Wall clock time and date at job start Tue Mar 9 2021 13:11:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42906 * 113.99502 * 2 1 4 4 C 1.52999 * 109.46557 * 180.02562 * 3 2 1 5 5 H 1.09001 * 112.85210 * 43.81143 * 4 3 2 6 6 C 1.53785 * 113.61042 * 175.00336 * 4 3 2 7 7 C 1.53780 * 87.08199 * 140.06435 * 6 4 3 8 8 H 1.08993 * 113.61365 * 219.92989 * 7 6 4 9 9 N 1.46505 * 113.61424 * 89.11439 * 7 6 4 10 10 C 1.34776 * 120.00194 * 154.99654 * 9 7 6 11 11 O 1.21286 * 119.99912 * 0.02562 * 10 9 7 12 12 C 1.50694 * 119.99907 * 180.02562 * 10 9 7 13 13 C 1.52998 * 109.47317 * 299.99942 * 12 10 9 14 14 O 1.42909 * 109.46951 * 180.02562 * 12 10 9 15 15 C 1.36019 * 116.99990 * 209.99874 * 14 12 10 16 16 C 1.38623 * 120.07955 * 269.97869 * 15 14 12 17 17 Cl 1.73602 * 120.00804 * 0.02562 * 16 15 14 18 18 C 1.38378 * 119.97965 * 179.78907 * 16 15 14 19 19 C 1.38209 * 120.12953 * 0.49098 * 18 16 15 20 20 C 1.50703 * 119.92051 * 179.76593 * 19 18 16 21 21 O 1.42896 * 109.47055 * 119.72171 * 20 19 18 22 22 Si 1.86304 * 109.46911 * 359.72063 * 20 19 18 23 23 C 1.38278 * 120.15800 * 359.48492 * 19 18 16 24 24 C 1.38561 * 120.01542 * 0.27978 * 23 19 18 25 25 O 1.35990 * 120.06035 * 180.02562 * 24 23 19 26 26 C 1.42894 * 117.00679 * 0.02562 * 25 24 23 27 27 C 1.53777 * 87.08105 * 334.56808 * 7 6 4 28 28 H 1.08992 * 109.47582 * 59.99726 * 1 2 3 29 29 H 1.09002 * 109.46510 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.46766 * 299.99112 * 1 2 3 31 31 H 1.08999 * 109.46624 * 60.00759 * 3 2 1 32 32 H 1.09002 * 109.47271 * 300.00365 * 3 2 1 33 33 H 1.08996 * 113.61708 * 25.51175 * 6 4 3 34 34 H 1.09001 * 113.61497 * 254.61623 * 6 4 3 35 35 H 0.97002 * 119.99493 * 335.00507 * 9 7 6 36 36 H 1.08996 * 109.47305 * 60.00902 * 12 10 9 37 37 H 1.09003 * 109.46693 * 60.00649 * 13 12 10 38 38 H 1.09001 * 109.47322 * 180.02562 * 13 12 10 39 39 H 1.08996 * 109.47717 * 300.00709 * 13 12 10 40 40 H 1.07994 * 119.93187 * 180.24948 * 18 16 15 41 41 H 1.09002 * 109.47152 * 239.71979 * 20 19 18 42 42 H 0.96708 * 114.00101 * 299.99358 * 21 20 19 43 43 H 1.48497 * 110.00028 * 58.68223 * 22 20 19 44 44 H 1.48501 * 109.99652 * 179.97438 * 22 20 19 45 45 H 1.07997 * 119.99107 * 180.25598 * 23 19 18 46 46 H 1.08998 * 109.47354 * 59.99776 * 26 25 24 47 47 H 1.08996 * 109.47809 * 180.02562 * 26 25 24 48 48 H 1.09002 * 109.46999 * 300.00379 * 26 25 24 49 49 H 1.09004 * 113.61577 * 139.97941 * 27 7 6 50 50 H 1.08996 * 113.61514 * 270.88273 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3056 0.0000 4 6 3.5354 1.1847 -0.0006 5 1 3.8998 0.4289 -0.6963 6 6 4.2602 2.5355 -0.1234 7 6 5.2691 1.9985 0.9055 8 1 5.5832 2.7420 1.6380 9 7 6.3960 1.2815 0.3036 10 6 7.5695 1.1972 0.9608 11 8 7.6926 1.7145 2.0509 12 6 8.7288 0.4601 0.3413 13 6 8.3351 -0.9984 0.0992 14 8 9.8514 0.5097 1.2243 15 6 11.0864 0.4868 0.6549 16 6 11.7230 -0.7229 0.4247 17 17 10.9439 -2.2111 0.8625 18 6 12.9776 -0.7440 -0.1588 19 6 13.6024 0.4396 -0.5036 20 6 14.9709 0.4114 -1.1339 21 8 14.9129 1.0191 -2.4259 22 14 15.5403 -1.3544 -1.3031 23 6 12.9722 1.6495 -0.2769 24 6 11.7139 1.6777 0.3025 25 8 11.0932 2.8670 0.5254 26 6 11.7962 4.0488 0.1369 27 6 4.1471 1.0736 1.4059 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3632 -1.0277 0.0005 30 1 -0.3633 0.5137 0.8901 31 1 1.6886 1.8463 0.8901 32 1 1.6885 1.8465 -0.8900 33 1 3.6743 3.3800 0.2392 34 1 4.6926 2.7110 -1.1085 35 1 6.2974 0.8676 -0.5682 36 1 8.9915 0.9279 -0.6074 37 1 7.4788 -1.0365 -0.5741 38 1 9.1738 -1.5316 -0.3484 39 1 8.0724 -1.4662 1.0480 40 1 13.4711 -1.6870 -0.3415 41 1 15.6719 0.9606 -0.5053 42 1 14.3071 0.5814 -3.0396 43 1 14.5762 -2.1218 -2.1318 44 1 16.8886 -1.3959 -1.9240 45 1 13.4612 2.5725 -0.5511 46 1 11.9943 4.0181 -0.9345 47 1 11.1911 4.9248 0.3700 48 1 12.7401 4.1048 0.6793 49 1 4.4882 0.0689 1.6555 50 1 3.5302 1.5184 2.1867 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16535612_13428712.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:58 Heat of formation + Delta-G solvation = -124.875647 kcal Electronic energy + Delta-G solvation = -34195.778586 eV Core-core repulsion = 29411.249535 eV Total energy + Delta-G solvation = -4784.529052 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.142 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -42.03366 -41.39746 -40.08950 -39.30094 -38.98975 -38.19023 -37.78124 -36.99364 -34.81689 -32.97401 -31.49368 -31.34822 -29.61297 -28.58980 -27.05976 -26.80244 -26.62425 -25.49194 -23.70222 -23.56053 -22.81422 -21.85742 -20.34406 -19.66864 -18.85948 -18.68205 -18.32876 -17.57159 -17.45176 -17.25159 -16.93662 -16.80407 -16.45723 -16.33102 -16.24165 -16.14589 -16.05595 -15.80626 -15.58475 -15.06288 -14.80934 -14.54701 -14.42457 -14.21746 -14.15540 -13.86143 -13.73287 -13.55765 -13.45606 -13.29054 -12.84585 -12.80736 -12.73853 -12.65475 -12.40611 -12.37809 -12.00127 -11.90261 -11.82268 -11.65295 -11.59002 -11.38106 -11.30031 -10.79655 -10.71854 -10.59286 -10.15362 -9.84554 -9.45146 -4.91516 -0.35985 -0.04119 0.83038 1.24855 1.41368 1.59372 1.60831 1.94204 2.13794 2.20622 2.65221 2.79373 3.29422 3.45139 3.45718 3.51996 3.59896 3.70412 3.76774 3.80402 3.83780 3.94585 3.96050 3.98792 4.03715 4.25605 4.29242 4.34567 4.39209 4.47236 4.49882 4.56772 4.59673 4.61504 4.63971 4.65624 4.67705 4.70625 4.74920 4.82115 4.82656 4.84907 5.00849 5.06885 5.08409 5.09815 5.16120 5.21855 5.54181 5.89132 6.23328 6.29192 6.44293 6.44976 7.10567 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.417 6.417 3 C 0.065 3.935 4 C -0.103 4.103 5 H 0.101 0.899 6 C -0.120 4.120 7 C 0.113 3.887 8 H 0.084 0.916 9 N -0.694 5.694 10 C 0.520 3.480 11 O -0.563 6.563 12 C 0.077 3.923 13 C -0.176 4.176 14 O -0.309 6.309 15 C 0.053 3.947 16 C -0.017 4.017 17 Cl -0.037 7.037 18 C -0.132 4.132 19 C -0.060 4.060 20 C -0.075 4.075 21 O -0.541 6.541 22 Si 0.751 3.249 23 C -0.164 4.164 24 C 0.118 3.882 25 O -0.323 6.323 26 C 0.016 3.984 27 C -0.145 4.145 28 H 0.050 0.950 29 H 0.090 0.910 30 H 0.047 0.953 31 H 0.056 0.944 32 H 0.062 0.938 33 H 0.109 0.891 34 H 0.092 0.908 35 H 0.416 0.584 36 H 0.105 0.895 37 H 0.099 0.901 38 H 0.084 0.916 39 H 0.060 0.940 40 H 0.161 0.839 41 H 0.138 0.862 42 H 0.389 0.611 43 H -0.275 1.275 44 H -0.296 1.296 45 H 0.159 0.841 46 H 0.073 0.927 47 H 0.113 0.887 48 H 0.069 0.931 49 H 0.059 0.941 50 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.016 0.898 -5.758 5.915 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.337 6.337 3 C -0.011 4.011 4 C -0.122 4.122 5 H 0.119 0.881 6 C -0.158 4.158 7 C 0.008 3.992 8 H 0.103 0.897 9 N -0.348 5.348 10 C 0.306 3.694 11 O -0.441 6.441 12 C 0.019 3.981 13 C -0.233 4.233 14 O -0.225 6.225 15 C 0.007 3.993 16 C -0.044 4.044 17 Cl -0.008 7.008 18 C -0.150 4.150 19 C -0.061 4.061 20 C -0.184 4.184 21 O -0.349 6.349 22 Si 0.656 3.344 23 C -0.183 4.183 24 C 0.071 3.929 25 O -0.236 6.236 26 C -0.078 4.078 27 C -0.184 4.184 28 H 0.069 0.931 29 H 0.109 0.891 30 H 0.065 0.935 31 H 0.074 0.926 32 H 0.080 0.920 33 H 0.128 0.872 34 H 0.111 0.889 35 H 0.254 0.746 36 H 0.123 0.877 37 H 0.118 0.882 38 H 0.103 0.897 39 H 0.079 0.921 40 H 0.178 0.822 41 H 0.155 0.845 42 H 0.238 0.762 43 H -0.201 1.201 44 H -0.224 1.224 45 H 0.176 0.824 46 H 0.092 0.908 47 H 0.131 0.869 48 H 0.088 0.912 49 H 0.078 0.922 50 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -0.464 0.808 -4.931 5.018 hybrid contribution -0.837 0.452 -1.165 1.503 sum -1.300 1.260 -6.096 6.359 Atomic orbital electron populations 1.22879 0.79913 1.03533 1.00738 1.87853 1.21033 1.29210 1.95589 1.22677 0.93098 0.84295 1.01016 1.22567 0.93015 0.98883 0.97685 0.88124 1.23277 0.95643 0.96924 0.99942 1.21860 0.85276 0.94910 0.97174 0.89732 1.45437 1.10341 1.56219 1.22817 1.20579 0.84158 0.79458 0.85195 1.90731 1.83475 1.47566 1.22281 1.22285 0.84741 0.97919 0.93198 1.22581 1.04363 0.92823 1.03537 1.86245 1.10562 1.93571 1.32094 1.17843 0.87854 0.89535 1.04049 1.20979 0.95404 0.86713 1.01323 1.98393 1.80166 1.31014 1.91243 1.20928 0.93119 0.99550 1.01438 1.20156 0.96930 0.91708 0.97313 1.25182 0.95145 1.12332 0.85776 1.86594 1.68328 1.57301 1.22697 0.94006 0.76751 0.73835 0.89815 1.21289 0.93621 1.00522 1.02821 1.19378 0.92478 0.85728 0.95285 1.86220 1.45553 1.12998 1.78822 1.23428 0.98712 0.84462 1.01241 1.23489 0.97199 1.00141 0.97555 0.93108 0.89136 0.93478 0.92594 0.91993 0.87217 0.88906 0.74615 0.87738 0.88211 0.89737 0.92059 0.82232 0.84483 0.76165 1.20134 1.22381 0.82385 0.90849 0.86903 0.91214 0.92204 0.88874 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 11.01 113.37 1.25 1.22 16 2 O -0.42 -1.49 10.70 -148.98 -1.59 -3.08 16 3 C 0.07 -0.10 5.78 71.98 0.42 0.32 16 4 C -0.10 0.28 3.88 -10.27 -0.04 0.24 16 5 H 0.10 -0.31 8.14 -2.39 -0.02 -0.33 16 6 C -0.12 0.62 7.39 31.12 0.23 0.85 16 7 C 0.11 0.09 4.32 45.51 0.20 0.29 16 8 H 0.08 0.48 7.46 -2.39 -0.02 0.46 16 9 N -0.69 -0.26 5.16 -440.04 -2.27 -2.53 16 10 C 0.52 4.17 7.23 87.66 0.63 4.81 16 11 O -0.56 -10.48 16.10 15.99 0.26 -10.22 16 12 C 0.08 0.34 3.20 29.85 0.10 0.43 16 13 C -0.18 0.04 8.29 71.98 0.60 0.64 16 14 O -0.31 -3.32 8.55 -67.36 -0.58 -3.90 16 15 C 0.05 0.36 5.56 22.58 0.13 0.48 16 16 C -0.02 -0.05 6.24 22.40 0.14 0.09 16 17 Cl -0.04 -0.11 24.90 -2.72 -0.07 -0.18 16 18 C -0.13 0.14 8.45 22.30 0.19 0.32 16 19 C -0.06 0.12 5.39 -19.86 -0.11 0.01 16 20 C -0.08 0.31 2.82 71.24 0.20 0.51 16 21 O -0.54 1.02 12.77 -148.98 -1.90 -0.89 16 22 Si 0.75 -3.13 29.78 68.60 2.04 -1.09 16 23 C -0.16 0.02 8.60 22.36 0.19 0.21 16 24 C 0.12 0.58 6.70 22.56 0.15 0.73 16 25 O -0.32 -2.08 10.28 -79.57 -0.82 -2.90 16 26 C 0.02 -0.03 9.81 113.37 1.11 1.08 16 27 C -0.15 -0.11 7.43 31.12 0.23 0.12 16 28 H 0.05 -0.17 8.14 -2.39 -0.02 -0.19 16 29 H 0.09 -0.23 8.14 -2.39 -0.02 -0.25 16 30 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 31 H 0.06 -0.14 7.85 -2.39 -0.02 -0.16 16 32 H 0.06 -0.23 8.14 -2.39 -0.02 -0.25 16 33 H 0.11 -0.75 8.10 -2.39 -0.02 -0.77 16 34 H 0.09 -0.70 8.14 -2.39 -0.02 -0.71 16 35 H 0.42 -2.56 8.12 -92.71 -0.75 -3.31 16 36 H 0.10 0.04 7.91 -2.39 -0.02 0.03 16 37 H 0.10 -0.61 7.56 -2.39 -0.02 -0.63 16 38 H 0.08 -0.05 5.45 -2.39 -0.01 -0.06 16 39 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 40 H 0.16 -0.77 4.86 -2.91 -0.01 -0.79 16 41 H 0.14 -0.86 7.96 -2.39 -0.02 -0.88 16 42 H 0.39 -2.87 8.70 -74.05 -0.64 -3.52 16 43 H -0.28 0.21 7.10 99.48 0.71 0.92 16 44 H -0.30 -1.00 7.11 99.48 0.71 -0.30 16 45 H 0.16 -0.52 6.30 -2.91 -0.02 -0.53 16 46 H 0.07 -0.40 7.66 -2.39 -0.02 -0.42 16 47 H 0.11 -0.47 8.14 -2.39 -0.02 -0.49 16 48 H 0.07 -0.30 7.66 -2.39 -0.02 -0.31 16 49 H 0.06 0.24 8.14 -2.39 -0.02 0.22 16 50 H 0.09 0.04 7.90 -2.39 -0.02 0.02 16 Total: 0.00 -24.99 421.33 0.32 -24.67 By element: Atomic # 1 Polarization: -11.86 SS G_CDS: -0.37 Total: -12.23 kcal Atomic # 6 Polarization: 6.73 SS G_CDS: 5.61 Total: 12.34 kcal Atomic # 7 Polarization: -0.26 SS G_CDS: -2.27 Total: -2.53 kcal Atomic # 8 Polarization: -16.35 SS G_CDS: -4.63 Total: -20.99 kcal Atomic # 14 Polarization: -3.13 SS G_CDS: 2.04 Total: -1.09 kcal Atomic # 17 Polarization: -0.11 SS G_CDS: -0.07 Total: -0.18 kcal Total: -24.99 0.32 -24.67 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_13428712.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -100.201 kcal (2) G-P(sol) polarization free energy of solvation -24.990 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.191 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.315 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.674 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.876 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds