Wall clock time and date at job start Tue Mar 9 2021 13:10:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.42900 * 114.00146 * 2 1 4 4 C 1.52997 * 109.46858 * 179.97438 * 3 2 1 5 5 H 1.09001 * 112.85194 * 43.80477 * 4 3 2 6 6 C 1.53781 * 113.61340 * 174.99951 * 4 3 2 7 7 C 1.53786 * 87.08258 * 140.06647 * 6 4 3 8 8 H 1.08992 * 113.61792 * 219.93548 * 7 6 4 9 9 N 1.46503 * 113.61437 * 89.11321 * 7 6 4 10 10 C 1.34777 * 119.99803 * 156.52917 * 9 7 6 11 11 O 1.21570 * 119.99864 * 0.02562 * 10 9 7 12 12 C 1.47723 * 119.99891 * 180.02562 * 10 9 7 13 13 C 1.39627 * 120.11929 * 179.97438 * 12 10 9 14 14 C 1.37856 * 119.88168 * 180.02562 * 13 12 10 15 15 C 1.50704 * 119.94243 * 180.27264 * 14 13 12 16 16 O 1.42898 * 109.47594 * 254.72863 * 15 14 13 17 17 Si 1.86302 * 109.47088 * 134.72468 * 15 14 13 18 18 C 1.38635 * 120.11820 * 0.02562 * 14 13 12 19 19 F 1.35097 * 119.87990 * 180.02562 * 18 14 13 20 20 C 1.38678 * 120.23843 * 359.97438 * 18 14 13 21 21 C 1.37819 * 120.11758 * 359.97438 * 20 18 14 22 22 C 1.53783 * 87.17145 * 334.52765 * 7 6 4 23 23 H 1.08997 * 109.46714 * 300.00363 * 1 2 3 24 24 H 1.09006 * 109.46762 * 59.99909 * 1 2 3 25 25 H 1.08996 * 109.47164 * 179.97438 * 1 2 3 26 26 H 1.08997 * 109.46611 * 60.00343 * 3 2 1 27 27 H 1.09001 * 109.46954 * 299.99867 * 3 2 1 28 28 H 1.08998 * 113.61299 * 25.52366 * 6 4 3 29 29 H 1.08999 * 113.61998 * 254.61086 * 6 4 3 30 30 H 0.96998 * 119.99688 * 336.53588 * 9 7 6 31 31 H 1.08003 * 120.06122 * 0.03295 * 13 12 10 32 32 H 1.09001 * 109.46793 * 14.72754 * 15 14 13 33 33 H 0.96702 * 113.99458 * 300.00087 * 16 15 14 34 34 H 1.48499 * 109.99745 * 58.68288 * 17 15 14 35 35 H 1.48498 * 109.99784 * 180.02562 * 17 15 14 36 36 H 1.07995 * 119.93872 * 179.97438 * 20 18 14 37 37 H 1.07995 * 120.05705 * 179.97438 * 21 20 18 38 38 H 1.09002 * 113.61500 * 140.02205 * 22 7 6 39 39 H 1.08998 * 113.61640 * 270.92584 * 22 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5355 1.1845 0.0006 5 1 3.9005 0.4283 -0.6944 6 6 4.2606 2.5351 -0.1221 7 6 5.2686 1.9985 0.9079 8 1 5.5822 2.7421 1.6404 9 7 6.3958 1.2811 0.3071 10 6 7.5591 1.1704 0.9787 11 8 7.6728 1.6655 2.0832 12 6 8.6960 0.4475 0.3727 13 6 9.9024 0.3318 1.0660 14 6 10.9603 -0.3434 0.4956 15 6 12.2611 -0.4744 1.2453 16 8 13.2295 0.4095 0.6772 17 14 12.8745 -2.2293 1.1227 18 6 10.8281 -0.9066 -0.7642 19 9 11.8678 -1.5677 -1.3184 20 6 9.6321 -0.7946 -1.4573 21 6 8.5678 -0.1226 -0.8958 22 6 4.1473 1.0737 1.4102 23 1 -0.3632 0.5139 0.8899 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3633 -1.0276 -0.0005 26 1 1.6887 1.8462 0.8900 27 1 1.6887 1.8463 -0.8900 28 1 3.6744 3.3798 0.2398 29 1 4.6939 2.7102 -1.1068 30 1 6.3050 0.8858 -0.5740 31 1 10.0066 0.7704 2.0475 32 1 12.1042 -0.2167 2.2928 33 1 13.4191 0.2381 -0.2554 34 1 13.0618 -2.6033 -0.3022 35 1 14.1564 -2.3717 1.8585 36 1 9.5346 -1.2348 -2.4386 37 1 7.6370 -0.0357 -1.4366 38 1 4.4891 0.0697 1.6616 39 1 3.5301 1.5195 2.1902 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16535612_12496548.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:55 Heat of formation + Delta-G solvation = -89.978544 kcal Electronic energy + Delta-G solvation = -23391.920148 eV Core-core repulsion = 19603.227407 eV Total energy + Delta-G solvation = -3788.692742 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.126 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -50.47861 -41.66460 -40.41630 -39.33252 -38.19486 -37.80007 -34.71891 -32.84607 -31.92564 -29.61722 -27.11029 -26.91169 -26.61054 -25.20533 -23.54710 -23.34569 -21.69206 -20.33077 -19.28861 -18.89349 -17.98306 -17.89214 -17.37994 -17.15566 -17.05933 -16.76448 -16.34455 -16.20509 -15.98253 -15.66742 -15.55920 -15.04526 -14.84152 -14.63666 -14.28883 -14.02935 -13.89401 -13.70599 -13.46195 -13.35054 -12.97542 -12.79960 -12.37241 -12.35879 -11.80488 -11.56853 -11.36485 -11.26411 -11.22866 -10.87824 -10.56908 -10.22564 -10.12332 -9.82543 -4.97218 -0.53271 0.01063 1.19042 1.54410 1.58101 1.91773 1.99176 2.53850 2.82062 2.95742 3.22499 3.43817 3.47619 3.52950 3.59365 3.63625 3.85207 3.94133 4.00772 4.10125 4.30940 4.37572 4.42196 4.49558 4.61059 4.62271 4.65422 4.72492 4.76010 4.78735 4.84741 4.87210 4.88840 4.98708 5.04453 5.07662 5.12562 5.18739 5.54895 5.60397 6.25686 6.30299 6.41823 7.09169 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.416 6.416 3 C 0.064 3.936 4 C -0.104 4.104 5 H 0.102 0.898 6 C -0.122 4.122 7 C 0.113 3.887 8 H 0.088 0.912 9 N -0.693 5.693 10 C 0.562 3.438 11 O -0.575 6.575 12 C -0.152 4.152 13 C -0.021 4.021 14 C -0.155 4.155 15 C -0.083 4.083 16 O -0.543 6.543 17 Si 0.750 3.250 18 C 0.110 3.890 19 F -0.130 7.130 20 C -0.146 4.146 21 C -0.040 4.040 22 C -0.145 4.145 23 H 0.046 0.954 24 H 0.050 0.950 25 H 0.090 0.910 26 H 0.055 0.945 27 H 0.061 0.939 28 H 0.108 0.892 29 H 0.093 0.907 30 H 0.416 0.584 31 H 0.140 0.860 32 H 0.130 0.870 33 H 0.384 0.616 34 H -0.252 1.252 35 H -0.306 1.306 36 H 0.172 0.828 37 H 0.173 0.827 38 H 0.061 0.939 39 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.351 -0.939 -4.908 8.082 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.336 6.336 3 C -0.012 4.012 4 C -0.122 4.122 5 H 0.120 0.880 6 C -0.159 4.159 7 C 0.007 3.993 8 H 0.106 0.894 9 N -0.345 5.345 10 C 0.351 3.649 11 O -0.456 6.456 12 C -0.156 4.156 13 C -0.040 4.040 14 C -0.156 4.156 15 C -0.192 4.192 16 O -0.351 6.351 17 Si 0.653 3.347 18 C 0.090 3.910 19 F -0.108 7.108 20 C -0.165 4.165 21 C -0.058 4.058 22 C -0.184 4.184 23 H 0.065 0.935 24 H 0.068 0.932 25 H 0.109 0.891 26 H 0.073 0.927 27 H 0.079 0.921 28 H 0.127 0.873 29 H 0.112 0.888 30 H 0.254 0.746 31 H 0.158 0.842 32 H 0.148 0.852 33 H 0.233 0.767 34 H -0.177 1.177 35 H -0.235 1.235 36 H 0.190 0.810 37 H 0.190 0.810 38 H 0.079 0.921 39 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -5.528 -1.047 -3.841 6.812 hybrid contribution 0.508 0.720 -0.947 1.293 sum -5.020 -0.327 -4.787 6.944 Atomic orbital electron populations 1.22874 0.79978 1.03510 1.00697 1.87850 1.20953 1.29204 1.95582 1.22686 0.93253 0.84295 1.00964 1.22631 0.92890 0.98913 0.97800 0.87999 1.23280 0.95729 0.96908 1.00025 1.21878 0.85330 0.94907 0.97168 0.89427 1.45453 1.11232 1.56214 1.21594 1.18366 0.82992 0.79028 0.84561 1.90798 1.83631 1.49566 1.21562 1.19959 0.94497 1.04018 0.97098 1.21020 0.90167 0.93022 0.99793 1.20146 0.98261 1.02253 0.94962 1.25173 0.86421 1.07024 1.00554 1.86623 1.60649 1.56828 1.31004 0.94606 0.83209 0.76781 0.80080 1.18111 0.85816 0.94677 0.92393 1.91554 1.56147 1.77921 1.85217 1.21402 0.90878 1.01787 1.02399 1.21502 0.99639 0.92326 0.92371 1.23535 0.97194 1.00200 0.97440 0.93507 0.93179 0.89148 0.92662 0.92082 0.87323 0.88807 0.74563 0.84238 0.85242 0.76727 1.17679 1.23477 0.81045 0.80964 0.92057 0.88914 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 11.01 113.37 1.25 1.19 16 2 O -0.42 -0.87 10.70 -148.98 -1.59 -2.46 16 3 C 0.06 -0.19 5.78 71.98 0.42 0.22 16 4 C -0.10 0.51 3.90 -10.18 -0.04 0.47 16 5 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 6 C -0.12 0.89 7.38 31.12 0.23 1.12 16 7 C 0.11 -0.24 4.30 45.52 0.20 -0.05 16 8 H 0.09 0.20 7.50 -2.39 -0.02 0.18 16 9 N -0.69 2.18 5.21 -443.01 -2.31 -0.13 16 10 C 0.56 1.89 7.77 86.75 0.67 2.56 16 11 O -0.58 -7.12 15.96 -3.94 -0.06 -7.18 16 12 C -0.15 0.04 5.87 -20.09 -0.12 -0.08 16 13 C -0.02 -0.04 9.21 22.51 0.21 0.17 16 14 C -0.15 -0.11 4.78 -19.86 -0.09 -0.21 16 15 C -0.08 -0.13 2.80 71.24 0.20 0.07 16 16 O -0.54 -2.75 12.88 -148.98 -1.92 -4.66 16 17 Si 0.75 0.52 30.82 68.60 2.11 2.64 16 18 C 0.11 -0.10 6.62 22.47 0.15 0.05 16 19 F -0.13 -0.18 12.57 44.97 0.57 0.38 16 20 C -0.15 0.82 10.01 22.28 0.22 1.04 16 21 C -0.04 0.27 9.54 22.52 0.21 0.48 16 22 C -0.15 0.25 7.45 31.21 0.23 0.49 16 23 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 24 H 0.05 -0.22 8.14 -2.38 -0.02 -0.24 16 25 H 0.09 -0.33 8.14 -2.39 -0.02 -0.34 16 26 H 0.06 -0.21 7.85 -2.39 -0.02 -0.23 16 27 H 0.06 -0.31 8.14 -2.39 -0.02 -0.33 16 28 H 0.11 -0.94 8.10 -2.39 -0.02 -0.96 16 29 H 0.09 -0.92 8.14 -2.39 -0.02 -0.94 16 30 H 0.42 -4.06 6.73 -92.71 -0.62 -4.69 16 31 H 0.14 0.51 7.58 -2.91 -0.02 0.48 16 32 H 0.13 -0.01 7.76 -2.39 -0.02 -0.02 16 33 H 0.38 -0.04 8.39 -74.06 -0.62 -0.66 16 34 H -0.25 -0.99 5.28 99.48 0.52 -0.46 16 35 H -0.31 -2.58 7.11 99.48 0.71 -1.87 16 36 H 0.17 -1.80 8.06 -2.91 -0.02 -1.83 16 37 H 0.17 -2.44 6.40 -2.91 -0.02 -2.46 16 38 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 39 H 0.09 -0.17 7.91 -2.39 -0.02 -0.19 16 Total: 0.00 -19.38 330.22 0.22 -19.16 By element: Atomic # 1 Polarization: -14.96 SS G_CDS: -0.31 Total: -15.26 kcal Atomic # 6 Polarization: 3.78 SS G_CDS: 3.74 Total: 7.52 kcal Atomic # 7 Polarization: 2.18 SS G_CDS: -2.31 Total: -0.13 kcal Atomic # 8 Polarization: -10.73 SS G_CDS: -3.58 Total: -14.30 kcal Atomic # 9 Polarization: -0.18 SS G_CDS: 0.57 Total: 0.38 kcal Atomic # 14 Polarization: 0.52 SS G_CDS: 2.11 Total: 2.64 kcal Total: -19.38 0.22 -19.16 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_12496548.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.818 kcal (2) G-P(sol) polarization free energy of solvation -19.383 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.201 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.223 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.160 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.979 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds