Wall clock time and date at job start Tue Mar 9 2021 13:12:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42901 * 113.99851 * 2 1 4 4 C 1.53001 * 109.46897 * 180.02562 * 3 2 1 5 5 H 1.09000 * 112.84815 * 316.19190 * 4 3 2 6 6 C 1.53773 * 113.61898 * 87.50196 * 4 3 2 7 7 C 1.53780 * 87.08433 * 139.98030 * 6 4 3 8 8 H 1.09005 * 113.68897 * 220.01230 * 7 6 4 9 9 N 1.46497 * 113.61149 * 89.11618 * 7 6 4 10 10 C 1.34780 * 119.99566 * 107.50858 * 9 7 6 11 11 O 1.21280 * 120.00423 * 359.97438 * 10 9 7 12 12 C 1.50701 * 119.99795 * 180.02562 * 10 9 7 13 13 C 1.52997 * 109.47212 * 179.97438 * 12 10 9 14 14 O 1.42895 * 109.47503 * 180.02562 * 13 12 10 15 15 C 1.35900 * 117.00356 * 180.02562 * 14 13 12 16 16 C 1.38728 * 120.05549 * 359.72471 * 15 14 13 17 17 C 1.38148 * 119.94480 * 179.74612 * 16 15 14 18 18 C 1.38266 * 120.05356 * 0.50590 * 17 16 15 19 19 C 1.50700 * 119.94119 * 179.74695 * 18 17 16 20 20 O 1.42899 * 109.47089 * 245.02241 * 19 18 17 21 21 Si 1.86295 * 109.47209 * 5.02328 * 19 18 17 22 22 C 1.38259 * 120.11046 * 359.76719 * 18 17 16 23 23 C 1.38145 * 120.06180 * 359.97438 * 22 18 17 24 24 C 1.53777 * 87.07975 * 334.56808 * 7 6 4 25 25 H 1.08995 * 109.46824 * 59.99853 * 1 2 3 26 26 H 1.08997 * 109.46883 * 179.97438 * 1 2 3 27 27 H 1.08996 * 109.47156 * 300.00190 * 1 2 3 28 28 H 1.09001 * 109.47134 * 60.00617 * 3 2 1 29 29 H 1.08998 * 109.47466 * 299.99989 * 3 2 1 30 30 H 1.09008 * 113.61284 * 25.43083 * 6 4 3 31 31 H 1.08993 * 113.61930 * 254.53198 * 6 4 3 32 32 H 0.96995 * 120.00423 * 287.50164 * 9 7 6 33 33 H 1.09002 * 109.47060 * 299.99722 * 12 10 9 34 34 H 1.09001 * 109.47380 * 59.99809 * 12 10 9 35 35 H 1.09002 * 109.47153 * 299.99998 * 13 12 10 36 36 H 1.08998 * 109.47533 * 59.99628 * 13 12 10 37 37 H 1.08004 * 120.02452 * 359.97438 * 16 15 14 38 38 H 1.08002 * 119.97189 * 180.22949 * 17 16 15 39 39 H 1.09003 * 109.46757 * 125.02059 * 19 18 17 40 40 H 0.96695 * 114.00209 * 180.02562 * 20 19 18 41 41 H 1.48510 * 109.99807 * 178.68334 * 21 19 18 42 42 H 1.48507 * 109.99958 * 299.99686 * 21 19 18 43 43 H 1.08008 * 119.97239 * 179.97438 * 22 18 17 44 44 H 1.07998 * 120.03366 * 179.97438 * 23 22 18 45 45 H 1.09004 * 113.61607 * 139.97450 * 24 7 6 46 46 H 1.08996 * 113.61755 * 270.88355 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5355 1.1846 -0.0006 5 1 3.9004 0.4285 0.6944 6 6 4.1442 1.0750 -1.4085 7 6 5.2672 1.9995 -0.9094 8 1 5.5797 2.7438 -1.6419 9 7 6.3953 1.2819 -0.3106 10 6 7.5675 1.1984 -0.9705 11 8 7.6883 1.7168 -2.0603 12 6 8.7278 0.4597 -0.3548 13 6 9.9278 0.5141 -1.3025 14 8 11.0278 -0.1868 -0.7190 15 6 12.1807 -0.2333 -1.4371 16 6 12.2498 0.3781 -2.6805 17 6 13.4245 0.3339 -3.4062 18 6 14.5274 -0.3279 -2.8990 19 6 15.8057 -0.3794 -3.6954 20 8 16.0813 -1.7315 -4.0670 21 14 15.6239 0.6615 -5.2297 22 6 14.4592 -0.9429 -1.6626 23 6 13.2886 -0.8971 -0.9305 24 6 4.2605 2.5353 0.1221 25 1 -0.3633 0.5138 -0.8899 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8899 28 1 1.6887 1.8464 0.8900 29 1 1.6886 1.8464 -0.8899 30 1 3.5256 1.5207 -2.1876 31 1 4.4848 0.0707 -1.6600 32 1 6.2987 0.8670 0.5608 33 1 8.9927 0.9256 0.5944 34 1 8.4474 -0.5796 -0.1836 35 1 9.6627 0.0479 -2.2515 36 1 10.2085 1.5532 -1.4741 37 1 11.3872 0.8914 -3.0790 38 1 13.4800 0.8130 -4.3726 39 1 16.6265 0.0056 -3.0902 40 1 16.8919 -1.8402 -4.5828 41 1 16.8888 0.6446 -6.0077 42 1 14.5079 0.1468 -6.0634 43 1 15.3220 -1.4597 -1.2687 44 1 13.2357 -1.3780 0.0351 45 1 4.6949 2.7097 1.1065 46 1 3.6737 3.3801 -0.2384 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535612_4549602.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:27 Heat of formation + Delta-G solvation = -97.593568 kcal Electronic energy + Delta-G solvation = -25833.165139 eV Core-core repulsion = 21883.838730 eV Total energy + Delta-G solvation = -3949.326408 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -41.52527 -41.09206 -39.83372 -38.98513 -38.23836 -37.28470 -34.53304 -33.29187 -31.94226 -31.46365 -29.74559 -27.15480 -26.79691 -26.44553 -25.53102 -23.80741 -23.22119 -22.03886 -21.57273 -20.36006 -19.46110 -18.48389 -18.02468 -17.46049 -17.43728 -17.23886 -17.01540 -16.79859 -16.69035 -16.36233 -15.93143 -15.62171 -15.54824 -15.22411 -14.67713 -14.63243 -14.43755 -14.24669 -14.09754 -13.90771 -13.70783 -13.61142 -13.55560 -13.00410 -12.84678 -12.77206 -12.45421 -12.31347 -11.94444 -11.93625 -11.68270 -11.65539 -11.56099 -11.37638 -11.00137 -10.64580 -10.43291 -10.14258 -9.91471 -9.08806 -4.93114 0.40225 0.43486 1.32662 1.50553 1.62173 1.68171 1.98835 2.45941 2.69429 2.72426 3.35068 3.42529 3.48933 3.52108 3.70741 3.83410 3.85869 3.86384 3.89043 3.90777 4.06562 4.23234 4.28226 4.30572 4.35274 4.36138 4.40204 4.47749 4.49005 4.50222 4.58651 4.61289 4.63056 4.68474 4.72597 4.74848 4.81349 4.96771 4.98379 5.06211 5.07998 5.29177 5.39896 5.49079 5.61999 5.80873 6.15223 6.33452 6.43329 6.49233 7.09001 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.391 6.391 3 C 0.069 3.931 4 C -0.110 4.110 5 H 0.099 0.901 6 C -0.143 4.143 7 C 0.118 3.882 8 H 0.107 0.893 9 N -0.711 5.711 10 C 0.524 3.476 11 O -0.536 6.536 12 C -0.141 4.141 13 C 0.074 3.926 14 O -0.316 6.316 15 C 0.137 3.863 16 C -0.202 4.202 17 C -0.074 4.074 18 C -0.112 4.112 19 C -0.070 4.070 20 O -0.537 6.537 21 Si 0.680 3.320 22 C -0.053 4.053 23 C -0.151 4.151 24 C -0.138 4.138 25 H 0.041 0.959 26 H 0.087 0.913 27 H 0.041 0.959 28 H 0.051 0.949 29 H 0.052 0.948 30 H 0.092 0.908 31 H 0.074 0.926 32 H 0.404 0.596 33 H 0.108 0.892 34 H 0.108 0.892 35 H 0.073 0.927 36 H 0.074 0.926 37 H 0.135 0.865 38 H 0.129 0.871 39 H 0.075 0.925 40 H 0.379 0.621 41 H -0.262 1.262 42 H -0.256 1.256 43 H 0.131 0.869 44 H 0.134 0.866 45 H 0.078 0.922 46 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.028 3.057 3.616 5.151 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.310 6.310 3 C -0.008 4.008 4 C -0.129 4.129 5 H 0.117 0.883 6 C -0.182 4.182 7 C 0.013 3.987 8 H 0.125 0.875 9 N -0.363 5.363 10 C 0.310 3.690 11 O -0.412 6.412 12 C -0.181 4.181 13 C -0.002 4.002 14 O -0.230 6.230 15 C 0.092 3.908 16 C -0.221 4.221 17 C -0.092 4.092 18 C -0.112 4.112 19 C -0.180 4.180 20 O -0.344 6.344 21 Si 0.582 3.418 22 C -0.071 4.071 23 C -0.169 4.169 24 C -0.176 4.176 25 H 0.060 0.940 26 H 0.105 0.895 27 H 0.060 0.940 28 H 0.069 0.931 29 H 0.070 0.930 30 H 0.111 0.889 31 H 0.093 0.907 32 H 0.239 0.761 33 H 0.126 0.874 34 H 0.126 0.874 35 H 0.091 0.909 36 H 0.092 0.908 37 H 0.153 0.847 38 H 0.146 0.854 39 H 0.093 0.907 40 H 0.226 0.774 41 H -0.187 1.187 42 H -0.181 1.181 43 H 0.149 0.851 44 H 0.152 0.848 45 H 0.097 0.903 46 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -2.421 3.112 2.459 4.646 hybrid contribution 0.235 -0.910 0.172 0.955 sum -2.186 2.202 2.631 4.068 Atomic orbital electron populations 1.22763 0.80782 1.03010 1.00053 1.87891 1.19871 1.27855 1.95418 1.22562 0.92980 0.84917 1.00303 1.22615 0.93242 0.98302 0.98711 0.88301 1.23481 0.97070 1.01041 0.96594 1.21839 0.85290 0.95084 0.96480 0.87538 1.45623 1.11482 1.56516 1.22661 1.20305 0.83464 0.79910 0.85318 1.90754 1.83154 1.46784 1.20531 1.21468 0.92520 1.03264 1.00884 1.22424 0.84167 0.97394 0.96222 1.85969 1.19423 1.72065 1.45520 1.18975 0.85999 0.95354 0.90483 1.21241 0.99796 1.05573 0.95443 1.20783 0.91837 0.97588 0.98943 1.19134 0.94417 1.01968 0.95700 1.24716 0.97350 0.89293 1.06629 1.86600 1.47724 1.24957 1.75117 0.95083 0.80640 0.88743 0.77376 1.20803 0.97097 0.96069 0.93109 1.20473 0.91274 1.03237 1.01929 1.23338 0.96999 0.97187 1.00052 0.93989 0.89471 0.93994 0.93101 0.92995 0.88940 0.90714 0.76129 0.87361 0.87401 0.90895 0.90757 0.84723 0.85351 0.90708 0.77375 1.18684 1.18064 0.85071 0.84834 0.90286 0.88320 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.09 16 2 O -0.39 -0.63 10.70 -35.23 -0.38 -1.01 16 3 C 0.07 -0.05 5.78 37.16 0.21 0.16 16 4 C -0.11 0.18 3.89 -89.81 -0.35 -0.17 16 5 H 0.10 -0.15 8.14 -51.93 -0.42 -0.57 16 6 C -0.14 0.11 7.43 -25.92 -0.19 -0.08 16 7 C 0.12 -0.13 4.32 -67.12 -0.29 -0.42 16 8 H 0.11 0.05 7.46 -51.93 -0.39 -0.33 16 9 N -0.71 1.19 5.26 -53.02 -0.28 0.91 16 10 C 0.52 0.21 7.83 -10.98 -0.09 0.13 16 11 O -0.54 -2.35 15.58 5.56 0.09 -2.26 16 12 C -0.14 0.24 6.07 -27.88 -0.17 0.07 16 13 C 0.07 0.04 4.03 37.16 0.15 0.19 16 14 O -0.32 -0.64 10.14 -19.43 -0.20 -0.83 16 15 C 0.14 0.36 6.69 -39.22 -0.26 0.10 16 16 C -0.20 -0.42 9.04 -39.43 -0.36 -0.78 16 17 C -0.07 -0.14 8.66 -39.60 -0.34 -0.48 16 18 C -0.11 -0.25 5.38 -104.60 -0.56 -0.81 16 19 C -0.07 -0.05 2.79 36.01 0.10 0.05 16 20 O -0.54 -1.04 12.81 -35.23 -0.45 -1.49 16 21 Si 0.68 -0.05 29.85 -169.99 -5.07 -5.12 16 22 C -0.05 -0.11 9.68 -39.61 -0.38 -0.49 16 23 C -0.15 -0.32 9.99 -39.43 -0.39 -0.72 16 24 C -0.14 0.38 7.39 -25.92 -0.19 0.19 16 25 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 26 H 0.09 -0.12 8.14 -51.93 -0.42 -0.55 16 27 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 28 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 29 H 0.05 -0.07 7.84 -51.93 -0.41 -0.48 16 30 H 0.09 -0.09 7.90 -51.92 -0.41 -0.50 16 31 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 32 H 0.40 -1.67 8.70 -40.82 -0.36 -2.03 16 33 H 0.11 -0.35 8.14 -51.93 -0.42 -0.78 16 34 H 0.11 -0.31 8.14 -51.93 -0.42 -0.74 16 35 H 0.07 0.08 7.61 -51.93 -0.40 -0.32 16 36 H 0.07 0.04 7.63 -51.93 -0.40 -0.35 16 37 H 0.13 0.11 6.30 -52.48 -0.33 -0.22 16 38 H 0.13 0.04 4.86 -52.49 -0.26 -0.22 16 39 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 40 H 0.38 -0.80 8.74 45.56 0.40 -0.40 16 41 H -0.26 -0.46 7.11 56.52 0.40 -0.06 16 42 H -0.26 -0.80 7.05 56.52 0.40 -0.41 16 43 H 0.13 0.09 8.06 -52.48 -0.42 -0.33 16 44 H 0.13 0.10 8.06 -52.49 -0.42 -0.33 16 45 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 46 H 0.10 -0.34 8.10 -51.93 -0.42 -0.76 16 LS Contribution 380.96 15.07 5.74 5.74 Total: 0.00 -8.67 380.96 -9.78 -18.45 By element: Atomic # 1 Polarization: -5.18 SS G_CDS: -7.22 Total: -12.40 kcal Atomic # 6 Polarization: 0.03 SS G_CDS: -2.00 Total: -1.97 kcal Atomic # 7 Polarization: 1.19 SS G_CDS: -0.28 Total: 0.91 kcal Atomic # 8 Polarization: -4.66 SS G_CDS: -0.94 Total: -5.60 kcal Atomic # 14 Polarization: -0.05 SS G_CDS: -5.07 Total: -5.12 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -8.67 -9.78 -18.45 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_4549602.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -79.144 kcal (2) G-P(sol) polarization free energy of solvation -8.672 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.816 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.777 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.449 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.594 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds