Wall clock time and date at job start Tue Mar 9 2021 13:12:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42906 * 114.00131 * 2 1 4 4 C 1.52997 * 109.46895 * 179.97438 * 3 2 1 5 5 H 1.08997 * 112.91073 * 43.75005 * 4 3 2 6 6 C 1.53780 * 113.61123 * 174.99658 * 4 3 2 7 7 C 1.53776 * 87.08236 * 139.98463 * 6 4 3 8 8 H 1.09009 * 113.61677 * 219.93932 * 7 6 4 9 9 N 1.46500 * 113.62073 * 89.11630 * 7 6 4 10 10 C 1.34775 * 120.00642 * 155.00138 * 9 7 6 11 11 O 1.21285 * 119.99502 * 359.97438 * 10 9 7 12 12 C 1.50696 * 119.99942 * 180.02562 * 10 9 7 13 13 F 1.39898 * 109.47397 * 60.00368 * 12 10 9 14 14 F 1.39897 * 109.47174 * 299.99341 * 12 10 9 15 15 O 1.42901 * 109.46820 * 180.02562 * 12 10 9 16 16 C 1.35902 * 117.00013 * 179.97438 * 15 12 10 17 17 C 1.38740 * 120.05364 * 179.97438 * 16 15 12 18 18 C 1.38145 * 119.93952 * 180.02562 * 17 16 15 19 19 C 1.38264 * 120.05832 * 359.97438 * 18 17 16 20 20 C 1.50697 * 119.94678 * 180.02562 * 19 18 17 21 21 O 1.42905 * 109.46996 * 64.99368 * 20 19 18 22 22 Si 1.86301 * 109.47403 * 184.99631 * 20 19 18 23 23 C 1.38269 * 120.10972 * 0.28887 * 19 18 17 24 24 C 1.38148 * 120.05578 * 359.45433 * 23 19 18 25 25 C 1.53779 * 113.61768 * 272.49335 * 4 3 2 26 26 H 1.09008 * 109.46744 * 60.00209 * 1 2 3 27 27 H 1.08999 * 109.46980 * 180.02562 * 1 2 3 28 28 H 1.08991 * 109.47590 * 300.00541 * 1 2 3 29 29 H 1.08994 * 109.47033 * 59.99895 * 3 2 1 30 30 H 1.08999 * 109.46715 * 299.99741 * 3 2 1 31 31 H 1.09004 * 113.61679 * 25.43810 * 6 4 3 32 32 H 1.09005 * 113.69574 * 254.54400 * 6 4 3 33 33 H 0.97001 * 119.99376 * 335.00973 * 9 7 6 34 34 H 1.07997 * 120.03023 * 359.97438 * 17 16 15 35 35 H 1.07994 * 119.96654 * 179.97438 * 18 17 16 36 36 H 1.09001 * 109.46613 * 304.99779 * 20 19 18 37 37 H 0.96696 * 114.00036 * 60.00342 * 21 20 19 38 38 H 1.48497 * 109.99842 * 179.97438 * 22 20 19 39 39 H 1.48498 * 109.99736 * 301.31722 * 22 20 19 40 40 H 1.08003 * 119.96834 * 179.70977 * 23 19 18 41 41 H 1.08001 * 120.02819 * 180.24252 * 24 23 19 42 42 H 1.09002 * 113.61317 * 105.46966 * 25 4 3 43 43 H 1.08997 * 113.61475 * 334.57298 * 25 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 3.5354 1.1846 0.0006 5 1 3.9014 0.4280 -0.6933 6 6 4.2604 2.5352 -0.1222 7 6 5.2672 1.9995 0.9094 8 1 5.5797 2.7438 1.6419 9 7 6.3954 1.2819 0.3107 10 6 7.5676 1.1983 0.9705 11 8 7.6885 1.7176 2.0599 12 6 8.7282 0.4606 0.3543 13 9 9.0679 1.0596 -0.8634 14 9 8.3687 -0.8733 0.1337 15 8 9.8488 0.5111 1.2396 16 6 10.9859 -0.1113 0.8317 17 6 12.1124 -0.1012 1.6415 18 6 13.2672 -0.7342 1.2243 19 6 13.3008 -1.3780 0.0011 20 6 14.5617 -2.0683 -0.4513 21 8 14.8448 -3.1635 0.4220 22 14 14.3339 -2.7019 -2.1883 23 6 12.1812 -1.3849 -0.8101 24 6 11.0222 -0.7578 -0.3952 25 6 4.1442 1.0751 1.4086 26 1 -0.3633 0.5138 -0.8901 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5139 0.8898 29 1 1.6886 1.8464 0.8899 30 1 1.6886 1.8463 -0.8900 31 1 3.6737 3.3802 0.2384 32 1 4.6953 2.7111 -1.1062 33 1 6.2987 0.8670 -0.5608 34 1 12.0868 0.4019 2.5968 35 1 14.1444 -0.7262 1.8541 36 1 15.3911 -1.3614 -0.4281 37 1 14.1478 -3.8331 0.4517 38 1 15.5708 -3.3842 -2.6463 39 1 13.1858 -3.6423 -2.2394 40 1 12.2114 -1.8845 -1.7672 41 1 10.1467 -0.7668 -1.0275 42 1 4.4848 0.0706 1.6601 43 1 3.5257 1.5207 2.1876 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16535612_4549640.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:55 Heat of formation + Delta-G solvation = -180.168515 kcal Electronic energy + Delta-G solvation = -30109.911160 eV Core-core repulsion = 25373.633701 eV Total energy + Delta-G solvation = -4736.277459 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.131 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -50.92403 -48.89331 -41.69277 -41.34432 -40.01867 -39.26927 -38.27462 -37.37904 -34.93607 -32.45822 -32.06680 -30.15303 -28.79374 -26.99931 -26.68140 -26.26622 -24.66886 -23.65252 -22.85755 -22.47766 -20.70524 -20.52805 -19.78713 -19.72109 -18.66117 -17.81003 -17.43662 -17.34078 -16.98115 -16.83226 -16.58685 -16.49066 -16.31860 -16.19211 -15.89529 -15.74683 -15.43928 -15.38040 -15.28866 -15.13684 -14.93507 -14.45733 -14.40504 -14.32634 -14.23666 -13.82568 -13.56233 -13.48040 -13.04386 -12.91128 -12.45033 -12.41166 -12.25489 -11.92182 -11.75140 -11.67394 -11.57065 -11.35260 -10.64021 -10.61404 -10.47595 -10.19546 -9.61998 -4.93060 0.00186 0.14592 0.42133 0.58452 1.29445 1.58429 1.64772 1.94554 1.95966 2.43811 2.71752 2.79332 3.18945 3.36778 3.39624 3.52860 3.54584 3.64067 3.70582 3.73440 3.91906 4.08178 4.19204 4.31631 4.37839 4.38617 4.45496 4.52688 4.58567 4.59765 4.60095 4.73978 4.76401 4.82122 4.85441 4.88636 4.93361 4.98613 5.03382 5.04306 5.33165 5.35566 5.40487 5.78962 5.83481 6.24140 6.41590 6.47067 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.419 6.419 3 C 0.065 3.935 4 C -0.110 4.110 5 H 0.098 0.902 6 C -0.118 4.118 7 C 0.108 3.892 8 H 0.105 0.895 9 N -0.670 5.670 10 C 0.519 3.481 11 O -0.506 6.506 12 C 0.435 3.565 13 F -0.168 7.168 14 F -0.172 7.172 15 O -0.305 6.305 16 C 0.086 3.914 17 C -0.136 4.136 18 C -0.057 4.057 19 C -0.138 4.138 20 C -0.078 4.078 21 O -0.547 6.547 22 Si 0.762 3.238 23 C -0.079 4.079 24 C -0.194 4.194 25 C -0.144 4.144 26 H 0.050 0.950 27 H 0.089 0.911 28 H 0.048 0.952 29 H 0.060 0.940 30 H 0.062 0.938 31 H 0.119 0.881 32 H 0.095 0.905 33 H 0.423 0.577 34 H 0.145 0.855 35 H 0.151 0.849 36 H 0.131 0.869 37 H 0.386 0.614 38 H -0.301 1.301 39 H -0.282 1.282 40 H 0.153 0.847 41 H 0.141 0.859 42 H 0.062 0.938 43 H 0.104 0.896 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.563 2.842 -4.698 7.140 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.338 6.338 3 C -0.011 4.011 4 C -0.128 4.128 5 H 0.116 0.884 6 C -0.156 4.156 7 C 0.005 3.995 8 H 0.123 0.877 9 N -0.323 5.323 10 C 0.298 3.702 11 O -0.379 6.379 12 C 0.358 3.642 13 F -0.150 7.150 14 F -0.154 7.154 15 O -0.222 6.222 16 C 0.043 3.957 17 C -0.154 4.154 18 C -0.075 4.075 19 C -0.139 4.139 20 C -0.187 4.187 21 O -0.355 6.355 22 Si 0.668 3.332 23 C -0.096 4.096 24 C -0.212 4.212 25 C -0.182 4.182 26 H 0.069 0.931 27 H 0.107 0.893 28 H 0.067 0.933 29 H 0.078 0.922 30 H 0.080 0.920 31 H 0.137 0.863 32 H 0.113 0.887 33 H 0.261 0.739 34 H 0.163 0.837 35 H 0.169 0.831 36 H 0.149 0.851 37 H 0.236 0.764 38 H -0.229 1.229 39 H -0.208 1.208 40 H 0.170 0.830 41 H 0.159 0.841 42 H 0.080 0.920 43 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -3.897 2.796 -4.194 6.371 hybrid contribution -0.588 -1.145 0.342 1.332 sum -4.485 1.651 -3.851 6.138 Atomic orbital electron populations 1.22872 0.79902 1.03480 1.00784 1.87852 1.21034 1.29334 1.95605 1.22685 0.92948 0.84282 1.01234 1.22636 0.93339 0.99031 0.97803 0.88363 1.23312 0.95231 0.97092 0.99920 1.22170 0.84336 0.95157 0.97870 0.87732 1.45447 1.09602 1.54533 1.22709 1.19379 0.83354 0.81508 0.86001 1.90855 1.81866 1.45120 1.20101 1.21724 0.87433 0.77681 0.77396 1.93200 1.92807 1.83228 1.45728 1.93196 1.91793 1.35918 1.94481 1.86646 1.19372 1.72239 1.43906 1.19258 0.85637 0.95553 0.95267 1.20716 0.90557 1.03233 1.00913 1.21075 0.97236 0.93654 0.95513 1.20414 0.96283 1.01225 0.95953 1.25178 0.97567 0.91152 1.04754 1.86583 1.48568 1.34643 1.65702 0.94095 0.76535 0.85706 0.76867 1.21057 0.91308 0.97513 0.99733 1.21600 1.01333 1.02419 0.95865 1.23530 0.96752 1.00170 0.97779 0.93148 0.89279 0.93335 0.92193 0.91995 0.86270 0.88669 0.73916 0.83713 0.83104 0.85142 0.76450 1.22928 1.20822 0.83022 0.84134 0.91964 0.87792 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 11.01 113.37 1.25 1.19 16 2 O -0.42 -0.90 10.70 -148.98 -1.59 -2.49 16 3 C 0.06 -0.23 5.78 71.98 0.42 0.18 16 4 C -0.11 0.57 3.89 -10.27 -0.04 0.53 16 5 H 0.10 -0.46 8.14 -2.39 -0.02 -0.48 16 6 C -0.12 1.01 7.39 31.12 0.23 1.24 16 7 C 0.11 -0.38 4.32 45.52 0.20 -0.19 16 8 H 0.10 -0.11 7.46 -2.38 -0.02 -0.12 16 9 N -0.67 1.53 5.26 -440.04 -2.32 -0.78 16 10 C 0.52 2.42 7.34 87.66 0.64 3.06 16 11 O -0.51 -6.02 16.10 15.99 0.26 -5.76 16 12 C 0.44 1.90 2.05 71.23 0.15 2.05 16 13 F -0.17 -0.35 15.30 44.97 0.69 0.34 16 14 F -0.17 -0.55 15.29 44.97 0.69 0.13 16 15 O -0.30 -2.64 9.60 -73.41 -0.70 -3.34 16 16 C 0.09 0.54 6.48 22.51 0.15 0.68 16 17 C -0.14 -0.53 9.99 22.37 0.22 -0.31 16 18 C -0.06 -0.07 9.68 22.25 0.22 0.14 16 19 C -0.14 -0.03 5.35 -19.85 -0.11 -0.13 16 20 C -0.08 0.11 2.80 71.23 0.20 0.31 16 21 O -0.55 -1.02 12.83 -148.98 -1.91 -2.93 16 22 Si 0.76 -1.89 29.87 68.60 2.05 0.16 16 23 C -0.08 -0.01 8.66 22.26 0.19 0.18 16 24 C -0.19 -0.63 8.26 22.36 0.18 -0.45 16 25 C -0.14 0.43 7.43 31.12 0.23 0.66 16 26 H 0.05 -0.22 8.14 -2.38 -0.02 -0.24 16 27 H 0.09 -0.30 8.14 -2.39 -0.02 -0.32 16 28 H 0.05 -0.19 8.14 -2.39 -0.02 -0.21 16 29 H 0.06 -0.31 7.84 -2.39 -0.02 -0.33 16 30 H 0.06 -0.35 8.14 -2.39 -0.02 -0.37 16 31 H 0.12 -1.30 8.10 -2.38 -0.02 -1.32 16 32 H 0.09 -0.99 8.14 -2.38 -0.02 -1.01 16 33 H 0.42 -3.08 8.70 -92.71 -0.81 -3.88 16 34 H 0.15 0.31 8.06 -2.91 -0.02 0.29 16 35 H 0.15 -0.23 8.06 -2.91 -0.02 -0.26 16 36 H 0.13 -0.46 7.96 -2.39 -0.02 -0.48 16 37 H 0.39 -1.30 8.70 -74.06 -0.64 -1.94 16 38 H -0.30 -1.59 7.11 99.48 0.71 -0.89 16 39 H -0.28 -0.33 7.01 99.48 0.70 0.37 16 40 H 0.15 -0.63 4.84 -2.91 -0.01 -0.64 16 41 H 0.14 0.21 5.10 -2.91 -0.01 0.20 16 42 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 43 H 0.10 -0.43 7.89 -2.39 -0.02 -0.45 16 Total: 0.00 -18.54 369.21 0.93 -17.61 By element: Atomic # 1 Polarization: -11.72 SS G_CDS: -0.35 Total: -12.08 kcal Atomic # 6 Polarization: 5.02 SS G_CDS: 4.13 Total: 9.15 kcal Atomic # 7 Polarization: 1.53 SS G_CDS: -2.32 Total: -0.78 kcal Atomic # 8 Polarization: -10.58 SS G_CDS: -3.95 Total: -14.54 kcal Atomic # 9 Polarization: -0.90 SS G_CDS: 1.38 Total: 0.48 kcal Atomic # 14 Polarization: -1.89 SS G_CDS: 2.05 Total: 0.16 kcal Total: -18.54 0.93 -17.61 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_4549640.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -162.562 kcal (2) G-P(sol) polarization free energy of solvation -18.537 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -181.099 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.930 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.607 kcal (6) G-S(sol) free energy of system = (1) + (5) -180.169 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds