Wall clock time and date at job start Tue Mar 9 2021 13:09:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81400 * 1 3 3 C 1.81405 * 102.99772 * 2 1 4 4 C 1.52999 * 109.47014 * 179.97438 * 3 2 1 5 5 H 1.09001 * 112.85276 * 316.19919 * 4 3 2 6 6 C 1.53778 * 113.61460 * 87.50532 * 4 3 2 7 7 C 1.53775 * 87.08414 * 139.98384 * 6 4 3 8 8 H 1.09006 * 113.69115 * 220.01365 * 7 6 4 9 9 N 1.46489 * 113.61843 * 89.11471 * 7 6 4 10 10 C 1.34778 * 119.99973 * 107.50228 * 9 7 6 11 11 O 1.21693 * 119.99881 * 0.02562 * 10 9 7 12 12 C 1.46678 * 119.99985 * 180.02562 * 10 9 7 13 13 C 1.37871 * 126.23273 * 180.02562 * 12 10 9 14 14 C 1.39845 * 107.08473 * 179.72886 * 13 12 10 15 15 C 1.35451 * 107.86192 * 0.41211 * 14 13 12 16 16 C 1.50699 * 125.56123 * 179.84555 * 15 14 13 17 17 O 1.42898 * 109.46964 * 119.69426 * 16 15 14 18 18 Si 1.86301 * 109.47146 * 359.69343 * 16 15 14 19 19 N 1.35531 * 108.87256 * 359.58359 * 15 14 13 20 20 C 1.53780 * 87.07877 * 334.56472 * 7 6 4 21 21 H 1.09004 * 109.47581 * 60.00028 * 1 2 3 22 22 H 1.08997 * 109.47086 * 179.97438 * 1 2 3 23 23 H 1.08998 * 109.47554 * 299.99766 * 1 2 3 24 24 H 1.09005 * 109.46883 * 60.00265 * 3 2 1 25 25 H 1.08995 * 109.47247 * 299.99851 * 3 2 1 26 26 H 1.08999 * 113.61399 * 25.42778 * 6 4 3 27 27 H 1.09004 * 113.61247 * 254.52977 * 6 4 3 28 28 H 0.96999 * 120.00357 * 287.50730 * 9 7 6 29 29 H 1.08002 * 126.45945 * 359.97438 * 13 12 10 30 30 H 1.08000 * 126.06573 * 180.25714 * 14 13 12 31 31 H 1.09002 * 109.46959 * 239.69396 * 16 15 14 32 32 H 0.96708 * 113.99549 * 180.02562 * 17 16 15 33 33 H 1.48498 * 110.00005 * 60.00183 * 18 16 15 34 34 H 1.48501 * 110.00049 * 181.31845 * 18 16 15 35 35 H 0.97004 * 125.67536 * 180.30438 * 19 15 14 36 36 H 1.09005 * 113.61329 * 139.98207 * 20 7 6 37 37 H 1.09000 * 113.61967 * 270.88797 * 20 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2220 1.7676 0.0000 4 6 3.7422 1.9400 0.0006 5 1 4.2443 1.2675 0.6962 6 6 4.3618 1.9484 -1.4068 7 6 5.2874 3.0702 -0.9071 8 1 5.4528 3.8604 -1.6396 9 7 6.5312 2.5812 -0.3072 10 6 7.6984 2.7227 -0.9662 11 8 7.7190 3.2570 -2.0594 12 6 8.9437 2.2326 -0.3658 13 6 10.2025 2.3101 -0.9226 14 6 11.0911 1.7301 -0.0118 15 6 10.3741 1.3094 1.0576 16 6 10.9373 0.6227 2.2751 17 8 10.6593 1.4080 3.4362 18 14 12.7803 0.4299 2.0825 19 7 9.0684 1.6120 0.8566 20 6 4.1961 3.4042 0.1235 21 1 -0.3634 0.5138 -0.8900 22 1 -0.3633 -1.0276 -0.0005 23 1 -0.3634 0.5138 0.8900 24 1 1.8031 2.2371 0.8901 25 1 1.8031 2.2372 -0.8900 26 1 3.6702 2.2676 -2.1864 27 1 4.8881 1.0274 -1.6576 28 1 6.5148 2.1556 0.5642 29 1 10.4554 2.7414 -1.8800 30 1 12.1591 1.6325 -0.1397 31 1 10.4785 -0.3601 2.3828 32 1 10.9941 1.0257 4.2590 33 1 13.4178 1.7629 1.9348 34 1 13.3434 -0.2744 3.2624 35 1 8.3427 1.4232 1.4719 36 1 4.5885 3.6585 1.1081 37 1 3.4591 4.1215 -0.2378 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16535148_6580494.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:09:32 Heat of formation + Delta-G solvation = 2.808845 kcal Electronic energy + Delta-G solvation = -19616.939178 eV Core-core repulsion = 16488.594883 eV Total energy + Delta-G solvation = -3128.344295 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.103 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -42.54836 -41.09448 -39.32878 -37.81470 -34.88995 -32.23465 -31.63054 -30.52457 -29.65106 -26.94776 -26.75944 -24.26677 -23.11827 -21.62584 -21.20475 -20.30276 -19.71291 -18.62488 -17.51325 -17.06435 -16.87230 -16.48156 -16.13414 -15.89970 -15.56281 -15.22894 -15.04567 -14.91878 -14.64841 -14.36675 -14.10642 -13.98301 -13.79613 -13.60527 -13.53840 -13.36592 -12.89472 -12.73891 -12.16720 -12.01896 -11.56815 -11.36586 -11.28428 -10.91775 -10.65412 -10.28288 -10.09079 -9.28073 -8.72130 -4.83290 0.26226 0.71640 1.21104 1.52914 1.65323 1.65827 1.88765 1.99090 2.16541 2.23242 3.24298 3.37987 3.50617 3.66919 3.71785 3.78901 3.80682 4.20685 4.23907 4.27560 4.28363 4.31025 4.37894 4.44681 4.49300 4.69435 4.73070 4.77909 4.85089 4.93220 4.97461 4.99349 5.09037 5.10382 5.47042 5.59605 5.77276 6.24080 6.41108 6.52623 6.99097 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.112 4.112 2 S -0.323 6.323 3 C -0.062 4.062 4 C -0.088 4.088 5 H 0.096 0.904 6 C -0.141 4.141 7 C 0.112 3.888 8 H 0.091 0.909 9 N -0.700 5.700 10 C 0.592 3.408 11 O -0.568 6.568 12 C -0.066 4.066 13 C -0.115 4.115 14 C -0.208 4.208 15 C 0.069 3.931 16 C -0.067 4.067 17 O -0.561 6.561 18 Si 0.789 3.211 19 N -0.514 5.514 20 C -0.119 4.119 21 H 0.084 0.916 22 H 0.104 0.896 23 H 0.085 0.915 24 H 0.094 0.906 25 H 0.091 0.909 26 H 0.099 0.901 27 H 0.059 0.941 28 H 0.408 0.592 29 H 0.149 0.851 30 H 0.168 0.832 31 H 0.106 0.894 32 H 0.401 0.599 33 H -0.300 1.300 34 H -0.280 1.280 35 H 0.427 0.573 36 H 0.087 0.913 37 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.145 -3.068 4.436 5.804 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.280 4.280 2 S -0.098 6.098 3 C -0.210 4.210 4 C -0.107 4.107 5 H 0.114 0.886 6 C -0.180 4.180 7 C 0.006 3.994 8 H 0.109 0.891 9 N -0.351 5.351 10 C 0.381 3.619 11 O -0.447 6.447 12 C -0.180 4.180 13 C -0.142 4.142 14 C -0.231 4.231 15 C -0.050 4.050 16 C -0.175 4.175 17 O -0.372 6.372 18 Si 0.692 3.308 19 N -0.111 5.111 20 C -0.159 4.159 21 H 0.103 0.897 22 H 0.122 0.878 23 H 0.104 0.896 24 H 0.113 0.887 25 H 0.109 0.891 26 H 0.117 0.883 27 H 0.078 0.922 28 H 0.244 0.756 29 H 0.167 0.833 30 H 0.185 0.815 31 H 0.124 0.876 32 H 0.253 0.747 33 H -0.227 1.227 34 H -0.206 1.206 35 H 0.266 0.734 36 H 0.106 0.894 37 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges -1.189 -3.027 3.641 4.882 hybrid contribution -1.617 0.915 1.649 2.485 sum -2.806 -2.112 5.290 6.350 Atomic orbital electron populations 1.23403 0.91721 1.07168 1.05745 1.87209 1.10289 1.14083 1.98191 1.23424 0.99216 0.92462 1.05904 1.22316 0.92583 0.97869 0.97963 0.88575 1.23490 0.98420 0.98766 0.97281 1.21912 0.82776 0.97411 0.97279 0.89081 1.45431 1.05950 1.61299 1.22414 1.17195 0.82570 0.77921 0.84207 1.90839 1.86711 1.45480 1.21643 1.20284 0.95444 1.11958 0.90308 1.21492 0.90499 1.01560 1.00639 1.20904 1.00563 1.06673 0.94999 1.20246 0.83523 1.03945 0.97255 1.24770 1.13840 0.95773 0.83116 1.86520 1.81273 1.51594 1.17834 0.93399 0.70154 0.80894 0.86305 1.41860 1.08944 1.44886 1.15386 1.23358 0.96802 0.96014 0.99742 0.89711 0.87781 0.89556 0.88745 0.89081 0.88261 0.92186 0.75601 0.83300 0.81506 0.87626 0.74716 1.22701 1.20623 0.73363 0.89422 0.86868 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.36 10.76 113.37 1.22 1.58 16 2 S -0.32 -0.46 22.37 -56.49 -1.26 -1.73 16 3 C -0.06 0.24 5.78 71.98 0.42 0.66 16 4 C -0.09 0.37 3.53 -10.27 -0.04 0.34 16 5 H 0.10 -0.36 8.13 -2.39 -0.02 -0.38 16 6 C -0.14 0.13 7.43 31.12 0.23 0.36 16 7 C 0.11 -0.03 4.32 45.52 0.20 0.17 16 8 H 0.09 0.36 7.46 -2.38 -0.02 0.34 16 9 N -0.70 -0.27 5.26 -444.02 -2.33 -2.60 16 10 C 0.59 4.55 7.79 86.45 0.67 5.22 16 11 O -0.57 -9.05 16.48 -4.33 -0.07 -9.12 16 12 C -0.07 -0.36 7.06 40.35 0.28 -0.08 16 13 C -0.12 -0.72 10.65 22.57 0.24 -0.48 16 14 C -0.21 -0.49 9.32 22.01 0.21 -0.29 16 15 C 0.07 0.05 6.51 41.34 0.27 0.31 16 16 C -0.07 0.28 3.07 71.24 0.22 0.50 16 17 O -0.56 1.19 12.86 -148.98 -1.92 -0.73 16 18 Si 0.79 -3.61 30.54 68.60 2.10 -1.52 16 19 N -0.51 -0.05 5.99 -171.93 -1.03 -1.08 16 20 C -0.12 0.70 7.39 31.12 0.23 0.93 16 21 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 22 H 0.10 -0.38 8.14 -2.39 -0.02 -0.40 16 23 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 24 H 0.09 -0.54 8.14 -2.39 -0.02 -0.56 16 25 H 0.09 -0.44 7.84 -2.39 -0.02 -0.46 16 26 H 0.10 -0.17 7.90 -2.39 -0.02 -0.19 16 27 H 0.06 0.16 8.14 -2.38 -0.02 0.14 16 28 H 0.41 -2.13 7.83 -92.71 -0.73 -2.86 16 29 H 0.15 0.94 8.06 -2.91 -0.02 0.91 16 30 H 0.17 -0.33 6.17 -2.91 -0.02 -0.35 16 31 H 0.11 -0.97 7.96 -2.39 -0.02 -0.99 16 32 H 0.40 -4.06 8.74 -74.05 -0.65 -4.70 16 33 H -0.30 -1.15 7.11 99.48 0.71 -0.45 16 34 H -0.28 0.32 7.11 99.48 0.71 1.03 16 35 H 0.43 -2.28 8.19 -92.71 -0.76 -3.04 16 36 H 0.09 -0.64 8.14 -2.38 -0.02 -0.66 16 37 H 0.11 -0.89 8.10 -2.39 -0.02 -0.91 16 Total: 0.00 -20.58 326.55 -1.36 -21.95 By element: Atomic # 1 Polarization: -13.39 SS G_CDS: -0.99 Total: -14.38 kcal Atomic # 6 Polarization: 5.07 SS G_CDS: 4.15 Total: 9.22 kcal Atomic # 7 Polarization: -0.32 SS G_CDS: -3.37 Total: -3.69 kcal Atomic # 8 Polarization: -7.87 SS G_CDS: -1.99 Total: -9.85 kcal Atomic # 14 Polarization: -3.61 SS G_CDS: 2.10 Total: -1.52 kcal Atomic # 16 Polarization: -0.46 SS G_CDS: -1.26 Total: -1.73 kcal Total: -20.58 -1.36 -21.95 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535148_6580494.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 24.754 kcal (2) G-P(sol) polarization free energy of solvation -20.583 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.171 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.362 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.945 kcal (6) G-S(sol) free energy of system = (1) + (5) 2.809 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds