Wall clock time and date at job start Tue Mar 9 2021 13:11:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42898 * 114.00132 * 2 1 4 4 C 1.52998 * 109.47474 * 180.02562 * 3 2 1 5 5 H 1.08996 * 112.90574 * 43.74975 * 4 3 2 6 6 C 1.53777 * 113.61660 * 175.00200 * 4 3 2 7 7 C 1.53785 * 87.08389 * 139.97959 * 6 4 3 8 8 H 1.08997 * 113.61549 * 219.93868 * 7 6 4 9 9 N 1.46496 * 113.61213 * 89.11449 * 7 6 4 10 10 C 1.34779 * 120.00153 * 155.00320 * 9 7 6 11 11 O 1.21626 * 119.99289 * 0.02562 * 10 9 7 12 12 C 1.47284 * 120.00453 * 179.97438 * 10 9 7 13 13 C 1.40368 * 120.04901 * 179.97438 * 12 10 9 14 14 O 1.35679 * 120.13530 * 0.04411 * 13 12 10 15 15 C 1.38317 * 119.72790 * 180.02562 * 13 12 10 16 16 C 1.39565 * 119.81288 * 359.97438 * 15 13 12 17 17 C 1.47570 * 119.95598 * 180.02562 * 16 15 13 18 18 C 1.36115 * 125.94235 * 180.02562 * 17 16 15 19 19 C 1.40797 * 106.72767 * 179.97438 * 18 17 16 20 20 C 1.34828 * 107.05339 * 0.02562 * 19 18 17 21 21 C 1.50705 * 125.65415 * 179.97438 * 20 19 18 22 22 O 1.42897 * 109.46859 * 65.01093 * 21 20 19 23 23 Si 1.86296 * 109.47158 * 185.01393 * 21 20 19 24 24 O 1.34228 * 108.69468 * 359.97438 * 20 19 18 25 25 C 1.39962 * 120.09136 * 0.27655 * 16 15 13 26 26 C 1.36395 * 120.27693 * 359.44638 * 25 16 15 27 27 C 1.53784 * 87.07821 * 334.56705 * 7 6 4 28 28 H 1.08998 * 109.47052 * 60.00052 * 1 2 3 29 29 H 1.08997 * 109.46832 * 179.97438 * 1 2 3 30 30 H 1.08996 * 109.47027 * 300.00149 * 1 2 3 31 31 H 1.09000 * 109.47215 * 59.99829 * 3 2 1 32 32 H 1.09006 * 109.47469 * 300.00103 * 3 2 1 33 33 H 1.09000 * 113.61642 * 25.43141 * 6 4 3 34 34 H 1.09002 * 113.61567 * 254.53106 * 6 4 3 35 35 H 0.96999 * 120.00394 * 334.99790 * 9 7 6 36 36 H 0.96699 * 113.99980 * 269.97587 * 14 13 12 37 37 H 1.08002 * 120.09547 * 179.97438 * 15 13 12 38 38 H 1.07994 * 126.63208 * 359.73553 * 18 17 16 39 39 H 1.08003 * 126.47242 * 179.97438 * 19 18 17 40 40 H 1.08997 * 109.46928 * 305.01679 * 21 20 19 41 41 H 0.96706 * 113.99791 * 60.00933 * 22 21 20 42 42 H 1.48498 * 109.99973 * 179.97438 * 23 21 20 43 43 H 1.48497 * 110.00121 * 301.31852 * 23 21 20 44 44 H 1.07998 * 119.86403 * 179.72504 * 25 16 15 45 45 H 1.07997 * 119.91262 * 180.27922 * 26 25 16 46 46 H 1.09001 * 113.61437 * 139.97689 * 27 7 6 47 47 H 1.08998 * 113.61654 * 270.88125 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 3.5354 1.1847 -0.0006 5 1 3.9008 0.4283 -0.6952 6 6 4.2603 2.5353 -0.1234 7 6 5.2679 1.9992 0.9072 8 1 5.5809 2.7432 1.6397 9 7 6.3955 1.2819 0.3072 10 6 7.5683 1.1980 0.9662 11 8 7.6901 1.7175 2.0591 12 6 8.7019 0.4764 0.3633 13 6 9.9238 0.3889 1.0484 14 8 10.0641 0.9675 2.2676 15 6 10.9842 -0.2900 0.4758 16 6 10.8322 -0.8835 -0.7782 17 6 11.9612 -1.6090 -1.3918 18 6 11.9481 -2.2300 -2.6030 19 6 13.2281 -2.7872 -2.7865 20 6 13.9524 -2.4834 -1.6907 21 6 15.3868 -2.8775 -1.4487 22 8 16.2261 -2.2337 -2.4094 23 14 15.8931 -2.3564 0.2667 24 8 13.1843 -1.7718 -0.8509 25 6 9.6119 -0.7870 -1.4569 26 6 8.5621 -0.1233 -0.8932 27 6 4.1452 1.0746 1.4068 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8899 31 1 1.6886 1.8464 0.8900 32 1 1.6886 1.8464 -0.8900 33 1 3.6738 3.3801 0.2379 34 1 4.6940 2.7102 -1.1080 35 1 6.2982 0.8672 -0.5642 36 1 10.3750 1.8826 2.2352 37 1 11.9272 -0.3606 0.9976 38 1 11.1157 -2.2878 -3.2885 39 1 13.5656 -3.3521 -3.6429 40 1 15.4876 -3.9586 -1.5447 41 1 16.1870 -1.2678 -2.3813 42 1 17.3055 -2.7399 0.5179 43 1 15.7298 -0.8884 0.4205 44 1 9.4997 -1.2439 -2.4290 45 1 7.6218 -0.0563 -1.4202 46 1 4.4861 0.0700 1.6576 47 1 3.5273 1.5199 2.1865 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535612_12807986.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:06 Heat of formation + Delta-G solvation = -74.548020 kcal Electronic energy + Delta-G solvation = -30933.868126 eV Core-core repulsion = 26437.718053 eV Total energy + Delta-G solvation = -4496.150073 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -43.75911 -41.71551 -40.65132 -39.19297 -38.25198 -38.11073 -37.81100 -34.67619 -34.18864 -33.21141 -31.34115 -30.60079 -29.62392 -27.27960 -26.89753 -26.63194 -24.69324 -24.12570 -23.51400 -22.49025 -22.08496 -21.39427 -20.34246 -19.68821 -18.86453 -18.58301 -17.73355 -17.49913 -17.43388 -17.23806 -16.92162 -16.70255 -16.54206 -16.23980 -16.05150 -15.90828 -15.82195 -15.37230 -15.18949 -14.69911 -14.39645 -14.34791 -14.17132 -14.02636 -13.83221 -13.79355 -13.61670 -13.56402 -13.48653 -12.96485 -12.89473 -12.75507 -12.43194 -12.07210 -11.91323 -11.84546 -11.61038 -11.33335 -11.15263 -10.85955 -10.79431 -10.64028 -10.62211 -10.06877 -9.97236 -9.03896 -5.00726 -0.80270 0.09449 0.63758 1.08697 1.41194 1.43543 1.68178 1.89563 1.96170 2.02314 2.62040 2.71753 2.99688 3.12216 3.31520 3.38162 3.51711 3.52596 3.61571 3.79412 3.82542 3.87720 3.89695 3.92596 4.14112 4.25485 4.29040 4.30423 4.36100 4.37101 4.49752 4.52000 4.55057 4.61307 4.64856 4.66862 4.71783 4.75112 4.77224 4.83539 4.97276 5.01173 5.03097 5.07321 5.11626 5.16321 5.36091 5.44038 5.55949 5.92825 6.17258 6.19779 6.44033 6.67681 7.21505 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.391 6.391 3 C 0.069 3.931 4 C -0.110 4.110 5 H 0.098 0.902 6 C -0.138 4.138 7 C 0.121 3.879 8 H 0.107 0.893 9 N -0.711 5.711 10 C 0.562 3.438 11 O -0.516 6.516 12 C -0.165 4.165 13 C 0.179 3.821 14 O -0.474 6.474 15 C -0.141 4.141 16 C 0.030 3.970 17 C 0.023 3.977 18 C -0.177 4.177 19 C -0.173 4.173 20 C -0.044 4.044 21 C -0.035 4.035 22 O -0.520 6.520 23 Si 0.698 3.302 24 O -0.162 6.162 25 C -0.116 4.116 26 C -0.064 4.064 27 C -0.143 4.143 28 H 0.041 0.959 29 H 0.087 0.913 30 H 0.042 0.958 31 H 0.052 0.948 32 H 0.050 0.950 33 H 0.099 0.901 34 H 0.078 0.922 35 H 0.399 0.601 36 H 0.399 0.601 37 H 0.144 0.856 38 H 0.156 0.844 39 H 0.156 0.844 40 H 0.138 0.862 41 H 0.380 0.620 42 H -0.247 1.247 43 H -0.255 1.255 44 H 0.139 0.861 45 H 0.136 0.864 46 H 0.075 0.925 47 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.888 0.468 -3.827 4.818 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.310 6.310 3 C -0.007 4.007 4 C -0.129 4.129 5 H 0.116 0.884 6 C -0.176 4.176 7 C 0.015 3.985 8 H 0.125 0.875 9 N -0.364 5.364 10 C 0.349 3.651 11 O -0.391 6.391 12 C -0.169 4.169 13 C 0.133 3.867 14 O -0.285 6.285 15 C -0.159 4.159 16 C 0.030 3.970 17 C -0.026 4.026 18 C -0.196 4.196 19 C -0.192 4.192 20 C -0.094 4.094 21 C -0.144 4.144 22 O -0.327 6.327 23 Si 0.597 3.403 24 O -0.059 6.059 25 C -0.134 4.134 26 C -0.083 4.083 27 C -0.182 4.182 28 H 0.060 0.940 29 H 0.105 0.895 30 H 0.060 0.940 31 H 0.070 0.930 32 H 0.069 0.931 33 H 0.117 0.883 34 H 0.096 0.904 35 H 0.235 0.765 36 H 0.257 0.743 37 H 0.162 0.838 38 H 0.174 0.826 39 H 0.173 0.827 40 H 0.156 0.844 41 H 0.229 0.771 42 H -0.172 1.172 43 H -0.179 1.179 44 H 0.157 0.843 45 H 0.154 0.846 46 H 0.093 0.907 47 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -2.092 0.159 -2.189 3.032 hybrid contribution -0.183 1.091 -1.781 2.096 sum -2.275 1.249 -3.970 4.743 Atomic orbital electron populations 1.22761 0.80813 1.02993 1.00037 1.87891 1.19840 1.27861 1.95413 1.22560 0.92976 0.84905 1.00287 1.22613 0.93209 0.98258 0.98790 0.88379 1.23345 0.97023 0.97186 1.00038 1.21814 0.85200 0.95044 0.96396 0.87498 1.45575 1.11501 1.56763 1.22514 1.17961 0.82165 0.79983 0.84976 1.90848 1.82840 1.45967 1.19469 1.20471 0.95457 1.04654 0.96295 1.18280 0.90520 0.93693 0.84252 1.84779 1.89060 1.31727 1.22936 1.21590 0.99656 0.99912 0.94755 1.17755 0.90297 0.95525 0.93433 1.20326 0.84344 1.03923 0.94041 1.21915 0.99111 1.01667 0.96928 1.21584 0.93373 1.04422 0.99827 1.22939 0.95253 0.99823 0.91378 1.24356 0.82658 1.02076 1.05319 1.86669 1.64472 1.24588 1.56983 0.94394 0.83719 0.83719 0.78445 1.83946 1.20756 1.57902 1.43274 1.20704 0.91183 1.00679 1.00832 1.20818 0.98939 0.95197 0.93310 1.23490 0.97048 1.01147 0.96526 0.94030 0.89482 0.93983 0.92972 0.93141 0.88294 0.90360 0.76490 0.74263 0.83828 0.82606 0.82668 0.84405 0.77116 1.17160 1.17930 0.84329 0.84621 0.90660 0.88919 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.09 16 2 O -0.39 -0.67 10.70 -35.23 -0.38 -1.05 16 3 C 0.07 -0.04 5.77 37.16 0.21 0.17 16 4 C -0.11 0.15 3.89 -89.81 -0.35 -0.20 16 5 H 0.10 -0.13 8.14 -51.93 -0.42 -0.55 16 6 C -0.14 0.34 7.39 -25.92 -0.19 0.15 16 7 C 0.12 -0.05 4.32 -67.12 -0.29 -0.34 16 8 H 0.11 0.12 7.46 -51.93 -0.39 -0.27 16 9 N -0.71 0.34 5.21 -54.13 -0.28 0.06 16 10 C 0.56 1.36 7.75 -12.58 -0.10 1.26 16 11 O -0.52 -3.12 14.74 -16.70 -0.25 -3.36 16 12 C -0.17 -0.18 5.89 -104.79 -0.62 -0.79 16 13 C 0.18 0.33 6.71 -38.75 -0.26 0.07 16 14 O -0.47 -1.23 11.56 -40.70 -0.47 -1.70 16 15 C -0.14 -0.14 9.65 -39.06 -0.38 -0.51 16 16 C 0.03 0.01 5.87 -104.95 -0.62 -0.61 16 17 C 0.02 0.02 7.02 -36.54 -0.26 -0.23 16 18 C -0.18 0.00 10.26 -39.38 -0.40 -0.40 16 19 C -0.17 -0.06 10.78 -39.82 -0.43 -0.49 16 20 C -0.04 -0.02 6.21 -35.52 -0.22 -0.24 16 21 C -0.03 0.02 2.98 36.01 0.11 0.13 16 22 O -0.52 -0.20 12.88 -35.23 -0.45 -0.65 16 23 Si 0.70 -0.58 32.11 -169.99 -5.46 -6.03 16 24 O -0.16 -0.22 8.79 4.75 0.04 -0.18 16 25 C -0.12 0.17 9.48 -39.60 -0.38 -0.21 16 26 C -0.06 0.10 9.47 -39.61 -0.38 -0.27 16 27 C -0.14 0.04 7.43 -25.92 -0.19 -0.16 16 28 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 29 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.05 -0.06 7.84 -51.93 -0.41 -0.47 16 32 H 0.05 -0.07 8.14 -51.93 -0.42 -0.50 16 33 H 0.10 -0.32 8.10 -51.93 -0.42 -0.74 16 34 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 35 H 0.40 -1.22 6.71 -40.82 -0.27 -1.50 16 36 H 0.40 -0.48 9.06 45.56 0.41 -0.06 16 37 H 0.14 0.05 7.90 -52.49 -0.41 -0.36 16 38 H 0.16 -0.37 7.24 -52.49 -0.38 -0.75 16 39 H 0.16 -0.13 8.06 -52.48 -0.42 -0.55 16 40 H 0.14 -0.31 7.96 -51.93 -0.41 -0.72 16 41 H 0.38 -0.88 8.70 45.56 0.40 -0.48 16 42 H -0.25 -0.41 7.11 56.52 0.40 0.00 16 43 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 44 H 0.14 -0.52 6.95 -52.49 -0.37 -0.88 16 45 H 0.14 -0.62 6.38 -52.49 -0.33 -0.96 16 46 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 47 H 0.09 -0.05 7.90 -51.93 -0.41 -0.46 16 LS Contribution 399.34 15.07 6.02 6.02 Total: 0.00 -9.87 399.34 -10.42 -20.29 By element: Atomic # 1 Polarization: -6.24 SS G_CDS: -5.58 Total: -11.82 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: -3.62 Total: -1.58 kcal Atomic # 7 Polarization: 0.34 SS G_CDS: -0.28 Total: 0.06 kcal Atomic # 8 Polarization: -5.43 SS G_CDS: -1.51 Total: -6.94 kcal Atomic # 14 Polarization: -0.58 SS G_CDS: -5.46 Total: -6.03 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -9.87 -10.42 -20.29 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_12807986.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.255 kcal (2) G-P(sol) polarization free energy of solvation -9.871 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.125 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.423 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.293 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.548 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds