Wall clock time and date at job start Tue Mar 9 2021 13:13:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42895 * 114.00260 * 2 1 4 4 C 1.53012 * 109.46868 * 179.97438 * 3 2 1 5 5 H 1.08995 * 112.90549 * 316.24755 * 4 3 2 6 6 C 1.54047 * 113.61916 * 87.50681 * 4 3 2 7 7 C 1.53780 * 86.98482 * 139.97250 * 6 4 3 8 8 H 1.09001 * 113.61427 * 219.97329 * 7 6 4 9 9 N 1.46502 * 113.61155 * 89.16133 * 7 6 4 10 10 C 1.34782 * 120.00349 * 105.85807 * 9 7 6 11 11 O 1.21620 * 119.99539 * 0.02562 * 10 9 7 12 12 C 1.47254 * 120.00425 * 179.97438 * 10 9 7 13 13 C 1.36767 * 126.94767 * 180.02562 * 12 10 9 14 14 C 1.50703 * 125.79733 * 359.97438 * 13 12 10 15 15 N 1.34658 * 108.40157 * 180.24828 * 13 12 10 16 16 C 1.36447 * 110.29681 * 359.55531 * 15 13 12 17 17 C 1.50703 * 125.57482 * 180.16261 * 16 15 13 18 18 O 1.42906 * 109.47051 * 245.33223 * 17 16 15 19 19 Si 1.86294 * 109.46749 * 5.32958 * 17 16 15 20 20 C 1.34496 * 108.85531 * 0.44748 * 16 15 13 21 21 C 1.53777 * 87.17424 * 334.57286 * 7 6 4 22 22 H 1.08996 * 109.46412 * 300.00540 * 1 2 3 23 23 H 1.08998 * 109.46364 * 60.00190 * 1 2 3 24 24 H 1.08990 * 109.47340 * 179.97438 * 1 2 3 25 25 H 1.08997 * 109.47334 * 60.00200 * 3 2 1 26 26 H 1.08997 * 109.47370 * 299.99526 * 3 2 1 27 27 H 1.09003 * 113.61245 * 25.47258 * 6 4 3 28 28 H 1.09002 * 113.69606 * 254.49386 * 6 4 3 29 29 H 0.97002 * 119.99879 * 285.86370 * 9 7 6 30 30 H 1.09002 * 109.47152 * 90.00020 * 14 13 12 31 31 H 1.09001 * 109.46980 * 330.00120 * 14 13 12 32 32 H 1.09004 * 109.47113 * 210.00101 * 14 13 12 33 33 H 0.96999 * 124.85098 * 179.70548 * 15 13 12 34 34 H 1.08995 * 109.46940 * 125.33078 * 17 16 15 35 35 H 0.96699 * 113.99894 * 59.99652 * 18 17 16 36 36 H 1.48504 * 109.99981 * 58.68451 * 19 17 16 37 37 H 1.48507 * 110.00050 * 179.97438 * 19 17 16 38 38 H 1.08000 * 126.83304 * 179.73075 * 20 16 15 39 39 H 1.08994 * 113.61837 * 140.02439 * 21 7 6 40 40 H 1.09004 * 113.60749 * 270.83511 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 3.5356 1.1844 0.0006 5 1 3.9009 0.4281 0.6952 6 6 4.1466 1.0742 -1.4092 7 6 5.2680 1.9990 -0.9071 8 1 5.5812 2.7429 -1.6396 9 7 6.3957 1.2816 -0.3071 10 6 7.5587 1.1711 -0.9793 11 8 7.6721 1.6674 -2.0839 12 6 8.6923 0.4505 -0.3761 13 6 9.9286 0.2541 -0.9271 14 6 10.3787 0.7434 -2.2796 15 7 10.6732 -0.4560 -0.0585 16 6 9.9545 -0.7280 1.0690 17 6 10.4554 -1.4986 2.2634 18 8 9.7176 -2.7161 2.3883 19 14 12.2630 -1.8883 2.0373 20 6 8.7240 -0.2013 0.9377 21 6 4.2605 2.5351 0.1235 22 1 -0.3632 0.5139 0.8899 23 1 -0.3632 0.5138 -0.8900 24 1 -0.3633 -1.0276 -0.0005 25 1 1.6887 1.8463 0.8900 26 1 1.6888 1.8463 -0.8900 27 1 3.5291 1.5203 -2.1888 28 1 4.4884 0.0703 -1.6612 29 1 6.3053 0.8860 0.5739 30 1 10.8163 1.7367 -2.1794 31 1 9.5225 0.7897 -2.9526 32 1 11.1228 0.0577 -2.6849 33 1 11.5902 -0.7327 -0.2115 34 1 10.3227 -0.8993 3.1641 35 1 9.7898 -3.3002 1.6210 36 1 13.0371 -0.6315 1.8743 37 1 12.7693 -2.6477 3.2088 38 1 7.9193 -0.2489 1.6565 39 1 4.6942 2.7099 1.1081 40 1 3.6751 3.3808 -0.2373 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16535612_9865296.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:46 Heat of formation + Delta-G solvation = -44.957448 kcal Electronic energy + Delta-G solvation = -21958.311300 eV Core-core repulsion = 18548.287406 eV Total energy + Delta-G solvation = -3410.023894 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.146 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -42.48054 -40.96563 -39.26556 -38.09659 -37.77325 -34.28029 -32.79233 -32.04980 -29.65379 -28.91958 -26.99651 -26.60911 -25.62784 -24.00400 -22.91072 -21.58842 -20.62821 -20.10084 -18.71914 -17.78671 -17.36172 -16.97174 -16.93165 -16.70407 -16.56579 -16.12385 -15.72595 -15.50044 -15.07796 -14.91341 -14.48718 -14.36793 -14.14705 -14.11754 -13.81195 -13.64240 -13.41583 -13.38720 -12.79221 -12.70274 -12.59133 -12.35356 -12.25969 -11.79990 -11.50296 -11.21861 -10.81224 -10.55418 -10.48815 -9.97502 -9.76529 -9.13784 -5.33920 0.79649 1.01288 1.22169 1.38606 1.72822 1.98636 2.44513 2.67209 2.80085 3.29279 3.51447 3.62091 3.64090 3.83728 3.90433 3.99823 4.14468 4.20695 4.33776 4.34525 4.38396 4.43758 4.50416 4.57601 4.60555 4.70675 4.72641 4.76790 4.76961 4.80094 4.89046 5.02873 5.13554 5.14839 5.21792 5.32427 5.70275 5.76507 5.88195 6.24325 6.32569 6.42674 6.74823 7.51656 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.391 6.391 3 C 0.069 3.931 4 C -0.110 4.110 5 H 0.098 0.902 6 C -0.143 4.143 7 C 0.123 3.877 8 H 0.104 0.896 9 N -0.710 5.710 10 C 0.596 3.404 11 O -0.547 6.547 12 C -0.241 4.241 13 C 0.125 3.875 14 C -0.100 4.100 15 N -0.545 5.545 16 C -0.029 4.029 17 C -0.033 4.033 18 O -0.534 6.534 19 Si 0.672 3.328 20 C -0.128 4.128 21 C -0.139 4.139 22 H 0.041 0.959 23 H 0.041 0.959 24 H 0.086 0.914 25 H 0.050 0.950 26 H 0.051 0.949 27 H 0.090 0.910 28 H 0.074 0.926 29 H 0.401 0.599 30 H 0.080 0.920 31 H 0.104 0.896 32 H 0.067 0.933 33 H 0.413 0.587 34 H 0.126 0.874 35 H 0.381 0.619 36 H -0.251 1.251 37 H -0.244 1.244 38 H 0.146 0.854 39 H 0.077 0.923 40 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.848 -1.062 0.324 1.397 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.310 6.310 3 C -0.007 4.007 4 C -0.128 4.128 5 H 0.116 0.884 6 C -0.182 4.182 7 C 0.017 3.983 8 H 0.122 0.878 9 N -0.360 5.360 10 C 0.386 3.614 11 O -0.426 6.426 12 C -0.251 4.251 13 C 0.006 3.994 14 C -0.157 4.157 15 N -0.144 5.144 16 C -0.137 4.137 17 C -0.145 4.145 18 O -0.339 6.339 19 Si 0.572 3.428 20 C -0.152 4.152 21 C -0.177 4.177 22 H 0.059 0.941 23 H 0.060 0.940 24 H 0.105 0.895 25 H 0.068 0.932 26 H 0.070 0.930 27 H 0.109 0.891 28 H 0.093 0.907 29 H 0.235 0.765 30 H 0.099 0.901 31 H 0.123 0.877 32 H 0.086 0.914 33 H 0.252 0.748 34 H 0.143 0.857 35 H 0.228 0.772 36 H -0.176 1.176 37 H -0.168 1.168 38 H 0.164 0.836 39 H 0.096 0.904 40 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 1.836 -0.575 0.459 1.978 hybrid contribution -0.408 0.247 0.788 0.921 sum 1.429 -0.328 1.247 1.924 Atomic orbital electron populations 1.22754 0.80921 1.02934 0.99990 1.87896 1.19744 1.27909 1.95402 1.22568 0.93103 0.84844 1.00198 1.22650 0.92997 0.98298 0.98852 0.88355 1.23528 0.97175 1.01143 0.96358 1.21754 0.85336 0.94930 0.96229 0.87765 1.45427 1.11984 1.57301 1.21334 1.17299 0.81405 0.78425 0.84273 1.90748 1.83178 1.48734 1.19940 1.20082 0.94783 1.12447 0.97774 1.20403 0.90612 0.95254 0.93132 1.20659 1.03490 1.01076 0.90456 1.41703 1.14231 1.44215 1.14287 1.20525 0.93946 1.08422 0.90855 1.24425 1.07209 0.86886 0.95991 1.86551 1.73340 1.28971 1.45022 0.95458 0.74237 0.83944 0.89132 1.21801 0.96373 1.00770 0.96284 1.23329 0.97133 0.97077 1.00127 0.94062 0.94036 0.89529 0.93205 0.93028 0.89131 0.90721 0.76460 0.90095 0.87726 0.91386 0.74760 0.85706 0.77186 1.17604 1.16754 0.83612 0.90435 0.88465 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 11.01 101.05 1.11 1.11 16 2 O -0.39 -0.96 10.70 -35.23 -0.38 -1.34 16 3 C 0.07 0.02 5.78 37.16 0.21 0.23 16 4 C -0.11 0.03 3.90 -89.66 -0.35 -0.32 16 5 H 0.10 0.01 8.14 -51.93 -0.42 -0.41 16 6 C -0.14 -0.09 7.45 -25.78 -0.19 -0.28 16 7 C 0.12 0.09 4.30 -67.12 -0.29 -0.20 16 8 H 0.10 0.22 7.50 -51.93 -0.39 -0.17 16 9 N -0.71 -0.80 5.26 -54.14 -0.28 -1.09 16 10 C 0.60 2.16 7.81 -12.59 -0.10 2.06 16 11 O -0.55 -3.52 14.43 5.26 0.08 -3.45 16 12 C -0.24 -0.55 6.29 -103.35 -0.65 -1.20 16 13 C 0.12 0.12 7.17 -81.88 -0.59 -0.46 16 14 C -0.10 0.01 9.88 36.01 0.36 0.37 16 15 N -0.54 0.62 5.41 -5.42 -0.03 0.59 16 16 C -0.03 0.01 6.09 -81.86 -0.50 -0.49 16 17 C -0.03 0.05 2.98 36.01 0.11 0.15 16 18 O -0.53 0.43 12.88 -35.23 -0.45 -0.02 16 19 Si 0.67 -1.75 30.96 -169.99 -5.26 -7.02 16 20 C -0.13 -0.10 10.45 -37.49 -0.39 -0.49 16 21 C -0.14 0.18 7.38 -25.92 -0.19 -0.02 16 22 H 0.04 -0.04 8.14 -51.93 -0.42 -0.46 16 23 H 0.04 -0.03 8.14 -51.93 -0.42 -0.46 16 24 H 0.09 -0.07 8.14 -51.93 -0.42 -0.49 16 25 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 26 H 0.05 -0.02 7.85 -51.93 -0.41 -0.43 16 27 H 0.09 0.01 7.90 -51.93 -0.41 -0.40 16 28 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 29 H 0.40 -0.29 7.83 -40.82 -0.32 -0.60 16 30 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.10 0.20 6.47 -51.93 -0.34 -0.14 16 32 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 33 H 0.41 -1.59 6.72 -40.82 -0.27 -1.86 16 34 H 0.13 -0.15 7.96 -51.93 -0.41 -0.57 16 35 H 0.38 -1.68 8.70 45.56 0.40 -1.28 16 36 H -0.25 0.08 7.11 56.52 0.40 0.48 16 37 H -0.24 -0.20 7.11 56.52 0.40 0.20 16 38 H 0.15 -0.08 7.70 -52.49 -0.40 -0.48 16 39 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 40 H 0.10 -0.21 8.10 -51.93 -0.42 -0.63 16 LS Contribution 334.35 15.07 5.04 5.04 Total: 0.00 -8.09 334.35 -8.73 -16.82 By element: Atomic # 1 Polarization: -4.02 SS G_CDS: -5.98 Total: -10.00 kcal Atomic # 6 Polarization: 1.92 SS G_CDS: -1.46 Total: 0.46 kcal Atomic # 7 Polarization: -0.18 SS G_CDS: -0.31 Total: -0.50 kcal Atomic # 8 Polarization: -4.05 SS G_CDS: -0.75 Total: -4.81 kcal Atomic # 14 Polarization: -1.75 SS G_CDS: -5.26 Total: -7.02 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -8.09 -8.73 -16.82 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16535612_9865296.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.133 kcal (2) G-P(sol) polarization free energy of solvation -8.093 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.226 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.732 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.825 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.957 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds