Wall clock time and date at job start Tue Mar 9 2021 13:10:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42910 * 114.00172 * 2 1 4 4 C 1.53000 * 109.47144 * 179.97438 * 3 2 1 5 5 H 1.08994 * 112.90759 * 43.75033 * 4 3 2 6 6 C 1.53777 * 113.61078 * 174.99920 * 4 3 2 7 7 C 1.53784 * 87.08172 * 139.98329 * 6 4 3 8 8 H 1.09002 * 113.61454 * 219.93721 * 7 6 4 9 9 N 1.46499 * 113.61491 * 89.11442 * 7 6 4 10 10 C 1.34777 * 119.99665 * 155.28109 * 9 7 6 11 11 O 1.21553 * 120.00289 * 359.72074 * 10 9 7 12 12 C 1.47846 * 119.99557 * 179.72375 * 10 9 7 13 13 C 1.39545 * 120.14149 * 359.72520 * 12 10 9 14 14 C 1.38075 * 119.83993 * 179.72062 * 13 12 10 15 15 Br 1.89101 * 119.93658 * 180.27346 * 14 13 12 16 16 C 1.38424 * 120.12454 * 0.55317 * 14 13 12 17 17 C 1.38369 * 120.28211 * 359.71912 * 16 14 13 18 18 C 1.50698 * 119.91877 * 180.02562 * 17 16 14 19 19 O 1.42904 * 109.47186 * 119.98017 * 18 17 16 20 20 Si 1.86296 * 109.47376 * 359.97438 * 18 17 16 21 21 C 1.37935 * 120.15564 * 0.02562 * 17 16 14 22 22 C 1.53777 * 113.61370 * 272.49473 * 4 3 2 23 23 H 1.08999 * 109.46605 * 59.99521 * 1 2 3 24 24 H 1.08993 * 109.46840 * 180.02562 * 1 2 3 25 25 H 1.09003 * 109.46930 * 300.00416 * 1 2 3 26 26 H 1.09001 * 109.46632 * 59.99902 * 3 2 1 27 27 H 1.08997 * 109.46820 * 300.00468 * 3 2 1 28 28 H 1.08999 * 113.61756 * 25.43839 * 6 4 3 29 29 H 1.09001 * 113.61661 * 254.53110 * 6 4 3 30 30 H 0.97001 * 119.99790 * 334.99822 * 9 7 6 31 31 H 1.07997 * 120.07491 * 359.97438 * 13 12 10 32 32 H 1.07999 * 119.86073 * 179.74308 * 16 14 13 33 33 H 1.08998 * 109.47170 * 239.97736 * 18 17 16 34 34 H 0.96706 * 113.99694 * 300.00247 * 19 18 17 35 35 H 1.48506 * 110.00024 * 179.97438 * 20 18 17 36 36 H 1.48501 * 110.00291 * 301.31927 * 20 18 17 37 37 H 1.08008 * 120.06028 * 180.02562 * 21 17 16 38 38 H 1.08999 * 113.61239 * 105.47178 * 22 4 3 39 39 H 1.08999 * 113.61926 * 334.57412 * 22 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 3.5355 1.1847 0.0006 5 1 3.9015 0.4281 -0.6933 6 6 4.2604 2.5353 -0.1221 7 6 5.2673 1.9996 0.9095 8 1 5.5797 2.7439 1.6420 9 7 6.3954 1.2820 0.3107 10 6 7.5658 1.1936 0.9731 11 8 7.6869 1.7136 2.0651 12 6 8.7024 0.4643 0.3715 13 6 8.5648 -0.1386 -0.8795 14 6 9.6321 -0.8133 -1.4382 15 35 9.4511 -1.6246 -3.1366 16 6 10.8326 -0.9018 -0.7547 17 6 10.9730 -0.3108 0.4885 18 6 12.2838 -0.4117 1.2251 19 8 12.8021 0.8996 1.4570 20 14 13.4974 -1.3873 0.2023 21 6 9.9160 0.3706 1.0551 22 6 4.1442 1.0751 1.4086 23 1 -0.3632 0.5139 -0.8900 24 1 -0.3633 -1.0276 0.0005 25 1 -0.3633 0.5139 0.8900 26 1 1.6886 1.8464 0.8900 27 1 1.6886 1.8464 -0.8899 28 1 3.6737 3.3802 0.2385 29 1 4.6950 2.7098 -1.1064 30 1 6.2987 0.8670 -0.5607 31 1 7.6270 -0.0741 -1.4112 32 1 11.6634 -1.4341 -1.1939 33 1 12.1265 -0.9143 2.1794 34 1 12.9666 1.4060 0.6497 35 1 14.7945 -1.4935 0.9176 36 1 12.9560 -2.7425 -0.0727 37 1 10.0273 0.8317 2.0255 38 1 4.4848 0.0707 1.6600 39 1 3.5256 1.5207 2.1876 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16535612_12335870.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:41 Heat of formation + Delta-G solvation = -50.765611 kcal Electronic energy + Delta-G solvation = -22975.366982 eV Core-core repulsion = 19318.010614 eV Total energy + Delta-G solvation = -3657.356369 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.046 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -41.80864 -40.67601 -39.50858 -38.22447 -37.68283 -34.81776 -33.62190 -32.87914 -30.46715 -29.69977 -27.14057 -26.95569 -26.66705 -25.50762 -23.42467 -22.81141 -21.74976 -20.35667 -19.20945 -17.88361 -17.76819 -17.37086 -17.25854 -16.90037 -16.56779 -16.43793 -16.22036 -16.04582 -15.71176 -15.34391 -14.98202 -14.76605 -14.37726 -14.28684 -14.12295 -13.72470 -13.46385 -13.28839 -13.04316 -12.84798 -12.39608 -12.20804 -11.97132 -11.96344 -11.84414 -11.60429 -11.48017 -11.30652 -11.23339 -10.61675 -10.58591 -10.35026 -10.10668 -9.92291 -5.05507 -0.54107 -0.17845 0.41882 1.20895 1.48143 1.59124 1.87234 1.95140 2.43758 2.79262 3.25513 3.32119 3.44332 3.53400 3.59555 3.77172 3.81238 3.85973 3.92880 3.97119 4.19739 4.26632 4.34092 4.39194 4.47101 4.47104 4.59500 4.61909 4.67949 4.74520 4.74934 4.81115 4.84645 4.90995 4.99595 5.05438 5.08841 5.13423 5.35349 5.52147 6.23299 6.32137 6.71180 6.99549 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.417 6.417 3 C 0.065 3.935 4 C -0.105 4.105 5 H 0.099 0.901 6 C -0.120 4.120 7 C 0.112 3.888 8 H 0.091 0.909 9 N -0.694 5.694 10 C 0.562 3.438 11 O -0.571 6.571 12 C -0.136 4.136 13 C -0.044 4.044 14 C -0.099 4.099 15 Br -0.027 7.027 16 C -0.061 4.061 17 C -0.116 4.116 18 C -0.075 4.075 19 O -0.552 6.552 20 Si 0.773 3.227 21 C -0.029 4.029 22 C -0.146 4.146 23 H 0.050 0.950 24 H 0.090 0.910 25 H 0.047 0.953 26 H 0.057 0.943 27 H 0.062 0.938 28 H 0.111 0.889 29 H 0.093 0.907 30 H 0.414 0.586 31 H 0.161 0.839 32 H 0.157 0.843 33 H 0.113 0.887 34 H 0.397 0.603 35 H -0.293 1.293 36 H -0.277 1.277 37 H 0.131 0.869 38 H 0.058 0.942 39 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.140 1.254 -6.383 6.848 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.337 6.337 3 C -0.011 4.011 4 C -0.124 4.124 5 H 0.117 0.883 6 C -0.158 4.158 7 C 0.006 3.994 8 H 0.109 0.891 9 N -0.345 5.345 10 C 0.350 3.650 11 O -0.451 6.451 12 C -0.140 4.140 13 C -0.065 4.065 14 C -0.178 4.178 15 Br 0.058 6.942 16 C -0.080 4.080 17 C -0.117 4.117 18 C -0.185 4.185 19 O -0.361 6.361 20 Si 0.678 3.322 21 C -0.049 4.049 22 C -0.184 4.184 23 H 0.069 0.931 24 H 0.108 0.892 25 H 0.065 0.935 26 H 0.075 0.925 27 H 0.080 0.920 28 H 0.130 0.870 29 H 0.111 0.889 30 H 0.252 0.748 31 H 0.178 0.822 32 H 0.174 0.826 33 H 0.130 0.870 34 H 0.247 0.753 35 H -0.221 1.221 36 H -0.203 1.203 37 H 0.149 0.851 38 H 0.077 0.923 39 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -1.599 0.276 -5.702 5.928 hybrid contribution -0.758 0.087 0.838 1.133 sum -2.357 0.363 -4.864 5.417 Atomic orbital electron populations 1.22876 0.79925 1.03501 1.00752 1.87853 1.21018 1.29245 1.95592 1.22684 0.93072 0.84291 1.01071 1.22581 0.93101 0.98967 0.97708 0.88290 1.23287 0.95660 0.96899 0.99987 1.21914 0.85201 0.94942 0.97296 0.89102 1.45489 1.10828 1.55595 1.22597 1.18353 0.83012 0.79251 0.84383 1.90800 1.83683 1.48620 1.22022 1.19847 0.94784 1.03031 0.96293 1.21449 0.98822 0.93078 0.93132 1.21738 0.96878 1.04090 0.95102 1.96863 1.98193 1.79983 1.19133 1.21391 0.96817 0.96617 0.93163 1.20344 0.96970 0.99361 0.95027 1.25259 0.95915 0.91905 1.05398 1.86513 1.85399 1.26462 1.37679 0.93820 0.75115 0.78569 0.84712 1.21250 0.90545 0.93748 0.99316 1.23500 0.97255 1.00084 0.97578 0.93108 0.89194 0.93453 0.92511 0.91982 0.87033 0.88852 0.74784 0.82199 0.82553 0.86986 0.75262 1.22106 1.20299 0.85117 0.92335 0.88652 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 11.01 113.37 1.25 1.21 16 2 O -0.42 -1.32 10.70 -148.98 -1.59 -2.92 16 3 C 0.06 -0.13 5.78 71.98 0.42 0.28 16 4 C -0.11 0.36 3.89 -10.27 -0.04 0.32 16 5 H 0.10 -0.34 8.14 -2.39 -0.02 -0.36 16 6 C -0.12 0.75 7.39 31.12 0.23 0.98 16 7 C 0.11 -0.09 4.32 45.52 0.20 0.11 16 8 H 0.09 0.29 7.47 -2.39 -0.02 0.27 16 9 N -0.69 0.70 5.21 -442.89 -2.31 -1.61 16 10 C 0.56 2.98 7.77 86.79 0.67 3.65 16 11 O -0.57 -7.96 15.95 -3.88 -0.06 -8.02 16 12 C -0.14 -0.25 5.87 -20.09 -0.12 -0.37 16 13 C -0.04 0.12 9.28 22.55 0.21 0.33 16 14 C -0.10 0.23 6.22 22.28 0.14 0.37 16 15 Br -0.03 0.07 33.69 -20.37 -0.69 -0.61 16 16 C -0.06 0.17 8.41 22.35 0.19 0.36 16 17 C -0.12 0.08 5.38 -19.91 -0.11 -0.02 16 18 C -0.08 0.10 2.82 71.24 0.20 0.30 16 19 O -0.55 0.04 12.77 -148.98 -1.90 -1.86 16 20 Si 0.77 -2.74 29.78 68.60 2.04 -0.70 16 21 C -0.03 -0.09 9.15 22.53 0.21 0.12 16 22 C -0.15 0.06 7.43 31.12 0.23 0.29 16 23 H 0.05 -0.18 8.14 -2.39 -0.02 -0.20 16 24 H 0.09 -0.24 8.14 -2.39 -0.02 -0.26 16 25 H 0.05 -0.14 8.14 -2.39 -0.02 -0.16 16 26 H 0.06 -0.18 7.84 -2.39 -0.02 -0.20 16 27 H 0.06 -0.27 8.14 -2.39 -0.02 -0.28 16 28 H 0.11 -0.90 8.10 -2.39 -0.02 -0.92 16 29 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 30 H 0.41 -2.77 6.74 -92.71 -0.62 -3.39 16 31 H 0.16 -1.27 6.40 -2.91 -0.02 -1.29 16 32 H 0.16 -0.98 4.86 -2.91 -0.01 -0.99 16 33 H 0.11 0.01 7.96 -2.39 -0.02 -0.01 16 34 H 0.40 -3.39 8.70 -74.05 -0.64 -4.03 16 35 H -0.29 -1.19 7.11 99.48 0.71 -0.48 16 36 H -0.28 -0.11 7.11 99.48 0.71 0.60 16 37 H 0.13 0.85 7.65 -2.91 -0.02 0.83 16 38 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 39 H 0.10 -0.09 7.89 -2.39 -0.02 -0.11 16 Total: 0.00 -18.49 347.64 -0.98 -19.47 By element: Atomic # 1 Polarization: -11.51 SS G_CDS: -0.14 Total: -11.65 kcal Atomic # 6 Polarization: 4.24 SS G_CDS: 3.67 Total: 7.91 kcal Atomic # 7 Polarization: 0.70 SS G_CDS: -2.31 Total: -1.61 kcal Atomic # 8 Polarization: -9.24 SS G_CDS: -3.56 Total: -12.80 kcal Atomic # 14 Polarization: -2.74 SS G_CDS: 2.04 Total: -0.70 kcal Atomic # 35 Polarization: 0.07 SS G_CDS: -0.69 Total: -0.61 kcal Total: -18.49 -0.98 -19.47 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_12335870.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.300 kcal (2) G-P(sol) polarization free energy of solvation -18.489 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.789 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.976 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.465 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.766 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds