Wall clock time and date at job start Tue Mar 9 2021 13:11:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42904 * 114.00117 * 2 1 4 4 C 1.52993 * 109.46816 * 180.02562 * 3 2 1 5 5 H 1.09002 * 112.90756 * 316.24247 * 4 3 2 6 6 C 1.54048 * 113.62333 * 87.50301 * 4 3 2 7 7 C 1.53784 * 86.98535 * 139.97577 * 6 4 3 8 8 H 1.08996 * 113.61420 * 219.97931 * 7 6 4 9 9 N 1.46507 * 113.61363 * 89.16437 * 7 6 4 10 10 C 1.34769 * 119.99935 * 105.86041 * 9 7 6 11 11 O 1.21583 * 120.00270 * 0.02562 * 10 9 7 12 12 C 1.47602 * 119.99715 * 179.97438 * 10 9 7 13 13 C 1.39709 * 120.09176 * 0.02763 * 12 10 9 14 14 C 1.37719 * 119.91548 * 179.97438 * 13 12 10 15 15 C 1.50706 * 119.95747 * 179.97438 * 14 13 12 16 16 C 1.38979 * 120.08714 * 359.72799 * 14 13 12 17 17 O 1.35705 * 119.91247 * 180.29470 * 16 14 13 18 18 C 1.39017 * 120.17572 * 0.54468 * 16 14 13 19 19 C 1.50699 * 119.95734 * 179.72581 * 18 16 14 20 20 O 1.42907 * 109.46603 * 74.73147 * 19 18 16 21 21 Si 1.86298 * 109.47032 * 194.72450 * 19 18 16 22 22 C 1.37687 * 120.08606 * 359.45170 * 18 16 14 23 23 C 1.53776 * 87.17509 * 334.57187 * 7 6 4 24 24 H 1.09001 * 109.47366 * 300.00804 * 1 2 3 25 25 H 1.09000 * 109.46875 * 60.00205 * 1 2 3 26 26 H 1.08991 * 109.47444 * 180.02562 * 1 2 3 27 27 H 1.08994 * 109.47082 * 59.99262 * 3 2 1 28 28 H 1.09000 * 109.46873 * 299.99896 * 3 2 1 29 29 H 1.08998 * 113.60919 * 25.47227 * 6 4 3 30 30 H 1.08995 * 113.69579 * 254.48947 * 6 4 3 31 31 H 0.96995 * 119.99639 * 285.86320 * 9 7 6 32 32 H 1.08005 * 120.04061 * 359.97438 * 13 12 10 33 33 H 1.08999 * 109.46932 * 89.99845 * 15 14 13 34 34 H 1.08998 * 109.46791 * 210.00106 * 15 14 13 35 35 H 1.09002 * 109.46894 * 329.99957 * 15 14 13 36 36 H 0.96699 * 114.00327 * 270.24831 * 17 16 14 37 37 H 1.08996 * 109.47117 * 314.73060 * 19 18 16 38 38 H 0.96697 * 114.00527 * 59.99993 * 20 19 18 39 39 H 1.48506 * 109.99834 * 58.68765 * 21 19 18 40 40 H 1.48502 * 110.00011 * 180.02562 * 21 19 18 41 41 H 1.07998 * 120.04261 * 180.24746 * 22 18 16 42 42 H 1.08997 * 113.61942 * 140.02206 * 23 7 6 43 43 H 1.09000 * 113.61528 * 270.92483 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 3.5354 1.1846 -0.0006 5 1 3.9014 0.4280 0.6935 6 6 4.1454 1.0747 -1.4110 7 6 5.2672 1.9993 -0.9095 8 1 5.5798 2.7436 -1.6419 9 7 6.3954 1.2817 -0.3106 10 6 7.5577 1.1716 -0.9837 11 8 7.6703 1.6682 -2.0878 12 6 8.6945 0.4491 -0.3801 13 6 8.5675 -0.1218 0.8887 14 6 9.6303 -0.7955 1.4482 15 6 9.4945 -1.4113 2.8170 16 6 10.8263 -0.9128 0.7501 17 8 11.8693 -1.5827 1.3023 18 6 10.9587 -0.3414 -0.5102 19 6 12.2598 -0.4662 -1.2603 20 8 12.3888 -1.7943 -1.7721 21 14 12.2814 0.7484 -2.6727 22 6 9.9007 0.3338 -1.0765 23 6 4.2605 2.5352 0.1221 24 1 -0.3634 0.5140 0.8899 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3634 -1.0276 0.0005 27 1 1.6886 1.8464 0.8899 28 1 1.6887 1.8464 -0.8900 29 1 3.5272 1.5211 -2.1899 30 1 4.4871 0.0710 -1.6635 31 1 6.3057 0.8859 0.5704 32 1 7.6369 -0.0348 1.4300 33 1 9.1315 -2.4345 2.7207 34 1 10.4658 -1.4152 3.3116 35 1 8.7878 -0.8292 3.4087 36 1 12.4572 -1.0272 1.8323 37 1 13.0896 -0.2544 -0.5860 38 1 11.6828 -2.0516 -2.3807 39 1 12.1159 2.1309 -2.1562 40 1 13.5592 0.6348 -3.4207 41 1 10.0030 0.7740 -2.0574 42 1 4.6949 2.7097 1.1064 43 1 3.6738 3.3801 -0.2385 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535612_13287732.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:35 Heat of formation + Delta-G solvation = -102.080099 kcal Electronic energy + Delta-G solvation = -25362.239117 eV Core-core repulsion = 21568.255777 eV Total energy + Delta-G solvation = -3793.983340 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -41.83430 -40.99926 -39.63051 -38.25650 -37.81170 -37.45317 -34.62710 -33.99093 -31.80690 -29.68076 -28.12208 -27.13550 -26.85645 -26.69442 -25.04117 -23.42333 -22.12044 -21.62537 -20.36599 -19.59698 -18.81433 -18.08225 -17.45423 -17.27708 -16.98479 -16.86621 -16.59500 -16.29738 -15.99759 -15.88088 -15.55401 -15.40080 -14.82248 -14.73857 -14.42631 -14.28103 -14.14046 -13.94927 -13.82488 -13.55192 -13.36265 -13.07053 -12.98751 -12.75806 -12.44476 -12.31100 -11.99725 -11.92716 -11.67097 -11.62909 -11.35121 -10.99234 -10.63454 -10.40129 -10.15248 -10.01234 -9.69258 -4.97676 -0.41091 0.03526 1.27301 1.62899 1.68908 1.97660 1.98068 2.56096 2.70604 3.01447 3.33093 3.36784 3.50270 3.50840 3.53854 3.68529 3.76556 3.85902 3.93260 4.13789 4.23445 4.24152 4.29766 4.36063 4.39945 4.48626 4.49912 4.51185 4.58931 4.59817 4.61210 4.65097 4.73180 4.75348 4.95658 4.97849 5.00261 5.03932 5.06308 5.09901 5.23575 5.46422 5.53979 6.16213 6.38939 6.52254 6.59794 7.13575 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.391 6.391 3 C 0.069 3.931 4 C -0.110 4.110 5 H 0.098 0.902 6 C -0.143 4.143 7 C 0.120 3.880 8 H 0.107 0.893 9 N -0.709 5.709 10 C 0.564 3.436 11 O -0.529 6.529 12 C -0.138 4.138 13 C -0.066 4.066 14 C -0.117 4.117 15 C -0.110 4.110 16 C 0.160 3.840 17 O -0.482 6.482 18 C -0.152 4.152 19 C -0.055 4.055 20 O -0.531 6.531 21 Si 0.677 3.323 22 C -0.044 4.044 23 C -0.138 4.138 24 H 0.041 0.959 25 H 0.042 0.958 26 H 0.087 0.913 27 H 0.050 0.950 28 H 0.052 0.948 29 H 0.093 0.907 30 H 0.075 0.925 31 H 0.401 0.599 32 H 0.132 0.868 33 H 0.077 0.923 34 H 0.071 0.929 35 H 0.069 0.931 36 H 0.392 0.608 37 H 0.112 0.888 38 H 0.378 0.622 39 H -0.254 1.254 40 H -0.250 1.250 41 H 0.146 0.854 42 H 0.078 0.922 43 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.013 1.366 3.617 5.572 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.310 6.310 3 C -0.007 4.007 4 C -0.129 4.129 5 H 0.116 0.884 6 C -0.181 4.181 7 C 0.014 3.986 8 H 0.125 0.875 9 N -0.361 5.361 10 C 0.352 3.648 11 O -0.406 6.406 12 C -0.141 4.141 13 C -0.084 4.084 14 C -0.118 4.118 15 C -0.167 4.167 16 C 0.114 3.886 17 O -0.293 6.293 18 C -0.153 4.153 19 C -0.166 4.166 20 O -0.336 6.336 21 Si 0.578 3.422 22 C -0.063 4.063 23 C -0.176 4.176 24 H 0.060 0.940 25 H 0.060 0.940 26 H 0.105 0.895 27 H 0.069 0.931 28 H 0.070 0.930 29 H 0.111 0.889 30 H 0.094 0.906 31 H 0.236 0.764 32 H 0.150 0.850 33 H 0.095 0.905 34 H 0.090 0.910 35 H 0.088 0.912 36 H 0.250 0.750 37 H 0.129 0.871 38 H 0.225 0.775 39 H -0.179 1.179 40 H -0.174 1.174 41 H 0.163 0.837 42 H 0.096 0.904 43 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -3.123 1.793 2.555 4.416 hybrid contribution -0.098 0.256 1.392 1.419 sum -3.221 2.050 3.947 5.491 Atomic orbital electron populations 1.22761 0.80812 1.02993 1.00038 1.87893 1.19834 1.27839 1.95414 1.22558 0.92965 0.84922 1.00299 1.22662 0.93220 0.98222 0.98772 0.88384 1.23531 0.96988 1.01114 0.96502 1.21842 0.85189 0.95070 0.96467 0.87455 1.45564 1.12139 1.57036 1.21311 1.18113 0.82191 0.79452 0.85046 1.90811 1.82851 1.47442 1.19478 1.19797 0.94929 1.03458 0.95941 1.21092 0.98172 0.95425 0.93758 1.20223 0.93716 0.99910 0.97950 1.20700 1.03189 1.01008 0.91784 1.18323 0.87994 0.91254 0.90997 1.84824 1.38396 1.36706 1.69378 1.20692 0.97514 1.00418 0.96645 1.24864 0.95442 0.92943 1.03340 1.86554 1.52149 1.29209 1.65721 0.94625 0.86513 0.78045 0.83008 1.20943 0.90768 0.95415 0.99155 1.23335 0.97001 0.97232 1.00004 0.94036 0.93979 0.89485 0.93138 0.92961 0.88869 0.90603 0.76363 0.85019 0.90458 0.91026 0.91190 0.75026 0.87093 0.77484 1.17879 1.17422 0.83736 0.90355 0.88234 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 11.01 101.05 1.11 1.09 16 2 O -0.39 -0.57 10.70 -35.23 -0.38 -0.95 16 3 C 0.07 -0.06 5.78 37.15 0.21 0.15 16 4 C -0.11 0.18 3.90 -89.67 -0.35 -0.17 16 5 H 0.10 -0.15 8.14 -51.93 -0.42 -0.57 16 6 C -0.14 0.11 7.45 -25.78 -0.19 -0.08 16 7 C 0.12 -0.10 4.30 -67.12 -0.29 -0.39 16 8 H 0.11 0.06 7.50 -51.93 -0.39 -0.33 16 9 N -0.71 0.59 5.21 -54.04 -0.28 0.31 16 10 C 0.56 1.04 7.76 -12.44 -0.10 0.94 16 11 O -0.53 -2.76 15.96 5.29 0.08 -2.67 16 12 C -0.14 -0.10 5.87 -104.96 -0.62 -0.72 16 13 C -0.07 0.07 9.18 -39.22 -0.36 -0.29 16 14 C -0.12 0.05 5.89 -104.53 -0.62 -0.56 16 15 C -0.11 0.23 9.78 36.01 0.35 0.58 16 16 C 0.16 0.10 6.66 -39.02 -0.26 -0.16 16 17 O -0.48 -0.13 11.85 -18.82 -0.22 -0.36 16 18 C -0.15 -0.11 5.27 -104.54 -0.55 -0.66 16 19 C -0.05 -0.03 2.37 36.01 0.09 0.06 16 20 O -0.53 -0.80 12.88 -35.23 -0.45 -1.26 16 21 Si 0.68 0.19 29.91 -169.99 -5.08 -4.90 16 22 C -0.04 -0.04 8.20 -39.21 -0.32 -0.36 16 23 C -0.14 0.38 7.38 -25.92 -0.19 0.19 16 24 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 25 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 26 H 0.09 -0.13 8.14 -51.93 -0.42 -0.56 16 27 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 28 H 0.05 -0.08 7.85 -51.93 -0.41 -0.49 16 29 H 0.09 -0.10 7.90 -51.93 -0.41 -0.51 16 30 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 31 H 0.40 -1.29 6.73 -40.82 -0.27 -1.57 16 32 H 0.13 -0.50 6.39 -52.48 -0.34 -0.84 16 33 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 34 H 0.07 -0.17 7.53 -51.93 -0.39 -0.56 16 35 H 0.07 -0.24 8.08 -51.93 -0.42 -0.66 16 36 H 0.39 -1.57 9.06 45.56 0.41 -1.16 16 37 H 0.11 0.03 7.83 -51.93 -0.41 -0.37 16 38 H 0.38 -0.79 8.70 45.56 0.40 -0.39 16 39 H -0.25 -0.70 7.11 56.52 0.40 -0.30 16 40 H -0.25 -0.77 7.11 56.52 0.40 -0.36 16 41 H 0.15 0.07 4.70 -52.49 -0.25 -0.18 16 42 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 43 H 0.10 -0.35 8.10 -51.93 -0.42 -0.77 16 LS Contribution 357.03 15.07 5.38 5.38 Total: 0.00 -9.03 357.03 -8.50 -17.53 By element: Atomic # 1 Polarization: -7.24 SS G_CDS: -5.47 Total: -12.72 kcal Atomic # 6 Polarization: 1.70 SS G_CDS: -2.08 Total: -0.38 kcal Atomic # 7 Polarization: 0.59 SS G_CDS: -0.28 Total: 0.31 kcal Atomic # 8 Polarization: -4.27 SS G_CDS: -0.97 Total: -5.23 kcal Atomic # 14 Polarization: 0.19 SS G_CDS: -5.08 Total: -4.90 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -9.03 -8.50 -17.53 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_13287732.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.547 kcal (2) G-P(sol) polarization free energy of solvation -9.028 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.575 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.505 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.533 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.080 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds