 0.016 3.984 8 H 0.125 0.875 9 N -0.367 5.367 10 C 0.305 3.695 11 O -0.387 6.387 12 C -0.093 4.093 13 N -0.212 5.212 14 C -0.129 4.129 15 C 0.035 3.965 16 C -0.086 4.086 17 C -0.177 4.177 18 O -0.337 6.337 19 Si 0.634 3.366 20 C -0.085 4.085 21 C -0.178 4.178 22 C 0.454 3.546 23 F -0.155 7.155 24 F -0.155 7.155 25 F -0.156 7.156 26 C -0.074 4.074 27 C -0.165 4.165 28 C -0.180 4.180 29 H 0.121 0.879 30 H 0.096 0.904 31 H 0.095 0.905 32 H 0.102 0.898 33 H 0.101 0.899 34 H 0.117 0.883 35 H 0.096 0.904 36 H 0.235 0.765 37 H 0.091 0.909 38 H 0.127 0.873 39 H 0.119 0.881 40 H 0.094 0.906 41 H 0.051 0.949 42 H 0.102 0.898 43 H 0.216 0.784 44 H -0.171 1.171 45 H -0.174 1.174 46 H 0.156 0.844 47 H 0.160 0.840 48 H 0.155 0.845 49 H 0.095 0.905 50 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -4.840 0.444 -1.652 5.134 hybrid contribution -0.795 2.116 -2.801 3.599 sum -5.636 2.560 -4.453 7.625 Atomic orbital electron populations 1.23396 0.93981 1.06764 1.04958 1.87029 1.07593 1.11162 1.98048 1.23426 0.99309 0.94627 1.05029 1.22383 0.92640 0.97433 0.99033 0.88382 1.23402 0.97860 0.96309 0.99999 1.21796 0.82730 0.97473 0.96373 0.87540 1.45634 1.06340 1.62136 1.22582 1.20310 0.84533 0.79012 0.85670 1.90718 1.86275 1.41878 1.19825 1.22082 0.89245 1.03439 0.94535 1.59253 1.01883 1.12068 1.48003 1.22748 1.04688 0.84466 1.00980 1.18810 0.91286 0.94558 0.91858 1.20294 0.94611 0.95982 0.97741 1.25144 1.04409 1.00560 0.87586 1.86707 1.79626 1.19729 1.47676 0.92923 0.80102 0.74095 0.89490 1.20816 0.94780 0.98480 0.94395 1.19977 0.97247 1.02783 0.97786 1.18244 0.83949 0.77143 0.75289 1.93251 1.92082 1.49537 1.80640 1.93209 1.80256 1.70927 1.71102 1.93219 1.76033 1.93163 1.53173 1.20869 0.94202 0.93079 0.99277 1.21692 0.96824 1.01050 0.96970 1.23492 0.98478 0.99789 0.96276 0.87950 0.90409 0.90474 0.89806 0.89880 0.88312 0.90433 0.76452 0.90853 0.87301 0.88097 0.90571 0.94911 0.89774 0.78356 1.17127 1.17386 0.84371 0.84041 0.84524 0.90538 0.88787 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.21 10.76 101.05 1.09 1.30 16 2 S -0.26 -0.05 22.37 -107.50 -2.40 -2.46 16 3 C -0.08 0.16 5.78 37.16 0.21 0.38 16 4 C -0.10 0.27 3.53 -89.81 -0.32 -0.04 16 5 H 0.10 -0.25 8.13 -51.93 -0.42 -0.67 16 6 C -0.14 0.51 7.39 -25.92 -0.19 0.32 16 7 C 0.12 -0.27 4.32 -67.12 -0.29 -0.56 16 8 H 0.11 -0.06 7.46 -51.93 -0.39 -0.44 16 9 N -0.71 2.03 5.26 -53.02 -0.28 1.75 16 10 C 0.52 -0.41 7.56 -10.98 -0.08 -0.50 16 11 O -0.51 -1.51 13.91 5.56 0.08 -1.43 16 12 C 0.04 -0.10 5.03 -4.98 -0.03 -0.12 16 13 N -0.49 0.45 3.22 -180.32 -0.58 -0.13 16 14 C 0.02 -0.02 8.63 60.07 0.52 0.50 16 15 C 0.13 -0.03 4.61 -83.79 -0.39 -0.42 16 16 C -0.08 -0.11 5.28 -104.42 -0.55 -0.66 16 17 C -0.07 -0.08 2.30 36.00 0.08 0.01 16 18 O -0.53 -1.21 12.65 -35.23 -0.45 -1.65 16 19 Si 0.74 0.38 30.41 -169.99 -5.17 -4.79 16 20 C -0.07 -0.13 8.01 -39.62 -0.32 -0.45 16 21 C -0.18 -0.26 5.46 -104.59 -0.57 -0.83 16 22 C 0.51 1.17 3.36 36.01 0.12 1.29 16 23 F -0.17 -0.49 17.30 2.25 0.04 -0.46 16 24 F -0.17 -0.40 16.46 2.25 0.04 -0.36 16 25 F -0.17 -0.59 16.46 2.25 0.04 -0.56 16 26 C -0.06 0.02 9.39 -39.61 -0.37 -0.35 16 27 C -0.15 0.19 8.70 -39.38 -0.34 -0.15 16 28 C -0.14 0.27 7.43 -25.92 -0.19 0.08 16 29 H 0.10 -0.21 8.14 -51.92 -0.42 -0.63 16 30 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 31 H 0.08 -0.18 8.14 -51.92 -0.42 -0.61 16 32 H 0.08 -0.21 7.85 -51.93 -0.41 -0.62 16 33 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 34 H 0.10 -0.41 8.10 -51.93 -0.42 -0.83 16 35 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 36 H 0.40 -2.05 8.70 -40.82 -0.36 -2.41 16 37 H 0.07 -0.33 7.46 -51.93 -0.39 -0.72 16 38 H 0.11 -0.37 8.06 -51.93 -0.42 -0.79 16 39 H 0.10 0.03 5.88 -51.93 -0.31 -0.28 16 40 H 0.08 -0.09 7.53 -51.93 -0.39 -0.48 16 41 H 0.03 -0.07 7.49 -51.93 -0.39 -0.46 16 42 H 0.08 0.06 7.78 -51.93 -0.40 -0.35 16 43 H 0.37 0.36 7.59 45.56 0.35 0.70 16 44 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 45 H -0.25 -0.73 6.81 56.52 0.38 -0.34 16 46 H 0.14 0.31 4.48 -52.48 -0.23 0.08 16 47 H 0.14 -0.29 7.60 -52.48 -0.40 -0.69 16 48 H 0.14 -0.47 7.17 -52.49 -0.38 -0.85 16 49 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 50 H 0.09 -0.18 7.90 -51.93 -0.41 -0.59 16 LS Contribution 427.49 15.07 6.44 6.44 Total: 0.00 -6.29 427.49 -10.97 -17.26 By element: Atomic # 1 Polarization: -6.32 SS G_CDS: -7.11 Total: -13.43 kcal Atomic # 6 Polarization: 1.42 SS G_CDS: -1.62 Total: -0.19 kcal Atomic # 7 Polarization: 2.48 SS G_CDS: -0.86 Total: 1.62 kcal Atomic # 8 Polarization: -2.71 SS G_CDS: -0.37 Total: -3.08 kcal Atomic # 9 Polarization: -1.49 SS G_CDS: 0.11 Total: -1.37 kcal Atomic # 14 Polarization: 0.38 SS G_CDS: -5.17 Total: -4.79 kcal Atomic # 16 Polarization: -0.05 SS G_CDS: -2.40 Total: -2.46 kcal Total LS contribution 6.44 Total: 6.44 kcal Total: -6.29 -10.97 -17.26 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535148_6406254.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -127.849 kcal (2) G-P(sol) polarization free energy of solvation -6.288 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.137 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.975 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.262 kcal (6) G-S(sol) free energy of system = (1) + (5) -145.112 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds