Wall clock time and date at job start Tue Mar 9 2021 13:12:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42899 * 113.99629 * 2 1 4 4 C 1.53009 * 109.47113 * 180.02562 * 3 2 1 5 5 H 1.08994 * 112.84524 * 314.67030 * 4 3 2 6 6 C 1.53778 * 113.61149 * 85.86222 * 4 3 2 7 7 C 1.53961 * 87.01656 * 139.95498 * 6 4 3 8 8 H 1.09008 * 113.74057 * 220.05674 * 7 6 4 9 9 N 1.46490 * 113.53858 * 89.18654 * 7 6 4 10 10 C 1.34785 * 120.00354 * 107.50337 * 9 7 6 11 11 O 1.21277 * 119.99238 * 0.02562 * 10 9 7 12 12 C 1.50695 * 120.00275 * 179.97438 * 10 9 7 13 13 C 1.52999 * 109.47105 * 180.02562 * 12 10 9 14 14 C 1.52997 * 109.47318 * 179.97438 * 13 12 10 15 15 O 1.42899 * 109.47262 * 179.97438 * 14 13 12 16 16 C 1.35900 * 117.00024 * 180.02562 * 15 14 13 17 17 C 1.38704 * 120.05772 * 180.02562 * 16 15 14 18 18 C 1.38167 * 119.94554 * 180.02562 * 17 16 15 19 19 C 1.50707 * 119.96901 * 180.02562 * 18 17 16 20 20 O 1.42898 * 109.47447 * 299.99845 * 19 18 17 21 21 Si 1.86300 * 109.46848 * 180.02562 * 19 18 17 22 22 C 1.38233 * 120.05743 * 0.02562 * 18 17 16 23 23 C 1.38286 * 120.11278 * 0.02562 * 22 18 17 24 24 C 1.38127 * 120.05280 * 359.68462 * 23 22 18 25 25 C 1.53781 * 87.11091 * 334.63443 * 7 6 4 26 26 H 1.09002 * 109.47382 * 59.99956 * 1 2 3 27 27 H 1.09001 * 109.46938 * 299.99942 * 1 2 3 28 28 H 1.09004 * 109.46926 * 180.02562 * 1 2 3 29 29 H 1.09007 * 109.47484 * 299.99646 * 3 2 1 30 30 H 1.09004 * 109.47459 * 59.99983 * 3 2 1 31 31 H 1.09001 * 113.61397 * 254.52648 * 6 4 3 32 32 H 1.08997 * 113.61951 * 25.43602 * 6 4 3 33 33 H 0.97005 * 120.00584 * 287.50447 * 9 7 6 34 34 H 1.09003 * 109.47028 * 300.00504 * 12 10 9 35 35 H 1.09000 * 109.47412 * 60.00353 * 12 10 9 36 36 H 1.08996 * 109.47302 * 300.00445 * 13 12 10 37 37 H 1.09007 * 109.46942 * 60.00184 * 13 12 10 38 38 H 1.08996 * 109.47477 * 300.00558 * 14 13 12 39 39 H 1.09007 * 109.46784 * 60.00307 * 14 13 12 40 40 H 1.08001 * 120.02807 * 359.97438 * 17 16 15 41 41 H 1.08996 * 109.47123 * 60.00641 * 19 18 17 42 42 H 0.96697 * 113.99965 * 300.00884 * 20 19 18 43 43 H 1.48491 * 110.00272 * 58.67880 * 21 19 18 44 44 H 1.48502 * 110.00295 * 180.02562 * 21 19 18 45 45 H 1.08005 * 119.94521 * 179.97438 * 22 18 17 46 46 H 1.08000 * 119.97688 * 179.97438 * 23 22 18 47 47 H 1.08003 * 120.03050 * 180.32559 * 24 23 22 48 48 H 1.09000 * 113.61456 * 270.81778 * 25 7 6 49 49 H 1.08998 * 113.69101 * 139.91846 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5355 1.1848 -0.0006 5 1 3.9019 0.4473 0.7134 6 6 4.1409 1.0351 -1.4063 7 6 5.2652 1.9752 -0.9345 8 1 5.5761 2.6998 -1.6872 9 7 6.3946 1.2739 -0.3192 10 6 7.5655 1.1727 -0.9792 11 8 7.6840 1.6627 -2.0822 12 6 8.7275 0.4518 -0.3460 13 6 9.9257 0.4818 -1.2969 14 6 11.1056 -0.2496 -0.6538 15 8 12.2245 -0.2221 -1.5423 16 6 13.3628 -0.8329 -1.1201 17 6 14.4875 -0.8438 -1.9318 18 6 15.6433 -1.4660 -1.5004 19 6 16.8658 -1.4776 -2.3816 20 8 16.5590 -2.1341 -3.6133 21 14 18.2438 -2.3882 -1.5198 22 6 15.6793 -2.0776 -0.2613 23 6 14.5590 -2.0691 0.5494 24 6 13.4030 -1.4433 0.1253 25 6 4.2606 2.5382 0.0846 26 1 -0.3634 0.5138 -0.8900 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 1.6886 1.8464 -0.8900 30 1 1.6885 1.8464 0.8900 31 1 4.4811 0.0239 -1.6297 32 1 3.5206 1.4583 -2.1963 33 1 6.2999 0.8822 0.5632 34 1 8.9940 0.9436 0.5895 35 1 8.4479 -0.5826 -0.1458 36 1 9.6593 -0.0098 -2.2326 37 1 10.2051 1.5163 -1.4967 38 1 11.3718 0.2423 0.2817 39 1 10.8264 -1.2842 -0.4538 40 1 14.4595 -0.3672 -2.9005 41 1 17.1777 -0.4530 -2.5839 42 1 16.2734 -3.0521 -3.5092 43 1 17.8192 -3.7771 -1.2104 44 1 19.4554 -2.4063 -2.3782 45 1 16.5836 -2.5638 0.0739 46 1 14.5895 -2.5480 1.5169 47 1 12.5299 -1.4324 0.7610 48 1 3.6729 3.3731 -0.2971 49 1 4.6959 2.7394 1.0634 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535612_4549616.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:33 Heat of formation + Delta-G solvation = -105.921878 kcal Electronic energy + Delta-G solvation = -27406.345970 eV Core-core repulsion = 23301.120800 eV Total energy + Delta-G solvation = -4105.225170 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.182 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -41.43206 -41.20173 -39.81904 -39.15186 -38.24857 -37.34955 -34.91560 -34.38972 -32.44718 -31.25001 -29.91369 -28.34384 -27.04475 -26.81429 -26.62989 -24.10781 -23.65237 -23.17943 -21.91222 -21.52788 -20.33078 -19.20514 -18.29391 -17.84149 -17.52039 -17.45224 -17.19716 -17.06902 -16.85356 -16.77349 -16.45463 -16.27621 -16.09090 -15.48501 -15.38089 -14.92304 -14.81949 -14.60679 -14.35009 -14.14501 -14.03824 -13.84649 -13.57176 -13.35024 -13.31515 -13.03749 -12.90666 -12.73416 -12.45657 -12.38945 -12.27310 -11.93082 -11.90054 -11.66590 -11.63776 -11.53320 -11.36033 -10.89658 -10.64763 -10.62673 -10.08822 -9.89607 -9.20421 -4.93416 0.23766 0.44582 1.29231 1.59450 1.62699 1.85157 1.98862 2.32130 2.68950 2.70244 3.36851 3.39596 3.50281 3.52997 3.65020 3.72699 3.79867 3.81129 3.86313 3.90391 4.02751 4.13098 4.17853 4.22389 4.23179 4.25880 4.28796 4.35099 4.40325 4.44471 4.47421 4.50310 4.58410 4.59738 4.64094 4.67504 4.72754 4.77352 4.95521 4.98303 4.99733 5.00522 5.09350 5.16534 5.30722 5.39855 5.46853 5.53537 5.72535 6.14799 6.41217 6.42945 6.44115 7.18585 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.391 6.391 3 C 0.069 3.931 4 C -0.110 4.110 5 H 0.098 0.902 6 C -0.143 4.143 7 C 0.118 3.882 8 H 0.106 0.894 9 N -0.715 5.715 10 C 0.517 3.483 11 O -0.532 6.532 12 C -0.138 4.138 13 C -0.105 4.105 14 C 0.060 3.940 15 O -0.311 6.311 16 C 0.132 3.868 17 C -0.126 4.126 18 C -0.079 4.079 19 C -0.077 4.077 20 O -0.528 6.528 21 Si 0.689 3.311 22 C -0.156 4.156 23 C -0.074 4.074 24 C -0.205 4.205 25 C -0.138 4.138 26 H 0.042 0.958 27 H 0.041 0.959 28 H 0.087 0.913 29 H 0.052 0.948 30 H 0.051 0.949 31 H 0.074 0.926 32 H 0.091 0.909 33 H 0.402 0.598 34 H 0.099 0.901 35 H 0.099 0.901 36 H 0.083 0.917 37 H 0.084 0.916 38 H 0.065 0.935 39 H 0.064 0.936 40 H 0.134 0.866 41 H 0.120 0.880 42 H 0.376 0.624 43 H -0.260 1.260 44 H -0.257 1.257 45 H 0.129 0.871 46 H 0.130 0.870 47 H 0.130 0.870 48 H 0.098 0.902 49 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.864 0.145 7.439 7.972 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.310 6.310 3 C -0.008 4.008 4 C -0.128 4.128 5 H 0.116 0.884 6 C -0.182 4.182 7 C 0.013 3.987 8 H 0.124 0.876 9 N -0.367 5.367 10 C 0.304 3.696 11 O -0.408 6.408 12 C -0.178 4.178 13 C -0.143 4.143 14 C -0.016 4.016 15 O -0.225 6.225 16 C 0.087 3.913 17 C -0.145 4.145 18 C -0.080 4.080 19 C -0.186 4.186 20 O -0.334 6.334 21 Si 0.590 3.410 22 C -0.174 4.174 23 C -0.092 4.092 24 C -0.224 4.224 25 C -0.176 4.176 26 H 0.060 0.940 27 H 0.060 0.940 28 H 0.105 0.895 29 H 0.070 0.930 30 H 0.069 0.931 31 H 0.093 0.907 32 H 0.110 0.890 33 H 0.236 0.764 34 H 0.117 0.883 35 H 0.117 0.883 36 H 0.102 0.898 37 H 0.102 0.898 38 H 0.083 0.917 39 H 0.082 0.918 40 H 0.152 0.848 41 H 0.138 0.862 42 H 0.224 0.776 43 H -0.185 1.185 44 H -0.182 1.182 45 H 0.146 0.854 46 H 0.148 0.852 47 H 0.147 0.853 48 H 0.116 0.884 49 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -1.989 0.348 6.174 6.496 hybrid contribution -1.318 -0.751 0.100 1.521 sum -3.307 -0.404 6.274 7.104 Atomic orbital electron populations 1.22766 0.80785 1.03001 1.00060 1.87888 1.19867 1.27865 1.95419 1.22565 0.93006 0.84902 1.00296 1.22608 0.93203 0.98214 0.98812 0.88388 1.23501 0.97117 1.00947 0.96596 1.21863 0.85354 0.95104 0.96396 0.87628 1.45691 1.11705 1.57959 1.21314 1.20586 0.83535 0.79764 0.85764 1.90753 1.83047 1.47123 1.19872 1.21528 0.93533 1.02304 1.00399 1.21231 0.91144 1.02815 0.99139 1.22824 0.85083 1.00807 0.92841 1.86087 1.19282 1.72315 1.44797 1.19023 0.86558 0.92867 0.92874 1.20274 0.90497 1.03092 1.00631 1.20084 0.95403 0.97377 0.95095 1.25095 1.00734 1.04066 0.88750 1.86610 1.88348 1.29882 1.28592 0.94918 0.77567 0.81950 0.86548 1.20913 0.98875 1.02855 0.94728 1.20908 0.91944 0.96952 0.99368 1.21321 1.00370 1.04100 0.96586 1.23329 0.97080 0.97040 1.00128 0.93972 0.94007 0.89474 0.92996 0.93123 0.90749 0.89006 0.76360 0.88292 0.88311 0.89786 0.89753 0.91712 0.91799 0.84793 0.86188 0.77611 1.18504 1.18216 0.85406 0.85222 0.85258 0.88385 0.90348 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 11.01 101.05 1.11 1.09 16 2 O -0.39 -0.64 10.70 -35.23 -0.38 -1.02 16 3 C 0.07 -0.05 5.76 37.16 0.21 0.17 16 4 C -0.11 0.17 3.88 -89.80 -0.35 -0.18 16 5 H 0.10 -0.15 8.14 -51.93 -0.42 -0.57 16 6 C -0.14 0.07 7.44 -25.83 -0.19 -0.12 16 7 C 0.12 -0.09 4.33 -67.03 -0.29 -0.38 16 8 H 0.11 0.12 7.46 -51.92 -0.39 -0.27 16 9 N -0.71 1.08 5.26 -52.93 -0.28 0.80 16 10 C 0.52 0.33 7.83 -10.98 -0.09 0.25 16 11 O -0.53 -2.81 15.58 5.56 0.09 -2.72 16 12 C -0.14 0.36 5.70 -27.89 -0.16 0.20 16 13 C -0.11 0.03 4.87 -26.73 -0.13 -0.10 16 14 C 0.06 -0.05 4.74 37.16 0.18 0.13 16 15 O -0.31 -0.79 10.14 -19.43 -0.20 -0.99 16 16 C 0.13 0.29 6.69 -39.22 -0.26 0.03 16 17 C -0.13 -0.31 9.55 -39.44 -0.38 -0.68 16 18 C -0.08 -0.08 5.39 -104.65 -0.56 -0.65 16 19 C -0.08 -0.04 2.82 36.01 0.10 0.07 16 20 O -0.53 -1.07 12.77 -35.23 -0.45 -1.52 16 21 Si 0.69 -0.44 29.78 -169.99 -5.06 -5.50 16 22 C -0.16 0.00 8.67 -39.57 -0.34 -0.35 16 23 C -0.07 0.02 10.04 -39.60 -0.40 -0.38 16 24 C -0.21 -0.08 9.04 -39.43 -0.36 -0.44 16 25 C -0.14 0.35 7.39 -25.92 -0.19 0.16 16 26 H 0.04 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 28 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 29 H 0.05 -0.06 7.87 -51.93 -0.41 -0.47 16 30 H 0.05 -0.07 8.14 -51.93 -0.42 -0.50 16 31 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 32 H 0.09 -0.06 7.92 -51.93 -0.41 -0.47 16 33 H 0.40 -1.68 8.70 -40.82 -0.36 -2.04 16 34 H 0.10 -0.47 8.14 -51.93 -0.42 -0.89 16 35 H 0.10 -0.44 8.14 -51.93 -0.42 -0.87 16 36 H 0.08 0.12 8.10 -51.93 -0.42 -0.30 16 37 H 0.08 0.10 8.10 -51.93 -0.42 -0.32 16 38 H 0.06 -0.15 7.65 -51.93 -0.40 -0.55 16 39 H 0.06 -0.14 7.67 -51.93 -0.40 -0.53 16 40 H 0.13 0.37 8.06 -52.49 -0.42 -0.05 16 41 H 0.12 -0.03 7.96 -51.93 -0.41 -0.44 16 42 H 0.38 -0.31 8.70 45.56 0.40 0.09 16 43 H -0.26 -0.33 7.11 56.52 0.40 0.07 16 44 H -0.26 -0.68 7.11 56.52 0.40 -0.28 16 45 H 0.13 -0.23 4.87 -52.48 -0.26 -0.49 16 46 H 0.13 -0.33 8.06 -52.49 -0.42 -0.75 16 47 H 0.13 -0.22 6.30 -52.48 -0.33 -0.55 16 48 H 0.10 -0.31 8.10 -51.93 -0.42 -0.73 16 49 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 LS Contribution 402.40 15.07 6.06 6.06 Total: 0.00 -9.15 402.40 -10.38 -19.53 By element: Atomic # 1 Polarization: -5.39 SS G_CDS: -8.07 Total: -13.46 kcal Atomic # 6 Polarization: 0.92 SS G_CDS: -2.09 Total: -1.18 kcal Atomic # 7 Polarization: 1.08 SS G_CDS: -0.28 Total: 0.80 kcal Atomic # 8 Polarization: -5.31 SS G_CDS: -0.94 Total: -6.25 kcal Atomic # 14 Polarization: -0.44 SS G_CDS: -5.06 Total: -5.50 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -9.15 -10.38 -19.53 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_4549616.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.391 kcal (2) G-P(sol) polarization free energy of solvation -9.152 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.543 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.379 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.531 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.922 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds