Wall clock time and date at job start Tue Mar 9 2021 13:10:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.42900 * 114.00146 * 2 1 4 4 C 1.52997 * 109.46858 * 179.97438 * 3 2 1 5 5 H 1.09001 * 112.85194 * 43.80477 * 4 3 2 6 6 C 1.53781 * 113.61340 * 174.99951 * 4 3 2 7 7 C 1.53786 * 87.08258 * 140.06647 * 6 4 3 8 8 H 1.08992 * 113.61792 * 219.93548 * 7 6 4 9 9 N 1.46503 * 113.61437 * 89.11321 * 7 6 4 10 10 C 1.34777 * 119.99803 * 156.52917 * 9 7 6 11 11 O 1.21570 * 119.99864 * 0.02562 * 10 9 7 12 12 C 1.47723 * 119.99891 * 180.02562 * 10 9 7 13 13 C 1.39627 * 120.11929 * 179.97438 * 12 10 9 14 14 C 1.37856 * 119.88168 * 180.02562 * 13 12 10 15 15 C 1.50704 * 119.94243 * 180.27264 * 14 13 12 16 16 O 1.42898 * 109.47594 * 254.72863 * 15 14 13 17 17 Si 1.86302 * 109.47088 * 134.72468 * 15 14 13 18 18 C 1.38635 * 120.11820 * 0.02562 * 14 13 12 19 19 F 1.35097 * 119.87990 * 180.02562 * 18 14 13 20 20 C 1.38678 * 120.23843 * 359.97438 * 18 14 13 21 21 C 1.37819 * 120.11758 * 359.97438 * 20 18 14 22 22 C 1.53783 * 87.17145 * 334.52765 * 7 6 4 23 23 H 1.08997 * 109.46714 * 300.00363 * 1 2 3 24 24 H 1.09006 * 109.46762 * 59.99909 * 1 2 3 25 25 H 1.08996 * 109.47164 * 179.97438 * 1 2 3 26 26 H 1.08997 * 109.46611 * 60.00343 * 3 2 1 27 27 H 1.09001 * 109.46954 * 299.99867 * 3 2 1 28 28 H 1.08998 * 113.61299 * 25.52366 * 6 4 3 29 29 H 1.08999 * 113.61998 * 254.61086 * 6 4 3 30 30 H 0.96998 * 119.99688 * 336.53588 * 9 7 6 31 31 H 1.08003 * 120.06122 * 0.03295 * 13 12 10 32 32 H 1.09001 * 109.46793 * 14.72754 * 15 14 13 33 33 H 0.96702 * 113.99458 * 300.00087 * 16 15 14 34 34 H 1.48499 * 109.99745 * 58.68288 * 17 15 14 35 35 H 1.48498 * 109.99784 * 180.02562 * 17 15 14 36 36 H 1.07995 * 119.93872 * 179.97438 * 20 18 14 37 37 H 1.07995 * 120.05705 * 179.97438 * 21 20 18 38 38 H 1.09002 * 113.61500 * 140.02205 * 22 7 6 39 39 H 1.08998 * 113.61640 * 270.92584 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1845 0.0006 5 1 3.9005 0.4283 -0.6944 6 6 4.2606 2.5351 -0.1221 7 6 5.2686 1.9985 0.9079 8 1 5.5822 2.7421 1.6404 9 7 6.3958 1.2811 0.3071 10 6 7.5591 1.1704 0.9787 11 8 7.6728 1.6655 2.0832 12 6 8.6960 0.4475 0.3727 13 6 9.9024 0.3318 1.0660 14 6 10.9603 -0.3434 0.4956 15 6 12.2611 -0.4744 1.2453 16 8 13.2295 0.4095 0.6772 17 14 12.8745 -2.2293 1.1227 18 6 10.8281 -0.9066 -0.7642 19 9 11.8678 -1.5677 -1.3184 20 6 9.6321 -0.7946 -1.4573 21 6 8.5678 -0.1226 -0.8958 22 6 4.1473 1.0737 1.4102 23 1 -0.3632 0.5139 0.8899 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3633 -1.0276 -0.0005 26 1 1.6887 1.8462 0.8900 27 1 1.6887 1.8463 -0.8900 28 1 3.6744 3.3798 0.2398 29 1 4.6939 2.7102 -1.1068 30 1 6.3050 0.8858 -0.5740 31 1 10.0066 0.7704 2.0475 32 1 12.1042 -0.2167 2.2928 33 1 13.4191 0.2381 -0.2554 34 1 13.0618 -2.6033 -0.3022 35 1 14.1564 -2.3717 1.8585 36 1 9.5346 -1.2348 -2.4386 37 1 7.6370 -0.0357 -1.4366 38 1 4.4891 0.0697 1.6616 39 1 3.5301 1.5195 2.1902 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535612_12496548.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:56 Heat of formation + Delta-G solvation = -90.930269 kcal Electronic energy + Delta-G solvation = -23391.961418 eV Core-core repulsion = 19603.227407 eV Total energy + Delta-G solvation = -3788.734012 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.126 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -50.47939 -41.67333 -40.49643 -39.30057 -38.22317 -37.73860 -34.68974 -32.89542 -31.97933 -29.71968 -27.16714 -26.97438 -26.73894 -25.23470 -23.61375 -23.42588 -21.69380 -20.41308 -19.30461 -18.92023 -17.97457 -17.87242 -17.46547 -17.16475 -17.09383 -16.82657 -16.39876 -16.20163 -15.92679 -15.65001 -15.58482 -15.11403 -14.88874 -14.65857 -14.38196 -14.07736 -13.89180 -13.69322 -13.58365 -13.39520 -12.98419 -12.90225 -12.45894 -12.36097 -11.94259 -11.66903 -11.37451 -11.26448 -11.11898 -10.83705 -10.64613 -10.23334 -10.16225 -9.87211 -4.94196 -0.56941 -0.07444 1.21488 1.56557 1.64167 1.92223 2.02282 2.51272 2.69339 2.89722 3.19234 3.33581 3.40876 3.46599 3.49053 3.49404 3.74075 3.78912 3.87113 4.03300 4.22725 4.24998 4.29055 4.35135 4.47536 4.49838 4.51651 4.58266 4.63323 4.67557 4.71084 4.73840 4.77623 4.91773 4.95697 4.98344 5.02790 5.07386 5.45922 5.52516 6.15050 6.28420 6.34630 7.09119 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.391 6.391 3 C 0.069 3.931 4 C -0.110 4.110 5 H 0.098 0.902 6 C -0.138 4.138 7 C 0.120 3.880 8 H 0.107 0.893 9 N -0.708 5.708 10 C 0.565 3.435 11 O -0.527 6.527 12 C -0.143 4.143 13 C -0.009 4.009 14 C -0.151 4.151 15 C -0.074 4.074 16 O -0.523 6.523 17 Si 0.675 3.325 18 C 0.119 3.881 19 F -0.123 7.123 20 C -0.152 4.152 21 C -0.055 4.055 22 C -0.143 4.143 23 H 0.042 0.958 24 H 0.041 0.959 25 H 0.087 0.913 26 H 0.052 0.948 27 H 0.051 0.949 28 H 0.099 0.901 29 H 0.078 0.922 30 H 0.401 0.599 31 H 0.151 0.849 32 H 0.125 0.875 33 H 0.375 0.625 34 H -0.231 1.231 35 H -0.259 1.259 36 H 0.147 0.853 37 H 0.138 0.862 38 H 0.075 0.925 39 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.064 -0.865 -3.114 6.007 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.310 6.310 3 C -0.008 4.008 4 C -0.129 4.129 5 H 0.116 0.884 6 C -0.176 4.176 7 C 0.014 3.986 8 H 0.125 0.875 9 N -0.360 5.360 10 C 0.352 3.648 11 O -0.404 6.404 12 C -0.147 4.147 13 C -0.028 4.028 14 C -0.153 4.153 15 C -0.183 4.183 16 O -0.329 6.329 17 Si 0.574 3.426 18 C 0.100 3.900 19 F -0.101 7.101 20 C -0.171 4.171 21 C -0.074 4.074 22 C -0.181 4.181 23 H 0.060 0.940 24 H 0.060 0.940 25 H 0.105 0.895 26 H 0.070 0.930 27 H 0.069 0.931 28 H 0.118 0.882 29 H 0.097 0.903 30 H 0.237 0.763 31 H 0.169 0.831 32 H 0.143 0.857 33 H 0.223 0.777 34 H -0.154 1.154 35 H -0.184 1.184 36 H 0.165 0.835 37 H 0.156 0.844 38 H 0.094 0.906 39 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -4.197 -0.970 -2.004 4.751 hybrid contribution 0.118 0.695 -1.504 1.660 sum -4.079 -0.275 -3.507 5.387 Atomic orbital electron populations 1.22764 0.80795 1.02999 1.00048 1.87890 1.19848 1.27836 1.95418 1.22557 0.92958 0.84930 1.00316 1.22663 0.93237 0.98215 0.98747 0.88367 1.23337 0.96966 0.97250 1.00014 1.21848 0.85182 0.95072 0.96476 0.87474 1.45559 1.12104 1.57054 1.21299 1.18098 0.82146 0.79505 0.85055 1.90823 1.82766 1.47364 1.19447 1.19979 0.95273 1.03370 0.96050 1.21044 0.89464 0.92447 0.99828 1.20271 0.98702 1.01713 0.94587 1.24998 0.86279 1.06910 1.00107 1.86659 1.60124 1.56041 1.30127 0.95426 0.85999 0.78053 0.83075 1.17909 0.85282 0.94483 0.92357 1.91575 1.55649 1.77718 1.85182 1.21098 0.91817 1.02504 1.01670 1.21181 0.98468 0.94140 0.93567 1.23531 0.96962 1.01094 0.96534 0.93975 0.94027 0.89477 0.92963 0.93116 0.88217 0.90317 0.76347 0.83149 0.85744 0.77704 1.15447 1.18434 0.83533 0.84421 0.90593 0.88865 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 11.01 101.05 1.11 1.08 16 2 O -0.39 -0.49 10.70 -35.23 -0.38 -0.87 16 3 C 0.07 -0.07 5.78 37.16 0.21 0.14 16 4 C -0.11 0.21 3.90 -89.67 -0.35 -0.14 16 5 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 6 C -0.14 0.41 7.38 -25.92 -0.19 0.22 16 7 C 0.12 -0.13 4.30 -67.11 -0.29 -0.42 16 8 H 0.11 0.05 7.50 -51.93 -0.39 -0.34 16 9 N -0.71 0.94 5.21 -53.99 -0.28 0.65 16 10 C 0.56 0.78 7.77 -12.38 -0.10 0.69 16 11 O -0.53 -2.74 15.96 5.30 0.08 -2.65 16 12 C -0.14 0.01 5.87 -104.97 -0.62 -0.60 16 13 C -0.01 0.00 9.21 -39.20 -0.36 -0.37 16 14 C -0.15 -0.01 4.78 -104.61 -0.50 -0.51 16 15 C -0.07 -0.02 2.80 36.01 0.10 0.08 16 16 O -0.52 -1.02 12.88 -35.23 -0.45 -1.47 16 17 Si 0.68 -0.10 30.82 -169.99 -5.24 -5.34 16 18 C 0.12 -0.02 6.62 -39.27 -0.26 -0.28 16 19 F -0.12 -0.10 12.57 2.25 0.03 -0.07 16 20 C -0.15 0.28 10.01 -39.57 -0.40 -0.12 16 21 C -0.05 0.13 9.54 -39.20 -0.37 -0.24 16 22 C -0.14 0.15 7.45 -25.77 -0.19 -0.05 16 23 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 24 H 0.04 -0.07 8.14 -51.93 -0.42 -0.50 16 25 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 26 H 0.05 -0.09 7.85 -51.93 -0.41 -0.49 16 27 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 28 H 0.10 -0.36 8.10 -51.93 -0.42 -0.78 16 29 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 30 H 0.40 -1.58 6.73 -40.82 -0.27 -1.85 16 31 H 0.15 0.09 7.58 -52.48 -0.40 -0.31 16 32 H 0.12 -0.10 7.76 -51.93 -0.40 -0.50 16 33 H 0.38 -0.21 8.39 45.56 0.38 0.17 16 34 H -0.23 -0.38 5.28 56.52 0.30 -0.09 16 35 H -0.26 -0.81 7.11 56.52 0.40 -0.40 16 36 H 0.15 -0.54 8.06 -52.49 -0.42 -0.97 16 37 H 0.14 -0.74 6.40 -52.49 -0.34 -1.07 16 38 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 39 H 0.09 -0.12 7.91 -51.93 -0.41 -0.53 16 LS Contribution 330.22 15.07 4.98 4.98 Total: 0.00 -7.45 330.22 -8.80 -16.25 By element: Atomic # 1 Polarization: -5.62 SS G_CDS: -5.34 Total: -10.96 kcal Atomic # 6 Polarization: 1.68 SS G_CDS: -2.20 Total: -0.51 kcal Atomic # 7 Polarization: 0.94 SS G_CDS: -0.28 Total: 0.65 kcal Atomic # 8 Polarization: -4.25 SS G_CDS: -0.75 Total: -4.99 kcal Atomic # 9 Polarization: -0.10 SS G_CDS: 0.03 Total: -0.07 kcal Atomic # 14 Polarization: -0.10 SS G_CDS: -5.24 Total: -5.34 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -7.45 -8.80 -16.25 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_12496548.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.681 kcal (2) G-P(sol) polarization free energy of solvation -7.451 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.132 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.798 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.249 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.930 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds