Wall clock time and date at job start Tue Mar 9 2021 13:10:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.42899 * 114.00178 * 2 1 4 4 C 1.53006 * 109.47272 * 179.97438 * 3 2 1 5 5 H 1.09003 * 112.90394 * 43.75056 * 4 3 2 6 6 C 1.53773 * 113.61597 * 174.99942 * 4 3 2 7 7 C 1.53781 * 87.08088 * 139.98387 * 6 4 3 8 8 H 1.09005 * 113.61524 * 219.93686 * 7 6 4 9 9 N 1.46499 * 113.61459 * 89.11951 * 7 6 4 10 10 C 1.34772 * 120.00318 * 156.52930 * 9 7 6 11 11 O 1.21625 * 119.99782 * 359.97438 * 10 9 7 12 12 C 1.47301 * 120.00162 * 179.97438 * 10 9 7 13 13 C 1.40296 * 120.13071 * 179.97438 * 12 10 9 14 14 O 1.35652 * 120.12365 * 0.04158 * 13 12 10 15 15 C 1.42899 * 116.99860 * 179.97438 * 14 13 12 16 16 C 1.38446 * 119.75292 * 180.02562 * 13 12 10 17 17 C 1.38685 * 120.03503 * 0.02562 * 16 13 12 18 18 O 1.35713 * 119.86311 * 179.97438 * 17 16 13 19 19 C 1.42908 * 117.00115 * 359.97438 * 18 17 16 20 20 C 1.39184 * 120.27186 * 359.97438 * 17 16 13 21 21 C 1.50695 * 119.87516 * 179.97438 * 20 17 16 22 22 O 1.42898 * 109.47516 * 284.99610 * 21 20 17 23 23 Si 1.86309 * 109.46885 * 164.99889 * 21 20 17 24 24 C 1.37539 * 120.24211 * 359.97438 * 20 17 16 25 25 C 1.53776 * 87.17283 * 334.52584 * 7 6 4 26 26 H 1.09001 * 109.46881 * 59.99635 * 1 2 3 27 27 H 1.09004 * 109.47444 * 179.97438 * 1 2 3 28 28 H 1.08999 * 109.47456 * 300.00276 * 1 2 3 29 29 H 1.09007 * 109.46697 * 60.00101 * 3 2 1 30 30 H 1.08992 * 109.47180 * 299.99940 * 3 2 1 31 31 H 1.09004 * 113.61509 * 25.43492 * 6 4 3 32 32 H 1.09000 * 113.69170 * 254.54436 * 6 4 3 33 33 H 0.97004 * 119.99530 * 336.52664 * 9 7 6 34 34 H 1.08998 * 109.47719 * 300.00563 * 15 14 13 35 35 H 1.08999 * 109.47109 * 60.00545 * 15 14 13 36 36 H 1.09006 * 109.47101 * 180.02562 * 15 14 13 37 37 H 1.08003 * 119.97987 * 180.26815 * 16 13 12 38 38 H 1.09001 * 109.46704 * 60.00311 * 19 18 17 39 39 H 1.09003 * 109.46917 * 179.97438 * 19 18 17 40 40 H 1.08998 * 109.46866 * 300.00066 * 19 18 17 41 41 H 1.08996 * 109.47693 * 44.99946 * 21 20 17 42 42 H 0.96706 * 113.99510 * 59.99865 * 22 21 20 43 43 H 1.48498 * 109.99776 * 299.99644 * 23 21 20 44 44 H 1.48504 * 109.99864 * 61.31714 * 23 21 20 45 45 H 1.07997 * 120.02051 * 179.97438 * 24 20 17 46 46 H 1.08997 * 113.61542 * 140.02180 * 25 7 6 47 47 H 1.09003 * 113.61695 * 270.92525 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 3.5355 1.1846 0.0006 5 1 3.9014 0.4279 -0.6934 6 6 4.2605 2.5351 -0.1221 7 6 5.2672 1.9993 0.9095 8 1 5.5798 2.7436 1.6420 9 7 6.3954 1.2818 0.3107 10 6 7.5578 1.1717 0.9838 11 8 7.6703 1.6684 2.0882 12 6 8.6919 0.4497 0.3818 13 6 9.9034 0.3339 1.0799 14 8 10.0345 0.8857 2.3122 15 6 11.2967 0.7271 2.9630 16 6 10.9644 -0.3459 0.5065 17 6 10.8284 -0.9091 -0.7535 18 8 11.8710 -1.5743 -1.3124 19 6 13.0752 -1.6538 -0.5470 20 6 9.6272 -0.7950 -1.4471 21 6 9.4894 -1.4099 -2.8160 22 8 10.1916 -0.6108 -3.7701 23 14 7.6872 -1.4923 -3.2812 24 6 8.5654 -0.1230 -0.8878 25 6 4.1454 1.0748 1.4110 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3634 -1.0277 -0.0005 28 1 -0.3634 0.5139 0.8899 29 1 1.6886 1.8463 0.8901 30 1 1.6886 1.8463 -0.8899 31 1 3.6737 3.3801 0.2384 32 1 4.6953 2.7110 -1.1060 33 1 6.3057 0.8859 -0.5704 34 1 11.5075 -0.3343 3.0934 35 1 12.0789 1.1807 2.3544 36 1 11.2665 1.2137 3.9380 37 1 11.8973 -0.4410 1.0425 38 1 12.8738 -2.1637 0.3951 39 1 13.8260 -2.2106 -1.1078 40 1 13.4440 -0.6483 -0.3445 41 1 9.9085 -2.4161 -2.8062 42 1 11.1378 -0.5240 -3.5901 43 1 6.9460 -2.3208 -2.2967 44 1 7.1120 -0.1241 -3.3292 45 1 7.6351 -0.0362 -1.4293 46 1 4.4870 0.0710 1.6636 47 1 3.5272 1.5211 2.1900 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535612_12297780.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:14 Heat of formation + Delta-G solvation = -123.680601 kcal Electronic energy + Delta-G solvation = -30270.176328 eV Core-core repulsion = 26001.036509 eV Total energy + Delta-G solvation = -4269.139819 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.165 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.15180 -41.10539 -40.19779 -39.34072 -38.41577 -38.07632 -36.92824 -34.34509 -32.23997 -31.78067 -29.64804 -29.16234 -28.28116 -26.98406 -26.63668 -26.06924 -24.84206 -23.61661 -22.76335 -21.59132 -20.32406 -19.99574 -18.74537 -18.53133 -17.75738 -17.41255 -17.31378 -17.22092 -16.92524 -16.67272 -16.65654 -16.39690 -16.24764 -15.83153 -15.67922 -15.59523 -15.32953 -14.83331 -14.35920 -14.29924 -14.15185 -13.95831 -13.76133 -13.61067 -13.46384 -13.34917 -12.86597 -12.83214 -12.68206 -12.58965 -12.38567 -12.17512 -11.85249 -11.74240 -11.55726 -11.32417 -11.26570 -11.06679 -10.68389 -10.57636 -10.01322 -9.93829 -9.18245 -4.85004 -0.27248 0.07485 1.35067 1.63573 1.82189 1.89558 1.91215 2.09428 2.13154 2.65598 2.76545 3.35959 3.45081 3.48388 3.58817 3.66350 3.68109 3.85492 3.89112 3.93524 3.94624 3.98919 4.05131 4.08518 4.09873 4.18609 4.29931 4.33796 4.35198 4.41116 4.42451 4.49453 4.54586 4.57017 4.68148 4.72082 4.73446 4.77713 4.79711 4.91182 4.99527 5.07486 5.09403 5.18428 5.23077 5.64608 5.88758 6.21593 6.22774 6.54696 6.60998 7.35437 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.391 6.391 3 C 0.070 3.930 4 C -0.111 4.111 5 H 0.096 0.904 6 C -0.138 4.138 7 C 0.122 3.878 8 H 0.107 0.893 9 N -0.716 5.716 10 C 0.569 3.431 11 O -0.514 6.514 12 C -0.206 4.206 13 C 0.233 3.767 14 O -0.273 6.273 15 C 0.018 3.982 16 C -0.308 4.308 17 C 0.209 3.791 18 O -0.306 6.306 19 C 0.022 3.978 20 C -0.188 4.188 21 C -0.068 4.068 22 O -0.536 6.536 23 Si 0.739 3.261 24 C -0.011 4.011 25 C -0.143 4.143 26 H 0.041 0.959 27 H 0.086 0.914 28 H 0.041 0.959 29 H 0.052 0.948 30 H 0.051 0.949 31 H 0.100 0.900 32 H 0.078 0.922 33 H 0.395 0.605 34 H 0.058 0.942 35 H 0.058 0.942 36 H 0.108 0.892 37 H 0.147 0.853 38 H 0.060 0.940 39 H 0.109 0.891 40 H 0.061 0.939 41 H 0.076 0.924 42 H 0.366 0.634 43 H -0.245 1.245 44 H -0.250 1.250 45 H 0.135 0.865 46 H 0.074 0.926 47 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.871 -1.797 -2.278 3.452 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.310 6.310 3 C -0.006 4.006 4 C -0.130 4.130 5 H 0.115 0.885 6 C -0.176 4.176 7 C 0.017 3.983 8 H 0.125 0.875 9 N -0.369 5.369 10 C 0.357 3.643 11 O -0.390 6.390 12 C -0.210 4.210 13 C 0.183 3.817 14 O -0.183 6.183 15 C -0.077 4.077 16 C -0.328 4.328 17 C 0.162 3.838 18 O -0.218 6.218 19 C -0.072 4.072 20 C -0.189 4.189 21 C -0.177 4.177 22 O -0.341 6.341 23 Si 0.637 3.363 24 C -0.030 4.030 25 C -0.182 4.182 26 H 0.060 0.940 27 H 0.105 0.895 28 H 0.060 0.940 29 H 0.070 0.930 30 H 0.069 0.931 31 H 0.118 0.882 32 H 0.096 0.904 33 H 0.230 0.770 34 H 0.076 0.924 35 H 0.076 0.924 36 H 0.126 0.874 37 H 0.164 0.836 38 H 0.079 0.921 39 H 0.127 0.873 40 H 0.079 0.921 41 H 0.094 0.906 42 H 0.213 0.787 43 H -0.169 1.169 44 H -0.175 1.175 45 H 0.152 0.848 46 H 0.093 0.907 47 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 0.562 -1.353 -1.516 2.109 hybrid contribution 1.518 0.226 0.955 1.807 sum 2.080 -1.127 -0.562 2.432 Atomic orbital electron populations 1.22759 0.80852 1.02959 1.00026 1.87893 1.19806 1.27877 1.95412 1.22555 0.92905 0.84885 1.00302 1.22662 0.93237 0.98282 0.98785 0.88528 1.23341 0.97042 0.97160 1.00103 1.21793 0.85138 0.94995 0.96376 0.87491 1.45580 1.12341 1.57741 1.21203 1.17772 0.81781 0.79674 0.85108 1.90846 1.82420 1.46790 1.18953 1.19073 0.94277 1.10956 0.96660 1.18689 0.91412 0.87455 0.84115 1.86407 1.35253 1.70255 1.26397 1.23254 0.84003 1.02050 0.98370 1.21289 1.01494 1.11385 0.98588 1.18708 0.87107 0.88057 0.89933 1.86039 1.21065 1.69741 1.44994 1.23231 0.84278 1.02562 0.97148 1.19447 0.92366 1.07599 0.99470 1.25092 1.11119 0.95489 0.85971 1.86714 1.24960 1.72757 1.49646 0.92934 0.71328 0.82454 0.89557 1.20761 0.97311 0.92214 0.92671 1.23534 0.97091 1.01120 0.96432 0.94018 0.89506 0.94016 0.92950 0.93082 0.88196 0.90366 0.76954 0.92381 0.92358 0.87370 0.83575 0.92141 0.87286 0.92071 0.90600 0.78659 1.16894 1.17531 0.84780 0.90730 0.88879 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 11.01 101.05 1.11 1.11 16 2 O -0.39 -1.01 10.70 -35.23 -0.38 -1.38 16 3 C 0.07 0.03 5.78 37.16 0.21 0.24 16 4 C -0.11 -0.02 3.90 -89.67 -0.35 -0.37 16 5 H 0.10 0.06 8.14 -51.93 -0.42 -0.36 16 6 C -0.14 0.11 7.38 -25.92 -0.19 -0.09 16 7 C 0.12 0.18 4.30 -67.12 -0.29 -0.11 16 8 H 0.11 0.30 7.50 -51.93 -0.39 -0.09 16 9 N -0.72 -1.70 5.21 -54.13 -0.28 -1.98 16 10 C 0.57 2.95 7.76 -12.58 -0.10 2.86 16 11 O -0.51 -4.35 14.77 -16.67 -0.25 -4.59 16 12 C -0.21 -0.84 5.89 -104.83 -0.62 -1.45 16 13 C 0.23 0.86 6.70 -38.73 -0.26 0.60 16 14 O -0.27 -1.17 8.56 -40.58 -0.35 -1.52 16 15 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 16 C -0.31 -0.40 8.01 -39.34 -0.31 -0.71 16 17 C 0.21 0.31 6.62 -39.07 -0.26 0.05 16 18 O -0.31 0.01 9.36 -18.84 -0.18 -0.17 16 19 C 0.02 -0.07 9.80 101.05 0.99 0.92 16 20 C -0.19 -0.39 5.27 -104.53 -0.55 -0.94 16 21 C -0.07 -0.06 2.32 36.00 0.08 0.03 16 22 O -0.54 -0.80 12.65 -35.23 -0.45 -1.24 16 23 Si 0.74 -0.26 30.40 -169.99 -5.17 -5.43 16 24 C -0.01 -0.03 8.14 -39.23 -0.32 -0.35 16 25 C -0.14 -0.17 7.45 -25.78 -0.19 -0.36 16 26 H 0.04 -0.04 8.14 -51.93 -0.42 -0.46 16 27 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 28 H 0.04 -0.03 8.14 -51.93 -0.42 -0.45 16 29 H 0.05 -0.02 7.85 -51.93 -0.41 -0.43 16 30 H 0.05 -0.02 8.14 -51.93 -0.42 -0.45 16 31 H 0.10 -0.19 8.10 -51.93 -0.42 -0.61 16 32 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 33 H 0.40 0.22 6.72 -40.82 -0.27 -0.05 16 34 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 35 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 36 H 0.11 -0.17 8.14 -51.93 -0.42 -0.59 16 37 H 0.15 -0.20 4.50 -52.48 -0.24 -0.43 16 38 H 0.06 -0.22 7.64 -51.93 -0.40 -0.62 16 39 H 0.11 -0.52 8.14 -51.93 -0.42 -0.94 16 40 H 0.06 -0.24 7.65 -51.93 -0.40 -0.63 16 41 H 0.08 0.00 7.82 -51.93 -0.41 -0.40 16 42 H 0.37 -0.17 8.59 45.56 0.39 0.22 16 43 H -0.24 -0.23 7.11 56.52 0.40 0.17 16 44 H -0.25 -0.27 6.80 56.52 0.38 0.11 16 45 H 0.14 0.15 3.24 -52.49 -0.17 -0.02 16 46 H 0.07 0.19 8.14 -51.93 -0.42 -0.23 16 47 H 0.09 0.04 7.90 -51.93 -0.41 -0.37 16 LS Contribution 381.80 15.07 5.75 5.75 Total: 0.00 -8.54 381.80 -8.27 -16.81 By element: Atomic # 1 Polarization: -1.74 SS G_CDS: -6.93 Total: -8.67 kcal Atomic # 6 Polarization: 2.46 SS G_CDS: -0.05 Total: 2.41 kcal Atomic # 7 Polarization: -1.70 SS G_CDS: -0.28 Total: -1.98 kcal Atomic # 8 Polarization: -7.31 SS G_CDS: -1.59 Total: -8.90 kcal Atomic # 14 Polarization: -0.26 SS G_CDS: -5.17 Total: -5.43 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -8.54 -8.27 -16.81 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_12297780.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.872 kcal (2) G-P(sol) polarization free energy of solvation -8.542 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.414 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.267 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.809 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.681 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds