Wall clock time and date at job start Tue Mar 9 2021 13:10:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42898 * 114.00186 * 2 1 4 4 C 1.52997 * 109.47319 * 180.02562 * 3 2 1 5 5 H 1.09006 * 112.85138 * 43.80466 * 4 3 2 6 6 C 1.53781 * 113.61559 * 175.00192 * 4 3 2 7 7 C 1.53782 * 87.08224 * 139.98357 * 6 4 3 8 8 H 1.09000 * 113.61755 * 220.02456 * 7 6 4 9 9 N 1.46500 * 113.61918 * 89.11528 * 7 6 4 10 10 C 1.34766 * 120.00277 * 155.00092 * 9 7 6 11 11 O 1.21587 * 120.00358 * 0.02562 * 10 9 7 12 12 C 1.47536 * 120.00221 * 180.02562 * 10 9 7 13 13 C 1.40141 * 120.19444 * 179.72300 * 12 10 9 14 14 O 1.35653 * 120.14849 * 359.97438 * 13 12 10 15 15 C 1.42893 * 117.00060 * 179.97438 * 14 13 12 16 16 C 1.38711 * 119.70044 * 179.78843 * 13 12 10 17 17 C 1.38055 * 120.08358 * 0.48879 * 16 13 12 18 18 C 1.38552 * 120.38830 * 359.73835 * 17 16 13 19 19 C 1.50701 * 119.84735 * 180.02562 * 18 17 16 20 20 O 1.42898 * 109.47144 * 120.02068 * 19 18 17 21 21 Si 1.86299 * 109.47208 * 0.02562 * 19 18 17 22 22 C 1.37783 * 120.30151 * 0.02821 * 18 17 16 23 23 C 1.53782 * 87.08134 * 334.56746 * 7 6 4 24 24 H 1.08999 * 109.46857 * 59.99535 * 1 2 3 25 25 H 1.08998 * 109.46946 * 179.97438 * 1 2 3 26 26 H 1.09001 * 109.46918 * 299.99649 * 1 2 3 27 27 H 1.09002 * 109.47259 * 300.00293 * 3 2 1 28 28 H 1.09001 * 109.47074 * 60.00315 * 3 2 1 29 29 H 1.09003 * 113.61181 * 254.52982 * 6 4 3 30 30 H 1.08994 * 113.61519 * 25.43167 * 6 4 3 31 31 H 0.97002 * 119.99257 * 335.00200 * 9 7 6 32 32 H 1.09001 * 109.47799 * 300.00015 * 15 14 13 33 33 H 1.08997 * 109.47265 * 60.00292 * 15 14 13 34 34 H 1.08999 * 109.47305 * 180.02562 * 15 14 13 35 35 H 1.08002 * 119.95653 * 180.20581 * 16 13 12 36 36 H 1.07997 * 119.80297 * 179.72002 * 17 16 13 37 37 H 1.09003 * 109.47294 * 240.02517 * 19 18 17 38 38 H 0.96697 * 114.00532 * 300.00533 * 20 19 18 39 39 H 1.48498 * 110.00226 * 180.02562 * 21 19 18 40 40 H 1.48504 * 110.00309 * 301.32208 * 21 19 18 41 41 H 1.08002 * 120.04471 * 180.02562 * 22 18 17 42 42 H 1.08998 * 113.61542 * 270.88622 * 23 7 6 43 43 H 1.08998 * 113.61766 * 139.98331 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1846 -0.0006 5 1 3.8999 0.4286 -0.6963 6 6 4.2604 2.5353 -0.1235 7 6 5.2680 1.9991 0.9071 8 1 5.5800 2.7426 1.6406 9 7 6.3957 1.2817 0.3072 10 6 7.5683 1.1978 0.9661 11 8 7.6903 1.7171 2.0587 12 6 8.7041 0.4759 0.3616 13 6 9.9271 0.3911 1.0407 14 8 10.0726 0.9731 2.2573 15 6 11.3476 0.8447 2.8896 16 6 10.9869 -0.2940 0.4648 17 6 10.8392 -0.8805 -0.7762 18 6 9.6332 -0.7948 -1.4528 19 6 9.4852 -1.4401 -2.8066 20 8 8.4441 -2.4176 -2.7572 21 14 11.0878 -2.2634 -3.2806 22 6 8.5685 -0.1224 -0.8936 23 6 4.1454 1.0744 1.4068 24 1 -0.3633 0.5139 -0.8899 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3633 0.5138 0.8900 27 1 1.6886 1.8464 -0.8900 28 1 1.6887 1.8463 0.8900 29 1 4.6941 2.7101 -1.1081 30 1 3.6739 3.3800 0.2378 31 1 6.2982 0.8671 -0.5643 32 1 11.5735 -0.2109 3.0411 33 1 12.1137 1.2929 2.2570 34 1 11.3282 1.3536 3.8533 35 1 11.9302 -0.3647 0.9860 36 1 11.6687 -1.4089 -1.2223 37 1 9.2348 -0.6796 -3.5462 38 1 8.6002 -3.1268 -2.1186 39 1 10.9552 -2.9030 -4.6142 40 1 12.1851 -1.2631 -3.3045 41 1 7.6302 -0.0585 -1.4245 42 1 3.5274 1.5198 2.1865 43 1 4.4862 0.0699 1.6576 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535612_12496546.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:53 Heat of formation + Delta-G solvation = -87.707510 kcal Electronic energy + Delta-G solvation = -25573.519930 eV Core-core repulsion = 21780.159832 eV Total energy + Delta-G solvation = -3793.360098 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -41.80416 -40.85448 -39.30373 -39.18417 -38.09533 -37.15537 -34.41774 -32.52906 -31.83480 -29.65662 -28.57803 -27.00403 -26.63929 -26.20998 -25.30110 -23.59193 -22.58566 -21.51616 -20.24186 -19.44851 -18.40522 -18.14247 -17.37774 -17.19239 -16.94851 -16.81170 -16.65641 -16.28230 -16.17028 -15.90571 -15.83714 -15.58726 -15.19299 -14.66618 -14.57555 -14.34615 -14.18144 -13.81270 -13.64497 -13.49306 -13.39635 -13.17813 -12.80392 -12.44318 -12.37622 -12.13880 -12.09963 -11.83350 -11.82222 -11.53122 -11.25777 -10.82901 -10.57045 -10.43235 -10.22763 -9.92096 -9.27033 -5.11183 -0.24714 0.19629 1.22092 1.55074 1.87543 1.91571 2.14269 2.22678 2.72608 2.78205 3.36333 3.45903 3.50952 3.60190 3.60585 3.66847 3.86258 3.95150 3.96611 4.07621 4.20022 4.20427 4.31467 4.34911 4.36150 4.42181 4.47384 4.55385 4.56975 4.58446 4.64155 4.69249 4.73533 4.78831 4.83855 4.90248 5.05439 5.09491 5.11766 5.20849 5.23825 5.49875 5.66718 6.22561 6.29284 6.50806 6.59000 7.37398 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.391 6.391 3 C 0.069 3.931 4 C -0.110 4.110 5 H 0.098 0.902 6 C -0.138 4.138 7 C 0.122 3.878 8 H 0.106 0.894 9 N -0.713 5.713 10 C 0.564 3.436 11 O -0.514 6.514 12 C -0.174 4.174 13 C 0.193 3.807 14 O -0.279 6.279 15 C 0.019 3.981 16 C -0.214 4.214 17 C -0.048 4.048 18 C -0.169 4.169 19 C -0.062 4.062 20 O -0.540 6.540 21 Si 0.686 3.314 22 C -0.019 4.019 23 C -0.143 4.143 24 H 0.041 0.959 25 H 0.086 0.914 26 H 0.041 0.959 27 H 0.050 0.950 28 H 0.052 0.948 29 H 0.077 0.923 30 H 0.098 0.902 31 H 0.399 0.601 32 H 0.059 0.941 33 H 0.058 0.942 34 H 0.105 0.895 35 H 0.141 0.859 36 H 0.134 0.866 37 H 0.115 0.885 38 H 0.380 0.620 39 H -0.253 1.253 40 H -0.258 1.258 41 H 0.135 0.865 42 H 0.091 0.909 43 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.193 -1.647 -0.867 2.211 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.309 6.309 3 C -0.007 4.007 4 C -0.128 4.128 5 H 0.117 0.883 6 C -0.177 4.177 7 C 0.017 3.983 8 H 0.124 0.876 9 N -0.366 5.366 10 C 0.352 3.648 11 O -0.390 6.390 12 C -0.178 4.178 13 C 0.144 3.856 14 O -0.189 6.189 15 C -0.076 4.076 16 C -0.232 4.232 17 C -0.065 4.065 18 C -0.170 4.170 19 C -0.173 4.173 20 O -0.346 6.346 21 Si 0.588 3.412 22 C -0.038 4.038 23 C -0.182 4.182 24 H 0.059 0.941 25 H 0.105 0.895 26 H 0.060 0.940 27 H 0.068 0.932 28 H 0.070 0.930 29 H 0.096 0.904 30 H 0.116 0.884 31 H 0.235 0.765 32 H 0.078 0.922 33 H 0.076 0.924 34 H 0.123 0.877 35 H 0.159 0.841 36 H 0.151 0.849 37 H 0.132 0.868 38 H 0.227 0.773 39 H -0.178 1.178 40 H -0.183 1.183 41 H 0.153 0.847 42 H 0.110 0.890 43 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 1.670 -0.953 -0.965 2.151 hybrid contribution -0.389 0.432 -0.492 0.762 sum 1.281 -0.520 -1.457 2.009 Atomic orbital electron populations 1.22758 0.80887 1.02954 1.00000 1.87896 1.19771 1.27871 1.95405 1.22562 0.93036 0.84878 1.00235 1.22611 0.93121 0.98294 0.98818 0.88339 1.23345 0.97074 0.97151 1.00087 1.21782 0.85206 0.95009 0.96335 0.87575 1.45560 1.11472 1.56969 1.22566 1.17934 0.81995 0.79893 0.84998 1.90844 1.82677 1.45801 1.19635 1.19321 0.93428 1.08103 0.96952 1.19090 0.92364 0.89328 0.84813 1.86383 1.34468 1.69757 1.28324 1.23235 0.83628 1.02272 0.98500 1.21233 0.99394 1.04424 0.98187 1.20996 0.96330 0.95742 0.93471 1.20125 0.94455 1.03869 0.98504 1.24962 1.02466 0.94116 0.95781 1.86501 1.45324 1.38107 1.64645 0.94779 0.75600 0.85948 0.84835 1.20964 0.98540 0.92178 0.92138 1.23484 0.97094 1.01133 0.96465 0.94056 0.89509 0.94022 0.93172 0.93007 0.90410 0.88364 0.76529 0.92243 0.92356 0.87663 0.84118 0.84900 0.86811 0.77260 1.17826 1.18255 0.84699 0.89007 0.90691 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 11.01 101.05 1.11 1.11 16 2 O -0.39 -0.93 10.70 -35.23 -0.38 -1.30 16 3 C 0.07 0.01 5.77 37.16 0.21 0.23 16 4 C -0.11 0.04 3.89 -89.81 -0.35 -0.31 16 5 H 0.10 -0.01 8.14 -51.93 -0.42 -0.43 16 6 C -0.14 0.19 7.39 -25.92 -0.19 0.00 16 7 C 0.12 0.09 4.32 -67.12 -0.29 -0.20 16 8 H 0.11 0.24 7.47 -51.93 -0.39 -0.14 16 9 N -0.71 -0.73 5.21 -54.06 -0.28 -1.01 16 10 C 0.56 2.27 7.76 -12.47 -0.10 2.17 16 11 O -0.51 -4.00 14.76 -16.59 -0.24 -4.24 16 12 C -0.17 -0.42 5.89 -104.84 -0.62 -1.04 16 13 C 0.19 0.48 6.70 -38.69 -0.26 0.22 16 14 O -0.28 -1.02 8.57 -40.54 -0.35 -1.37 16 15 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 16 C -0.21 0.05 9.03 -39.47 -0.36 -0.31 16 17 C -0.05 0.06 8.66 -39.53 -0.34 -0.29 16 18 C -0.17 0.12 5.39 -104.67 -0.56 -0.45 16 19 C -0.06 0.08 2.81 36.01 0.10 0.18 16 20 O -0.54 0.48 12.76 -35.23 -0.45 0.03 16 21 Si 0.69 -1.32 29.77 -169.99 -5.06 -6.38 16 22 C -0.02 0.00 9.08 -39.20 -0.36 -0.36 16 23 C -0.14 -0.08 7.43 -25.92 -0.19 -0.28 16 24 H 0.04 -0.04 8.14 -51.93 -0.42 -0.46 16 25 H 0.09 -0.08 8.14 -51.93 -0.42 -0.50 16 26 H 0.04 -0.04 8.14 -51.93 -0.42 -0.46 16 27 H 0.05 -0.03 8.14 -51.93 -0.42 -0.46 16 28 H 0.05 -0.03 7.84 -51.93 -0.41 -0.43 16 29 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 30 H 0.10 -0.22 8.10 -51.93 -0.42 -0.64 16 31 H 0.40 -0.48 6.73 -40.82 -0.27 -0.75 16 32 H 0.06 -0.14 7.65 -51.93 -0.40 -0.54 16 33 H 0.06 -0.13 7.67 -51.93 -0.40 -0.52 16 34 H 0.11 -0.17 8.14 -51.93 -0.42 -0.60 16 35 H 0.14 -0.35 6.30 -52.49 -0.33 -0.68 16 36 H 0.13 -0.44 4.85 -52.49 -0.25 -0.69 16 37 H 0.11 -0.12 7.96 -51.93 -0.41 -0.53 16 38 H 0.38 -1.69 8.70 45.56 0.40 -1.29 16 39 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 40 H -0.26 -0.08 7.11 56.52 0.40 0.32 16 41 H 0.14 -0.21 6.40 -52.49 -0.34 -0.54 16 42 H 0.09 0.01 7.90 -51.93 -0.41 -0.40 16 43 H 0.07 0.14 8.14 -51.93 -0.42 -0.28 16 LS Contribution 353.65 15.07 5.33 5.33 Total: 0.00 -9.04 353.65 -8.84 -17.88 By element: Atomic # 1 Polarization: -4.36 SS G_CDS: -6.21 Total: -10.58 kcal Atomic # 6 Polarization: 2.84 SS G_CDS: -1.19 Total: 1.65 kcal Atomic # 7 Polarization: -0.73 SS G_CDS: -0.28 Total: -1.01 kcal Atomic # 8 Polarization: -5.47 SS G_CDS: -1.42 Total: -6.89 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.06 Total: -6.38 kcal Total LS contribution 5.33 Total: 5.33 kcal Total: -9.04 -8.84 -17.88 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_12496546.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.823 kcal (2) G-P(sol) polarization free energy of solvation -9.044 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.867 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.841 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.885 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.708 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds