Wall clock time and date at job start Tue Mar 9 2021 13:12:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42890 * 113.99785 * 2 1 4 4 C 1.53006 * 109.46719 * 180.02562 * 3 2 1 5 5 H 1.08994 * 112.85313 * 43.80460 * 4 3 2 6 6 C 1.53782 * 113.61399 * 175.00354 * 4 3 2 7 7 C 1.53782 * 87.08547 * 139.97927 * 6 4 3 8 8 H 1.09002 * 113.61191 * 219.93665 * 7 6 4 9 9 N 1.46493 * 113.61276 * 89.11485 * 7 6 4 10 10 C 1.34780 * 120.00090 * 156.53642 * 9 7 6 11 11 O 1.21280 * 119.99322 * 359.97438 * 10 9 7 12 12 C 1.50701 * 120.00044 * 179.97438 * 10 9 7 13 13 O 1.42900 * 109.46721 * 179.97438 * 12 10 9 14 14 C 1.35993 * 116.99644 * 179.97438 * 13 12 10 15 15 C 1.39154 * 120.07187 * 179.97438 * 14 13 12 16 16 O 1.35996 * 120.07410 * 0.04929 * 15 14 13 17 17 C 1.42901 * 116.99936 * 179.97438 * 16 15 14 18 18 C 1.38565 * 119.85471 * 180.02562 * 15 14 13 19 19 C 1.38243 * 119.99788 * 359.97438 * 18 15 14 20 20 C 1.50709 * 119.92364 * 180.02562 * 19 18 15 21 21 O 1.42902 * 109.46840 * 255.00008 * 20 19 18 22 22 Si 1.86299 * 109.47201 * 15.00371 * 20 19 18 23 23 C 1.38249 * 120.14768 * 0.02562 * 19 18 15 24 24 N 1.48004 * 119.92435 * 179.97438 * 23 19 18 25 25 O 1.21800 * 119.99783 * 179.97438 * 24 23 19 26 26 O 1.21800 * 120.00594 * 0.02562 * 24 23 19 27 27 C 1.38236 * 120.14650 * 0.02562 * 23 19 18 28 28 C 1.53782 * 87.16745 * 334.52354 * 7 6 4 29 29 H 1.08997 * 109.47477 * 60.00025 * 1 2 3 30 30 H 1.09006 * 109.47441 * 179.97438 * 1 2 3 31 31 H 1.09000 * 109.47185 * 299.99946 * 1 2 3 32 32 H 1.09000 * 109.47450 * 60.00576 * 3 2 1 33 33 H 1.08998 * 109.47796 * 299.99789 * 3 2 1 34 34 H 1.09007 * 113.61543 * 25.42921 * 6 4 3 35 35 H 1.08999 * 113.61458 * 254.53102 * 6 4 3 36 36 H 0.97006 * 119.99893 * 336.52854 * 9 7 6 37 37 H 1.09003 * 109.47203 * 59.99506 * 12 10 9 38 38 H 1.08997 * 109.46786 * 299.99231 * 12 10 9 39 39 H 1.08999 * 109.46682 * 179.97438 * 17 16 15 40 40 H 1.08997 * 109.47532 * 299.99717 * 17 16 15 41 41 H 1.09004 * 109.46858 * 60.00214 * 17 16 15 42 42 H 1.08000 * 120.00430 * 179.73061 * 18 15 14 43 43 H 1.08997 * 109.47032 * 135.00425 * 20 19 18 44 44 H 0.96705 * 113.99656 * 180.02562 * 21 20 19 45 45 H 1.48496 * 109.99770 * 178.68124 * 22 20 19 46 46 H 1.48501 * 109.99617 * 299.99816 * 22 20 19 47 47 H 1.08002 * 119.99984 * 180.02562 * 27 23 19 48 48 H 1.09003 * 113.60994 * 140.02612 * 28 7 6 49 49 H 1.08995 * 113.61370 * 270.92118 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3054 0.0000 4 6 3.5354 1.1845 -0.0006 5 1 3.8998 0.4286 -0.6962 6 6 4.2603 2.5352 -0.1234 7 6 5.2679 1.9991 0.9072 8 1 5.5809 2.7432 1.6397 9 7 6.3955 1.2818 0.3073 10 6 7.5585 1.1714 0.9795 11 8 7.6714 1.6663 2.0809 12 6 8.7183 0.4330 0.3625 13 8 9.8287 0.4539 1.2617 14 6 10.9645 -0.1736 0.8547 15 6 12.0849 -0.1920 1.6798 16 8 12.0461 0.4165 2.8955 17 6 13.2330 0.3568 3.6890 18 6 13.2400 -0.8322 1.2604 19 6 13.2775 -1.4511 0.0248 20 6 14.5345 -2.1473 -0.4295 21 8 15.1926 -1.3476 -1.4141 22 14 15.6681 -2.3958 1.0279 23 6 12.1644 -1.4328 -0.7950 24 7 12.2101 -2.0965 -2.1170 25 8 11.2301 -2.0815 -2.8402 26 8 13.2274 -2.6584 -2.4816 27 6 11.0092 -0.7950 -0.3830 28 6 4.1464 1.0743 1.4092 29 1 -0.3634 0.5138 -0.8899 30 1 -0.3634 -1.0277 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 1.6886 1.8463 0.8900 33 1 1.6886 1.8464 -0.8899 34 1 3.6738 3.3800 0.2379 35 1 4.6940 2.7100 -1.1080 36 1 6.3052 0.8862 -0.5738 37 1 8.9999 0.9157 -0.5734 38 1 8.4287 -0.5993 0.1662 39 1 13.0671 0.8800 4.6307 40 1 13.4834 -0.6847 3.8907 41 1 14.0542 0.8302 3.1506 42 1 14.1124 -0.8442 1.8970 43 1 14.2783 -3.1155 -0.8598 44 1 16.0113 -1.7354 -1.7526 45 1 16.8975 -3.1098 0.5990 46 1 16.0248 -1.0830 1.6234 47 1 10.1409 -0.7825 -1.0251 48 1 4.4883 0.0705 1.6613 49 1 3.5289 1.5204 2.1888 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16535612_4549636.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:47 Heat of formation + Delta-G solvation = -110.983672 kcal Electronic energy + Delta-G solvation = -35528.964091 eV Core-core repulsion = 30429.358416 eV Total energy + Delta-G solvation = -5099.605674 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.160 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -43.40717 -42.13664 -41.41635 -40.22041 -39.39642 -39.08336 -38.19760 -37.76267 -37.24311 -34.62487 -32.77974 -32.57619 -30.43949 -29.24043 -28.73003 -27.92498 -26.95123 -26.60335 -25.79024 -24.12617 -23.47638 -23.08539 -22.07720 -20.77522 -20.30844 -19.87490 -19.46772 -18.92077 -18.68822 -18.36432 -18.04585 -17.78379 -17.72663 -17.36060 -17.04446 -16.83276 -16.74933 -16.48680 -16.28781 -15.92960 -15.67736 -15.60521 -15.30404 -14.80679 -14.71831 -14.37551 -14.19076 -14.05277 -13.90063 -13.71671 -13.50964 -13.44313 -12.93879 -12.83904 -12.68945 -12.58733 -12.41896 -12.39667 -12.37129 -12.32594 -12.19048 -11.91529 -11.82631 -11.59992 -11.29477 -11.11935 -10.59237 -10.48944 -10.41608 -10.18804 -9.50576 -5.01465 -1.34116 -0.44630 0.17521 0.29882 1.13501 1.21256 1.35313 1.51737 1.82883 1.86385 1.89574 2.31359 2.79808 2.89474 3.14186 3.28522 3.43609 3.45550 3.49850 3.60360 3.60862 3.79366 3.85123 3.92265 3.96255 3.96722 4.03112 4.12340 4.18306 4.29685 4.35192 4.36875 4.39551 4.47678 4.60042 4.60181 4.62608 4.69219 4.70450 4.74863 4.75738 4.82194 4.85326 5.01219 5.08417 5.14934 5.26552 5.49818 5.58536 6.02491 6.23676 6.36280 6.50316 6.51711 7.04983 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.417 6.417 3 C 0.064 3.936 4 C -0.105 4.105 5 H 0.102 0.898 6 C -0.121 4.121 7 C 0.114 3.886 8 H 0.087 0.913 9 N -0.693 5.693 10 C 0.519 3.481 11 O -0.565 6.565 12 C 0.027 3.973 13 O -0.290 6.290 14 C 0.102 3.898 15 C 0.168 3.832 16 O -0.306 6.306 17 C 0.000 4.000 18 C -0.173 4.173 19 C 0.003 3.997 20 C -0.106 4.106 21 O -0.546 6.546 22 Si 0.769 3.231 23 C -0.045 4.045 24 N 0.038 4.962 25 O -0.191 6.191 26 O -0.156 6.156 27 C -0.109 4.109 28 C -0.145 4.145 29 H 0.050 0.950 30 H 0.090 0.910 31 H 0.047 0.953 32 H 0.056 0.944 33 H 0.061 0.939 34 H 0.109 0.891 35 H 0.094 0.906 36 H 0.421 0.579 37 H 0.129 0.871 38 H 0.130 0.870 39 H 0.125 0.875 40 H 0.090 0.910 41 H 0.070 0.930 42 H 0.183 0.817 43 H 0.102 0.898 44 H 0.400 0.600 45 H -0.277 1.277 46 H -0.269 1.269 47 H 0.186 0.814 48 H 0.060 0.940 49 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.609 -0.341 1.853 2.478 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.337 6.337 3 C -0.012 4.012 4 C -0.123 4.123 5 H 0.120 0.880 6 C -0.158 4.158 7 C 0.009 3.991 8 H 0.105 0.895 9 N -0.347 5.347 10 C 0.305 3.695 11 O -0.443 6.443 12 C -0.051 4.051 13 O -0.203 6.203 14 C 0.055 3.945 15 C 0.119 3.881 16 O -0.217 6.217 17 C -0.094 4.094 18 C -0.191 4.191 19 C 0.002 3.998 20 C -0.212 4.212 21 O -0.357 6.357 22 Si 0.670 3.330 23 C -0.129 4.129 24 N 0.552 4.448 25 O -0.400 6.400 26 O -0.373 6.373 27 C -0.129 4.129 28 C -0.184 4.184 29 H 0.068 0.932 30 H 0.109 0.891 31 H 0.066 0.934 32 H 0.074 0.926 33 H 0.079 0.921 34 H 0.127 0.873 35 H 0.112 0.888 36 H 0.259 0.741 37 H 0.146 0.854 38 H 0.148 0.852 39 H 0.143 0.857 40 H 0.108 0.892 41 H 0.088 0.912 42 H 0.200 0.800 43 H 0.120 0.880 44 H 0.252 0.748 45 H -0.203 1.203 46 H -0.195 1.195 47 H 0.203 0.797 48 H 0.079 0.921 49 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -1.411 0.944 3.979 4.326 hybrid contribution 0.324 -0.092 -2.082 2.109 sum -1.087 0.851 1.897 2.347 Atomic orbital electron populations 1.22877 0.79926 1.03534 1.00728 1.87847 1.21020 1.29239 1.95584 1.22687 0.93252 0.84283 1.00976 1.22641 0.92937 0.98977 0.97763 0.88018 1.23275 0.95675 0.96869 1.00022 1.21858 0.85207 0.94861 0.97165 0.89514 1.45364 1.10881 1.56595 1.21836 1.20315 0.84056 0.79842 0.85288 1.90779 1.83261 1.48484 1.21749 1.22915 0.84292 1.04211 0.93658 1.86298 1.19121 1.71152 1.43697 1.17919 0.86820 0.97755 0.92037 1.18638 0.91344 0.91964 0.86124 1.86320 1.40497 1.69949 1.24968 1.23739 0.85007 1.05034 0.95573 1.21163 0.98869 1.01761 0.97353 1.19115 0.93330 0.94996 0.92399 1.25408 0.96533 0.96805 1.02489 1.86479 1.42969 1.48514 1.57746 0.94350 0.78466 0.80909 0.79302 1.20537 0.98430 1.08385 0.85552 1.43556 0.99823 0.98841 1.02587 1.94516 1.26971 1.65883 1.52586 1.94480 1.21368 1.43742 1.77693 1.20905 0.99055 0.97218 0.95687 1.23539 0.97236 1.00184 0.97448 0.93166 0.89138 0.93448 0.92605 0.92101 0.87298 0.88754 0.74127 0.85377 0.85207 0.85694 0.89188 0.91155 0.80005 0.88038 0.74825 1.20291 1.19531 0.79669 0.92083 0.88905 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 11.01 113.37 1.25 1.21 16 2 O -0.42 -1.24 10.70 -148.98 -1.59 -2.83 16 3 C 0.06 -0.14 5.78 71.98 0.42 0.27 16 4 C -0.10 0.43 3.90 -10.17 -0.04 0.39 16 5 H 0.10 -0.45 8.14 -2.39 -0.02 -0.47 16 6 C -0.12 0.82 7.38 31.12 0.23 1.05 16 7 C 0.11 -0.22 4.30 45.52 0.20 -0.02 16 8 H 0.09 0.23 7.50 -2.39 -0.02 0.22 16 9 N -0.69 2.55 5.26 -440.04 -2.32 0.23 16 10 C 0.52 1.36 7.91 87.66 0.69 2.05 16 11 O -0.57 -7.81 16.12 16.01 0.26 -7.55 16 12 C 0.03 -0.08 5.22 71.24 0.37 0.29 16 13 O -0.29 -1.40 9.45 -67.06 -0.63 -2.04 16 14 C 0.10 0.27 6.70 22.57 0.15 0.42 16 15 C 0.17 0.35 6.70 22.57 0.15 0.50 16 16 O -0.31 -0.83 10.28 -79.64 -0.82 -1.65 16 17 C 0.00 0.00 9.81 113.37 1.11 1.11 16 18 C -0.17 0.16 7.64 22.35 0.17 0.33 16 19 C 0.00 0.01 5.29 -19.86 -0.11 -0.10 16 20 C -0.11 -0.03 1.73 71.24 0.12 0.09 16 21 O -0.55 -1.76 11.77 -129.62 -1.53 -3.29 16 22 Si 0.77 -3.85 30.20 68.60 2.07 -1.77 16 23 C -0.04 -0.21 6.84 36.38 0.25 0.04 16 24 N 0.04 0.35 4.45 -46.47 -0.21 0.14 16 25 O -0.19 -1.99 18.44 18.89 0.35 -1.64 16 26 O -0.16 -1.64 14.62 25.10 0.37 -1.27 16 27 C -0.11 -0.10 8.54 22.35 0.19 0.09 16 28 C -0.15 0.18 7.45 31.21 0.23 0.41 16 29 H 0.05 -0.18 8.14 -2.39 -0.02 -0.20 16 30 H 0.09 -0.26 8.14 -2.38 -0.02 -0.28 16 31 H 0.05 -0.15 8.14 -2.39 -0.02 -0.16 16 32 H 0.06 -0.18 7.85 -2.39 -0.02 -0.20 16 33 H 0.06 -0.26 8.14 -2.39 -0.02 -0.28 16 34 H 0.11 -0.89 8.10 -2.38 -0.02 -0.91 16 35 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 36 H 0.42 -4.42 8.70 -92.70 -0.81 -5.22 16 37 H 0.13 -1.16 7.67 -2.39 -0.02 -1.18 16 38 H 0.13 -1.20 7.66 -2.39 -0.02 -1.22 16 39 H 0.12 -1.08 8.14 -2.39 -0.02 -1.10 16 40 H 0.09 -0.98 7.67 -2.39 -0.02 -1.00 16 41 H 0.07 -0.54 7.66 -2.38 -0.02 -0.56 16 42 H 0.18 -1.06 3.13 -2.91 -0.01 -1.07 16 43 H 0.10 0.02 6.07 -2.39 -0.01 0.00 16 44 H 0.40 -1.75 8.74 -74.05 -0.65 -2.39 16 45 H -0.28 0.13 7.11 99.48 0.71 0.83 16 46 H -0.27 0.57 6.74 99.48 0.67 1.24 16 47 H 0.19 -0.78 5.85 -2.91 -0.02 -0.79 16 48 H 0.06 0.10 8.14 -2.39 -0.02 0.09 16 49 H 0.09 -0.12 7.90 -2.39 -0.02 -0.14 16 Total: 0.00 -30.13 411.00 0.92 -29.21 By element: Atomic # 1 Polarization: -15.27 SS G_CDS: -0.42 Total: -15.69 kcal Atomic # 6 Polarization: 2.74 SS G_CDS: 5.39 Total: 8.13 kcal Atomic # 7 Polarization: 2.90 SS G_CDS: -2.52 Total: 0.38 kcal Atomic # 8 Polarization: -16.66 SS G_CDS: -3.60 Total: -20.26 kcal Atomic # 14 Polarization: -3.85 SS G_CDS: 2.07 Total: -1.77 kcal Total: -30.13 0.92 -29.21 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_4549636.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.772 kcal (2) G-P(sol) polarization free energy of solvation -30.130 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.902 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.918 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.212 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.984 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds