Wall clock time and date at job start Tue Mar 9 2021 13:11:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42904 * 113.99706 * 2 1 4 4 C 1.52999 * 109.46846 * 179.97438 * 3 2 1 5 5 H 1.08995 * 112.84913 * 43.80381 * 4 3 2 6 6 C 1.53785 * 113.60847 * 174.99830 * 4 3 2 7 7 C 1.53781 * 87.07724 * 140.06639 * 6 4 3 8 8 H 1.09004 * 113.60985 * 219.93108 * 7 6 4 9 9 N 1.46500 * 113.61544 * 89.11831 * 7 6 4 10 10 C 1.34779 * 120.00114 * 156.53140 * 9 7 6 11 11 O 1.21600 * 119.99672 * 359.97438 * 10 9 7 12 12 C 1.47522 * 120.00210 * 179.97438 * 10 9 7 13 13 C 1.39773 * 120.06904 * 179.97438 * 12 10 9 14 14 C 1.37629 * 119.92914 * 180.02562 * 13 12 10 15 15 C 1.50697 * 119.96465 * 180.02562 * 14 13 12 16 16 O 1.42902 * 109.47290 * 104.97836 * 15 14 13 17 17 Si 1.86295 * 109.47105 * 344.97356 * 15 14 13 18 18 C 1.39203 * 120.06996 * 359.97387 * 14 13 12 19 19 N 1.39043 * 119.93121 * 180.02562 * 18 14 13 20 20 C 1.46901 * 110.99815 * 240.00456 * 19 18 14 21 21 C 1.46898 * 110.99710 * 116.04837 * 19 18 14 22 22 C 1.39238 * 120.13433 * 0.30025 * 18 14 13 23 23 C 1.37590 * 120.07342 * 359.44896 * 22 18 14 24 24 C 1.53776 * 87.17241 * 334.52264 * 7 6 4 25 25 H 1.08998 * 109.47000 * 60.00385 * 1 2 3 26 26 H 1.09008 * 109.47162 * 180.02562 * 1 2 3 27 27 H 1.08996 * 109.47444 * 299.99833 * 1 2 3 28 28 H 1.08994 * 109.47225 * 59.99431 * 3 2 1 29 29 H 1.09005 * 109.46568 * 299.99529 * 3 2 1 30 30 H 1.08991 * 113.61766 * 25.51894 * 6 4 3 31 31 H 1.09008 * 113.61100 * 254.61012 * 6 4 3 32 32 H 0.96996 * 119.99907 * 336.52282 * 9 7 6 33 33 H 1.08000 * 120.03508 * 359.97438 * 13 12 10 34 34 H 1.08998 * 109.47004 * 224.97346 * 15 14 13 35 35 H 0.96699 * 114.00359 * 59.99790 * 16 15 14 36 36 H 1.48502 * 110.00271 * 178.68048 * 17 15 14 37 37 H 1.48498 * 110.00400 * 300.00155 * 17 15 14 38 38 H 1.09002 * 109.47401 * 59.99935 * 20 19 18 39 39 H 1.09001 * 109.46874 * 299.99948 * 20 19 18 40 40 H 1.09004 * 109.46970 * 180.02562 * 20 19 18 41 41 H 1.09007 * 109.46909 * 183.95356 * 21 19 18 42 42 H 1.08998 * 109.47110 * 303.94963 * 21 19 18 43 43 H 1.09002 * 109.47061 * 63.95545 * 21 19 18 44 44 H 1.08002 * 119.96411 * 179.72290 * 22 18 14 45 45 H 1.07995 * 120.03848 * 180.27831 * 23 22 18 46 46 H 1.09000 * 113.61124 * 140.02737 * 24 7 6 47 47 H 1.08997 * 113.61412 * 270.92446 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1847 0.0006 5 1 3.9003 0.4285 -0.6943 6 6 4.2602 2.5355 -0.1222 7 6 5.2682 1.9989 0.9078 8 1 5.5818 2.7427 1.6403 9 7 6.3956 1.2817 0.3071 10 6 7.5589 1.1711 0.9787 11 8 7.6727 1.6670 2.0832 12 6 8.6940 0.4484 0.3741 13 6 9.9012 0.3333 1.0691 14 6 10.9584 -0.3410 0.5021 15 6 12.2601 -0.4661 1.2510 16 8 12.3898 -1.7942 1.7624 17 14 12.2831 0.7484 2.6635 18 6 10.8263 -0.9086 -0.7621 19 7 11.8961 -1.5897 -1.3320 20 6 12.3030 -0.9658 -2.5982 21 6 11.5735 -3.0098 -1.5246 22 6 9.6269 -0.7907 -1.4594 23 6 8.5645 -0.1222 -0.8958 24 6 4.1470 1.0741 1.4101 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3634 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8899 28 1 1.6885 1.8464 0.8899 29 1 1.6885 1.8463 -0.8901 30 1 3.6740 3.3801 0.2397 31 1 4.6936 2.7105 -1.1070 32 1 6.3049 0.8864 -0.5740 33 1 10.0044 0.7738 2.0498 34 1 13.0894 -0.2542 0.5761 35 1 12.3856 -2.4803 1.0810 36 1 13.5482 0.6130 3.4293 37 1 12.1490 2.1334 2.1448 38 1 12.6033 0.0659 -2.4149 39 1 11.4663 -0.9821 -3.2966 40 1 13.1411 -1.5185 -3.0228 41 1 12.4504 -3.5331 -1.9062 42 1 11.2756 -3.4472 -0.5717 43 1 10.7554 -3.1030 -2.2389 44 1 9.5289 -1.2283 -2.4419 45 1 7.6331 -0.0350 -1.4352 46 1 4.4890 0.0702 1.6617 47 1 3.5299 1.5200 2.1902 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535612_13422196.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:56 Heat of formation + Delta-G solvation = -43.530006 kcal Electronic energy + Delta-G solvation = -27308.354551 eV Core-core repulsion = 23459.091177 eV Total energy + Delta-G solvation = -3849.263374 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.177 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -41.82802 -41.03218 -39.64174 -38.25351 -37.64431 -37.23152 -34.58686 -32.71462 -31.39209 -29.68778 -28.78616 -27.12737 -26.91228 -26.73997 -26.07948 -23.84689 -23.21065 -22.89867 -21.29067 -20.34458 -19.12397 -17.95107 -17.89448 -17.43901 -17.35746 -16.96066 -16.65276 -16.43804 -16.33414 -15.97645 -15.83127 -15.54704 -15.34041 -15.10536 -14.80004 -14.60344 -14.32400 -14.02435 -13.98584 -13.78628 -13.63386 -13.53497 -13.13466 -13.13030 -12.88472 -12.85183 -12.69989 -12.43879 -11.91635 -11.89937 -11.63379 -11.34731 -11.28663 -11.12209 -10.89258 -10.62943 -10.14226 -10.09193 -9.82650 -9.75324 -4.72599 -0.39955 0.13516 1.50718 1.69027 1.80272 2.00554 2.10729 2.59919 2.64700 2.71541 3.36353 3.49726 3.51934 3.58242 3.67190 3.78621 3.85898 3.90884 3.97705 4.06347 4.14669 4.15534 4.24765 4.29993 4.34085 4.35772 4.36538 4.40578 4.49275 4.51797 4.57993 4.61096 4.66161 4.67691 4.73824 4.74432 4.74868 4.80285 4.98974 5.00204 5.02484 5.09071 5.12549 5.19681 5.47920 5.55693 5.57958 6.10495 6.16626 6.41662 6.68114 7.16772 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.391 6.391 3 C 0.069 3.931 4 C -0.110 4.110 5 H 0.097 0.903 6 C -0.138 4.138 7 C 0.120 3.880 8 H 0.108 0.892 9 N -0.709 5.709 10 C 0.563 3.437 11 O -0.527 6.527 12 C -0.133 4.133 13 C -0.042 4.042 14 C -0.099 4.099 15 C -0.062 4.062 16 O -0.533 6.533 17 Si 0.730 3.270 18 C 0.124 3.876 19 N -0.518 5.518 20 C 0.025 3.975 21 C 0.023 3.977 22 C -0.153 4.153 23 C -0.071 4.071 24 C -0.143 4.143 25 H 0.041 0.959 26 H 0.087 0.913 27 H 0.042 0.958 28 H 0.052 0.948 29 H 0.050 0.950 30 H 0.099 0.901 31 H 0.077 0.923 32 H 0.400 0.600 33 H 0.147 0.853 34 H 0.081 0.919 35 H 0.364 0.636 36 H -0.252 1.252 37 H -0.251 1.251 38 H 0.072 0.928 39 H 0.035 0.965 40 H 0.078 0.922 41 H 0.080 0.920 42 H 0.074 0.926 43 H 0.036 0.964 44 H 0.129 0.871 45 H 0.128 0.872 46 H 0.075 0.925 47 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.369 -0.612 -5.234 6.254 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.310 6.310 3 C -0.007 4.007 4 C -0.129 4.129 5 H 0.116 0.884 6 C -0.176 4.176 7 C 0.015 3.985 8 H 0.126 0.874 9 N -0.361 5.361 10 C 0.350 3.650 11 O -0.403 6.403 12 C -0.136 4.136 13 C -0.061 4.061 14 C -0.100 4.100 15 C -0.171 4.171 16 O -0.339 6.339 17 Si 0.629 3.371 18 C 0.030 3.970 19 N -0.239 5.239 20 C -0.121 4.121 21 C -0.123 4.123 22 C -0.173 4.173 23 C -0.091 4.091 24 C -0.181 4.181 25 H 0.060 0.940 26 H 0.105 0.895 27 H 0.060 0.940 28 H 0.071 0.929 29 H 0.069 0.931 30 H 0.118 0.882 31 H 0.096 0.904 32 H 0.236 0.764 33 H 0.164 0.836 34 H 0.098 0.902 35 H 0.212 0.788 36 H -0.177 1.177 37 H -0.175 1.175 38 H 0.091 0.909 39 H 0.054 0.946 40 H 0.097 0.903 41 H 0.098 0.902 42 H 0.093 0.907 43 H 0.054 0.946 44 H 0.147 0.853 45 H 0.146 0.854 46 H 0.094 0.906 47 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -2.326 0.599 -3.202 4.003 hybrid contribution -0.573 -0.689 -2.848 2.986 sum -2.899 -0.090 -6.050 6.710 Atomic orbital electron populations 1.22761 0.80821 1.02984 1.00040 1.87892 1.19830 1.27855 1.95415 1.22561 0.92976 0.84908 1.00300 1.22659 0.93201 0.98221 0.98799 0.88441 1.23336 0.97009 0.97215 1.00014 1.21837 0.85205 0.95071 0.96435 0.87430 1.45565 1.12118 1.57116 1.21299 1.18134 0.82200 0.79540 0.85082 1.90821 1.82791 1.47351 1.19375 1.19874 0.94898 1.02931 0.95876 1.21036 0.90704 0.95283 0.99088 1.20255 0.96946 0.98618 0.94211 1.25286 0.93944 0.92156 1.05759 1.86737 1.96274 1.14332 1.36519 0.92880 0.86976 0.75101 0.82126 1.18842 0.89612 0.95409 0.93146 1.59463 1.34337 1.03199 1.26873 1.22501 1.00562 1.00499 0.88544 1.22550 1.01190 0.86527 1.02070 1.21581 0.93617 1.01271 1.00874 1.21151 0.98626 0.95505 0.93800 1.23527 0.96992 1.01131 0.96473 0.94039 0.89496 0.93972 0.92943 0.93149 0.88230 0.90388 0.76414 0.83607 0.90170 0.78763 1.17707 1.17492 0.90945 0.94599 0.90295 0.90157 0.90680 0.94556 0.85268 0.85374 0.90609 0.88860 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.09 16 2 O -0.39 -0.63 10.70 -35.23 -0.38 -1.01 16 3 C 0.07 -0.05 5.78 37.16 0.21 0.17 16 4 C -0.11 0.16 3.90 -89.67 -0.35 -0.19 16 5 H 0.10 -0.13 8.14 -51.93 -0.42 -0.55 16 6 C -0.14 0.35 7.38 -25.92 -0.19 0.16 16 7 C 0.12 -0.07 4.29 -67.12 -0.29 -0.36 16 8 H 0.11 0.09 7.50 -51.93 -0.39 -0.30 16 9 N -0.71 0.36 5.21 -54.06 -0.28 0.08 16 10 C 0.56 1.30 7.76 -12.47 -0.10 1.21 16 11 O -0.53 -3.03 15.96 5.28 0.08 -2.95 16 12 C -0.13 -0.16 5.88 -104.95 -0.62 -0.78 16 13 C -0.04 -0.08 8.19 -39.23 -0.32 -0.40 16 14 C -0.10 -0.15 5.28 -104.49 -0.55 -0.70 16 15 C -0.06 -0.11 2.29 36.00 0.08 -0.03 16 16 O -0.53 -1.26 12.65 -35.23 -0.45 -1.71 16 17 Si 0.73 1.36 30.17 -169.99 -5.13 -3.77 16 18 C 0.12 0.04 4.65 -83.86 -0.39 -0.35 16 19 N -0.52 0.39 3.70 -186.86 -0.69 -0.31 16 20 C 0.03 -0.04 9.33 60.07 0.56 0.52 16 21 C 0.02 -0.05 9.00 60.06 0.54 0.49 16 22 C -0.15 0.13 8.57 -39.45 -0.34 -0.21 16 23 C -0.07 0.07 9.53 -39.23 -0.37 -0.30 16 24 C -0.14 0.07 7.45 -25.78 -0.19 -0.12 16 25 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 26 H 0.09 -0.12 8.14 -51.92 -0.42 -0.55 16 27 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 28 H 0.05 -0.07 7.85 -51.93 -0.41 -0.48 16 29 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 30 H 0.10 -0.32 8.10 -51.93 -0.42 -0.74 16 31 H 0.08 -0.24 8.14 -51.92 -0.42 -0.67 16 32 H 0.40 -1.18 6.72 -40.82 -0.27 -1.45 16 33 H 0.15 0.27 4.70 -52.49 -0.25 0.02 16 34 H 0.08 0.14 7.78 -51.93 -0.40 -0.26 16 35 H 0.36 0.12 7.56 45.56 0.34 0.47 16 36 H -0.25 -1.08 7.11 56.52 0.40 -0.68 16 37 H -0.25 -0.84 7.11 56.52 0.40 -0.44 16 38 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 39 H 0.04 -0.08 7.08 -51.93 -0.37 -0.45 16 40 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 41 H 0.08 -0.24 8.14 -51.92 -0.42 -0.66 16 42 H 0.07 -0.17 7.52 -51.93 -0.39 -0.56 16 43 H 0.04 -0.09 7.46 -51.93 -0.39 -0.48 16 44 H 0.13 -0.31 7.01 -52.49 -0.37 -0.67 16 45 H 0.13 -0.48 6.39 -52.49 -0.34 -0.82 16 46 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 47 H 0.09 -0.08 7.91 -51.93 -0.41 -0.49 16 LS Contribution 377.90 15.07 5.69 5.69 Total: 0.00 -6.66 377.90 -9.83 -16.48 By element: Atomic # 1 Polarization: -5.22 SS G_CDS: -7.48 Total: -12.70 kcal Atomic # 6 Polarization: 1.39 SS G_CDS: -1.20 Total: 0.19 kcal Atomic # 7 Polarization: 0.74 SS G_CDS: -0.97 Total: -0.23 kcal Atomic # 8 Polarization: -4.93 SS G_CDS: -0.74 Total: -5.67 kcal Atomic # 14 Polarization: 1.36 SS G_CDS: -5.13 Total: -3.77 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -6.66 -9.83 -16.48 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_13422196.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.047 kcal (2) G-P(sol) polarization free energy of solvation -6.656 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.703 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.827 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.483 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.530 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds