Wall clock time and date at job start Tue Mar 9 2021 13:10:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42910 * 114.00172 * 2 1 4 4 C 1.53000 * 109.47144 * 179.97438 * 3 2 1 5 5 H 1.08994 * 112.90759 * 43.75033 * 4 3 2 6 6 C 1.53777 * 113.61078 * 174.99920 * 4 3 2 7 7 C 1.53784 * 87.08172 * 139.98329 * 6 4 3 8 8 H 1.09002 * 113.61454 * 219.93721 * 7 6 4 9 9 N 1.46499 * 113.61491 * 89.11442 * 7 6 4 10 10 C 1.34777 * 119.99665 * 155.28109 * 9 7 6 11 11 O 1.21553 * 120.00289 * 359.72074 * 10 9 7 12 12 C 1.47846 * 119.99557 * 179.72375 * 10 9 7 13 13 C 1.39545 * 120.14149 * 359.72520 * 12 10 9 14 14 C 1.38075 * 119.83993 * 179.72062 * 13 12 10 15 15 Br 1.89101 * 119.93658 * 180.27346 * 14 13 12 16 16 C 1.38424 * 120.12454 * 0.55317 * 14 13 12 17 17 C 1.38369 * 120.28211 * 359.71912 * 16 14 13 18 18 C 1.50698 * 119.91877 * 180.02562 * 17 16 14 19 19 O 1.42904 * 109.47186 * 119.98017 * 18 17 16 20 20 Si 1.86296 * 109.47376 * 359.97438 * 18 17 16 21 21 C 1.37935 * 120.15564 * 0.02562 * 17 16 14 22 22 C 1.53777 * 113.61370 * 272.49473 * 4 3 2 23 23 H 1.08999 * 109.46605 * 59.99521 * 1 2 3 24 24 H 1.08993 * 109.46840 * 180.02562 * 1 2 3 25 25 H 1.09003 * 109.46930 * 300.00416 * 1 2 3 26 26 H 1.09001 * 109.46632 * 59.99902 * 3 2 1 27 27 H 1.08997 * 109.46820 * 300.00468 * 3 2 1 28 28 H 1.08999 * 113.61756 * 25.43839 * 6 4 3 29 29 H 1.09001 * 113.61661 * 254.53110 * 6 4 3 30 30 H 0.97001 * 119.99790 * 334.99822 * 9 7 6 31 31 H 1.07997 * 120.07491 * 359.97438 * 13 12 10 32 32 H 1.07999 * 119.86073 * 179.74308 * 16 14 13 33 33 H 1.08998 * 109.47170 * 239.97736 * 18 17 16 34 34 H 0.96706 * 113.99694 * 300.00247 * 19 18 17 35 35 H 1.48506 * 110.00024 * 179.97438 * 20 18 17 36 36 H 1.48501 * 110.00291 * 301.31927 * 20 18 17 37 37 H 1.08008 * 120.06028 * 180.02562 * 21 17 16 38 38 H 1.08999 * 113.61239 * 105.47178 * 22 4 3 39 39 H 1.08999 * 113.61926 * 334.57412 * 22 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 3.5355 1.1847 0.0006 5 1 3.9015 0.4281 -0.6933 6 6 4.2604 2.5353 -0.1221 7 6 5.2673 1.9996 0.9095 8 1 5.5797 2.7439 1.6420 9 7 6.3954 1.2820 0.3107 10 6 7.5658 1.1936 0.9731 11 8 7.6869 1.7136 2.0651 12 6 8.7024 0.4643 0.3715 13 6 8.5648 -0.1386 -0.8795 14 6 9.6321 -0.8133 -1.4382 15 35 9.4511 -1.6246 -3.1366 16 6 10.8326 -0.9018 -0.7547 17 6 10.9730 -0.3108 0.4885 18 6 12.2838 -0.4117 1.2251 19 8 12.8021 0.8996 1.4570 20 14 13.4974 -1.3873 0.2023 21 6 9.9160 0.3706 1.0551 22 6 4.1442 1.0751 1.4086 23 1 -0.3632 0.5139 -0.8900 24 1 -0.3633 -1.0276 0.0005 25 1 -0.3633 0.5139 0.8900 26 1 1.6886 1.8464 0.8900 27 1 1.6886 1.8464 -0.8899 28 1 3.6737 3.3802 0.2385 29 1 4.6950 2.7098 -1.1064 30 1 6.2987 0.8670 -0.5607 31 1 7.6270 -0.0741 -1.4112 32 1 11.6634 -1.4341 -1.1939 33 1 12.1265 -0.9143 2.1794 34 1 12.9666 1.4060 0.6497 35 1 14.7945 -1.4935 0.9176 36 1 12.9560 -2.7425 -0.0727 37 1 10.0273 0.8317 2.0255 38 1 4.4848 0.0707 1.6600 39 1 3.5256 1.5207 2.1876 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535612_12335870.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:41 Heat of formation + Delta-G solvation = -52.313839 kcal Electronic energy + Delta-G solvation = -22975.434119 eV Core-core repulsion = 19318.010614 eV Total energy + Delta-G solvation = -3657.423505 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.046 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -41.76954 -40.72321 -39.44633 -38.22317 -37.71305 -34.73820 -33.64839 -32.90490 -30.50801 -29.76463 -27.19189 -27.01140 -26.75272 -25.50018 -23.47100 -22.83597 -21.71686 -20.39017 -19.21067 -17.90931 -17.77973 -17.41663 -17.26538 -16.94825 -16.59579 -16.45885 -16.25729 -15.95058 -15.67971 -15.38263 -14.98589 -14.74468 -14.42235 -14.28818 -14.17153 -13.79343 -13.56382 -13.33711 -13.03652 -12.92792 -12.45553 -12.21425 -11.99705 -11.96092 -11.93057 -11.65709 -11.50148 -11.37167 -11.10925 -10.65111 -10.62838 -10.32918 -10.11604 -9.95243 -5.15687 -0.53919 -0.20862 0.37090 1.13010 1.49880 1.56923 1.85020 1.93005 2.46744 2.70035 3.18830 3.27552 3.34765 3.42023 3.49488 3.69929 3.75063 3.80907 3.86741 3.93150 4.17885 4.21228 4.23632 4.29171 4.35868 4.43072 4.48326 4.50739 4.59019 4.63368 4.68925 4.72035 4.74662 4.89671 4.96637 4.98114 5.04297 5.07574 5.34406 5.48816 6.15925 6.32138 6.44706 7.06077 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.391 6.391 3 C 0.069 3.931 4 C -0.111 4.111 5 H 0.098 0.902 6 C -0.137 4.137 7 C 0.119 3.881 8 H 0.109 0.891 9 N -0.708 5.708 10 C 0.564 3.436 11 O -0.524 6.524 12 C -0.127 4.127 13 C -0.054 4.054 14 C -0.094 4.094 15 Br -0.032 7.032 16 C -0.064 4.064 17 C -0.119 4.119 18 C -0.067 4.067 19 O -0.535 6.535 20 Si 0.684 3.316 21 C -0.017 4.017 22 C -0.143 4.143 23 H 0.041 0.959 24 H 0.087 0.913 25 H 0.041 0.959 26 H 0.052 0.948 27 H 0.051 0.949 28 H 0.100 0.900 29 H 0.079 0.921 30 H 0.401 0.599 31 H 0.138 0.862 32 H 0.142 0.858 33 H 0.121 0.879 34 H 0.381 0.619 35 H -0.248 1.248 36 H -0.253 1.253 37 H 0.149 0.851 38 H 0.074 0.926 39 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.684 1.229 -4.585 5.036 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.310 6.310 3 C -0.007 4.007 4 C -0.129 4.129 5 H 0.116 0.884 6 C -0.175 4.175 7 C 0.014 3.986 8 H 0.127 0.873 9 N -0.359 5.359 10 C 0.351 3.649 11 O -0.401 6.401 12 C -0.131 4.131 13 C -0.074 4.074 14 C -0.174 4.174 15 Br 0.054 6.946 16 C -0.084 4.084 17 C -0.121 4.121 18 C -0.178 4.178 19 O -0.340 6.340 20 Si 0.585 3.415 21 C -0.036 4.036 22 C -0.182 4.182 23 H 0.060 0.940 24 H 0.105 0.895 25 H 0.060 0.940 26 H 0.070 0.930 27 H 0.069 0.931 28 H 0.118 0.882 29 H 0.097 0.903 30 H 0.237 0.763 31 H 0.156 0.844 32 H 0.159 0.841 33 H 0.138 0.862 34 H 0.228 0.772 35 H -0.173 1.173 36 H -0.178 1.178 37 H 0.167 0.833 38 H 0.093 0.907 39 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -1.101 0.235 -3.857 4.018 hybrid contribution -0.896 0.114 0.250 0.937 sum -1.996 0.349 -3.607 4.137 Atomic orbital electron populations 1.22762 0.80799 1.02993 1.00047 1.87893 1.19849 1.27841 1.95418 1.22559 0.92920 0.84927 1.00327 1.22616 0.93297 0.98276 0.98703 0.88354 1.23343 0.96932 0.97227 1.00040 1.21863 0.85113 0.95093 0.96546 0.87341 1.45569 1.11575 1.56380 1.22416 1.18091 0.82167 0.79726 0.84876 1.90827 1.82832 1.46426 1.19977 1.19945 0.95367 1.02294 0.95522 1.21286 0.97953 0.94196 0.93979 1.21646 0.96755 1.04078 0.94887 1.96849 1.98202 1.80070 1.19528 1.21226 0.96333 0.97189 0.93618 1.20381 0.97313 0.99550 0.94824 1.25084 0.95567 0.91768 1.05377 1.86551 1.85402 1.26049 1.36003 0.94819 0.79105 0.81018 0.86521 1.21297 0.89669 0.92995 0.99655 1.23491 0.96998 1.01063 0.96633 0.94001 0.89489 0.93993 0.92963 0.93080 0.88179 0.90255 0.76325 0.84401 0.84085 0.86169 0.77179 1.17274 1.17785 0.83335 0.90677 0.88815 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.09 16 2 O -0.39 -0.65 10.70 -35.23 -0.38 -1.02 16 3 C 0.07 -0.05 5.78 37.16 0.21 0.17 16 4 C -0.11 0.16 3.89 -89.81 -0.35 -0.19 16 5 H 0.10 -0.13 8.14 -51.93 -0.42 -0.55 16 6 C -0.14 0.36 7.39 -25.92 -0.19 0.17 16 7 C 0.12 -0.08 4.32 -67.12 -0.29 -0.37 16 8 H 0.11 0.09 7.47 -51.93 -0.39 -0.30 16 9 N -0.71 0.49 5.21 -53.96 -0.28 0.21 16 10 C 0.56 1.11 7.77 -12.33 -0.10 1.02 16 11 O -0.52 -3.00 15.95 5.32 0.08 -2.91 16 12 C -0.13 -0.07 5.87 -104.97 -0.62 -0.69 16 13 C -0.05 0.06 9.28 -39.15 -0.36 -0.31 16 14 C -0.09 0.07 6.22 -39.57 -0.25 -0.18 16 15 Br -0.03 0.02 33.69 -68.01 -2.29 -2.27 16 16 C -0.06 0.07 8.41 -39.46 -0.33 -0.26 16 17 C -0.12 0.07 5.38 -104.69 -0.56 -0.50 16 18 C -0.07 0.06 2.82 36.00 0.10 0.16 16 19 O -0.53 0.20 12.77 -35.23 -0.45 -0.25 16 20 Si 0.68 -1.20 29.78 -169.99 -5.06 -6.26 16 21 C -0.02 -0.01 9.15 -39.18 -0.36 -0.37 16 22 C -0.14 0.08 7.43 -25.92 -0.19 -0.11 16 23 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 24 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 25 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 26 H 0.05 -0.07 7.84 -51.93 -0.41 -0.48 16 27 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.10 -0.34 8.10 -51.93 -0.42 -0.76 16 29 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 30 H 0.40 -1.21 6.74 -40.82 -0.27 -1.48 16 31 H 0.14 -0.45 6.40 -52.49 -0.34 -0.79 16 32 H 0.14 -0.35 4.86 -52.49 -0.26 -0.61 16 33 H 0.12 -0.07 7.96 -51.93 -0.41 -0.49 16 34 H 0.38 -1.64 8.70 45.56 0.40 -1.25 16 35 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 36 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 37 H 0.15 0.27 7.65 -52.48 -0.40 -0.13 16 38 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 39 H 0.09 -0.09 7.89 -51.93 -0.41 -0.50 16 LS Contribution 347.64 15.07 5.24 5.24 Total: 0.00 -7.30 347.64 -10.38 -17.68 By element: Atomic # 1 Polarization: -4.98 SS G_CDS: -5.07 Total: -10.04 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: -2.17 Total: -0.36 kcal Atomic # 7 Polarization: 0.49 SS G_CDS: -0.28 Total: 0.21 kcal Atomic # 8 Polarization: -3.44 SS G_CDS: -0.74 Total: -4.19 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.06 Total: -6.26 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -2.29 Total: -2.27 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -7.30 -10.38 -17.68 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_12335870.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.638 kcal (2) G-P(sol) polarization free energy of solvation -7.301 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.939 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.375 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.676 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.314 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds