Wall clock time and date at job start Tue Mar 9 2021 13:13:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52990 * 1 3 3 O 1.42908 * 109.47023 * 2 1 4 4 C 1.35895 * 116.99898 * 275.32250 * 3 2 1 5 5 C 1.38734 * 120.05598 * 5.08453 * 4 3 2 6 6 C 1.38147 * 119.94225 * 179.74077 * 5 4 3 7 7 C 1.38274 * 120.05665 * 0.51453 * 6 5 4 8 8 C 1.50696 * 119.94617 * 179.74579 * 7 6 5 9 9 O 1.42895 * 109.47422 * 120.01912 * 8 7 6 10 10 Si 1.86303 * 109.46970 * 0.02562 * 8 7 6 11 11 C 1.38266 * 120.10692 * 359.76273 * 7 6 5 12 12 C 1.38147 * 120.05940 * 359.97438 * 11 7 6 13 13 C 1.50695 * 109.47418 * 119.99997 * 2 1 3 14 14 O 1.21284 * 120.00464 * 245.00554 * 13 2 1 15 15 N 1.34780 * 120.00051 * 64.99859 * 13 2 1 16 16 C 1.46501 * 120.00129 * 180.02562 * 15 13 2 17 17 H 1.09001 * 112.84864 * 23.53395 * 16 15 13 18 18 C 1.53776 * 113.61428 * 154.72525 * 16 15 13 19 19 C 1.53772 * 87.08380 * 139.98207 * 18 16 15 20 20 H 1.09000 * 113.61467 * 89.11250 * 19 18 16 21 21 C 1.53004 * 113.61799 * 219.93707 * 19 18 16 22 22 O 1.42896 * 109.47110 * 185.00013 * 21 19 18 23 23 C 1.35902 * 116.99898 * 180.02562 * 22 21 19 24 24 C 1.38736 * 120.05438 * 359.72365 * 23 22 21 25 25 C 1.38139 * 119.94098 * 179.70111 * 24 23 22 26 26 C 1.38270 * 120.05693 * 0.59754 * 25 24 23 27 27 C 1.38262 * 120.11356 * 359.67615 * 26 25 24 28 28 C 1.38148 * 120.05251 * 0.02562 * 27 26 25 29 29 C 1.53778 * 113.61390 * 252.22399 * 16 15 13 30 30 H 1.09003 * 109.47486 * 300.00275 * 1 2 3 31 31 H 1.09001 * 109.47552 * 59.99790 * 1 2 3 32 32 H 1.09002 * 109.47141 * 179.97438 * 1 2 3 33 33 H 1.09005 * 109.47187 * 240.00171 * 2 1 3 34 34 H 1.07997 * 120.02955 * 359.97438 * 5 4 3 35 35 H 1.08000 * 119.97497 * 180.27835 * 6 5 4 36 36 H 1.09006 * 109.46679 * 240.02188 * 8 7 6 37 37 H 0.96703 * 113.99923 * 300.00154 * 9 8 7 38 38 H 1.48505 * 109.99805 * 180.02562 * 10 8 7 39 39 H 1.48495 * 110.00435 * 301.32178 * 10 8 7 40 40 H 1.08003 * 119.96756 * 179.97438 * 11 7 6 41 41 H 1.07997 * 120.02677 * 179.97438 * 12 11 7 42 42 H 0.97000 * 119.99722 * 359.72695 * 15 13 2 43 43 H 1.09006 * 113.61626 * 254.53160 * 18 16 15 44 44 H 1.09007 * 113.61574 * 25.42891 * 18 16 15 45 45 H 1.08998 * 109.46552 * 304.99663 * 21 19 18 46 46 H 1.08996 * 109.46905 * 64.99490 * 21 19 18 47 47 H 1.07999 * 120.02575 * 359.97438 * 24 23 22 48 48 H 1.08006 * 119.97367 * 180.27529 * 25 24 23 49 49 H 1.07998 * 119.94247 * 179.70298 * 26 25 24 50 50 H 1.07992 * 119.97605 * 180.02562 * 27 26 25 51 51 H 1.08000 * 120.02658 * 180.02562 * 28 27 26 52 52 H 1.08999 * 113.61359 * 334.56605 * 29 16 15 53 53 H 1.08996 * 113.61588 * 105.47188 * 29 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0062 1.3474 0.0000 4 6 2.1060 1.9664 -1.2056 5 6 1.6544 1.3303 -2.3528 6 6 1.7520 1.9640 -3.5765 7 6 2.3090 3.2269 -3.6599 8 6 2.4195 3.9135 -4.9968 9 8 1.6855 5.1391 -4.9650 10 14 1.7219 2.8064 -6.3230 11 6 2.7650 3.8605 -2.5188 12 6 2.6647 3.2333 -1.2920 13 6 2.0323 -0.7104 1.2304 14 8 2.6529 -0.0979 2.0734 15 7 1.7919 -2.0264 1.3941 16 6 2.2798 -2.7169 2.5906 17 1 2.4447 -2.0424 3.4308 18 6 1.4633 -3.9678 2.9559 19 6 2.8006 -4.6435 3.3017 20 1 3.1094 -4.4964 4.3367 21 6 2.8807 -6.1061 2.8599 22 8 4.1050 -6.6778 3.3249 23 6 4.3343 -7.9810 3.0150 24 6 3.3974 -8.6965 2.2835 25 6 3.6357 -10.0192 1.9645 26 6 4.8010 -10.6338 2.3843 27 6 5.7337 -9.9246 3.1183 28 6 5.5030 -8.5998 3.4346 29 6 3.4604 -3.6636 2.3170 30 1 -0.3634 0.5139 0.8900 31 1 -0.3634 0.5139 -0.8899 32 1 -0.3633 -1.0277 -0.0005 33 1 1.8933 -0.5138 -0.8900 34 1 1.2234 0.3421 -2.2888 35 1 1.3965 1.4711 -4.4693 36 1 3.4673 4.1229 -5.2122 37 1 0.7432 5.0285 -4.7781 38 1 1.8256 3.4719 -7.6465 39 1 2.4559 1.5157 -6.3452 40 1 3.2001 4.8467 -2.5866 41 1 3.0215 3.7286 -0.4010 42 1 1.2920 -2.5154 0.7219 43 1 0.8099 -3.8266 3.8169 44 1 0.9528 -4.4197 2.1054 45 1 2.0396 -6.6586 3.2787 46 1 2.8449 -6.1595 1.7719 47 1 2.4847 -8.2183 1.9599 48 1 2.9087 -10.5754 1.3912 49 1 4.9831 -11.6694 2.1380 50 1 6.6432 -10.4067 3.4446 51 1 6.2320 -8.0461 4.0076 52 1 3.4958 -4.0324 1.2919 53 1 4.4192 -3.2769 2.6622 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16536076_10157680.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:48 Heat of formation + Delta-G solvation = -54.436228 kcal Electronic energy + Delta-G solvation = -33505.412957 eV Core-core repulsion = 28889.515810 eV Total energy + Delta-G solvation = -4615.897147 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.182 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -41.88669 -41.29586 -40.78832 -39.73691 -38.90033 -38.07670 -37.14398 -35.02529 -33.16267 -32.03134 -31.86405 -31.53513 -30.97952 -29.06152 -26.77849 -26.70487 -25.73267 -24.48251 -23.90298 -23.34179 -22.69672 -22.16043 -21.56960 -20.61545 -19.54130 -19.20609 -18.56437 -18.07624 -17.69204 -17.02410 -16.94954 -16.84488 -16.79250 -16.64751 -16.24252 -16.11818 -15.95275 -15.62723 -15.57454 -15.30808 -15.11001 -14.68772 -14.43528 -14.39601 -14.29554 -14.12708 -14.05284 -13.62284 -13.58375 -13.47998 -13.29711 -13.20259 -12.99893 -12.90080 -12.57554 -12.39565 -12.18634 -12.09890 -12.06186 -12.03659 -11.84664 -11.67494 -11.65234 -11.30519 -10.90233 -10.40797 -10.16471 -10.05778 -9.97206 -9.22784 -9.18241 -4.98975 0.25731 0.28717 0.37364 0.47612 1.34295 1.37702 1.49173 1.64704 1.99140 2.18014 2.51357 2.64310 2.83137 3.37388 3.44854 3.49761 3.55902 3.66063 3.71377 3.72347 3.76168 3.85581 3.87144 3.89624 3.94275 3.96386 4.22750 4.25788 4.28230 4.29296 4.35778 4.37124 4.49023 4.49947 4.53996 4.58432 4.64779 4.67470 4.70673 4.71628 4.74072 4.79905 4.95311 4.95587 5.02092 5.06745 5.11000 5.16884 5.18888 5.24154 5.33640 5.46755 5.48379 5.49205 5.59937 5.69036 5.85124 6.25401 6.44812 6.46604 6.80033 7.08931 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.062 3.938 3 O -0.315 6.315 4 C 0.121 3.879 5 C -0.201 4.201 6 C -0.074 4.074 7 C -0.161 4.161 8 C -0.074 4.074 9 O -0.559 6.559 10 Si 0.784 3.216 11 C -0.060 4.060 12 C -0.168 4.168 13 C 0.515 3.485 14 O -0.573 6.573 15 N -0.695 5.695 16 C 0.118 3.882 17 H 0.093 0.907 18 C -0.114 4.114 19 C -0.106 4.106 20 H 0.095 0.905 21 C 0.069 3.931 22 O -0.334 6.334 23 C 0.112 3.888 24 C -0.216 4.216 25 C -0.088 4.088 26 C -0.169 4.169 27 C -0.088 4.088 28 C -0.177 4.177 29 C -0.146 4.146 30 H 0.057 0.943 31 H 0.090 0.910 32 H 0.112 0.888 33 H 0.128 0.872 34 H 0.164 0.836 35 H 0.155 0.845 36 H 0.102 0.898 37 H 0.395 0.605 38 H -0.303 1.303 39 H -0.281 1.281 40 H 0.132 0.868 41 H 0.124 0.876 42 H 0.422 0.578 43 H 0.090 0.910 44 H 0.119 0.881 45 H 0.077 0.923 46 H 0.078 0.922 47 H 0.146 0.854 48 H 0.146 0.854 49 H 0.141 0.859 50 H 0.144 0.856 51 H 0.128 0.872 52 H 0.099 0.901 53 H 0.054 0.946 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.246 -7.499 -4.110 11.879 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.229 4.229 2 C 0.003 3.997 3 O -0.229 6.229 4 C 0.076 3.924 5 C -0.219 4.219 6 C -0.092 4.092 7 C -0.161 4.161 8 C -0.184 4.184 9 O -0.367 6.367 10 Si 0.690 3.310 11 C -0.078 4.078 12 C -0.186 4.186 13 C 0.301 3.699 14 O -0.452 6.452 15 N -0.349 5.349 16 C 0.013 3.987 17 H 0.111 0.889 18 C -0.152 4.152 19 C -0.125 4.125 20 H 0.114 0.886 21 C -0.006 4.006 22 O -0.248 6.248 23 C 0.067 3.933 24 C -0.235 4.235 25 C -0.106 4.106 26 C -0.187 4.187 27 C -0.106 4.106 28 C -0.195 4.195 29 C -0.185 4.185 30 H 0.076 0.924 31 H 0.109 0.891 32 H 0.131 0.869 33 H 0.146 0.854 34 H 0.181 0.819 35 H 0.172 0.828 36 H 0.119 0.881 37 H 0.245 0.755 38 H -0.232 1.232 39 H -0.208 1.208 40 H 0.150 0.850 41 H 0.142 0.858 42 H 0.261 0.739 43 H 0.109 0.891 44 H 0.137 0.863 45 H 0.096 0.904 46 H 0.096 0.904 47 H 0.164 0.836 48 H 0.163 0.837 49 H 0.159 0.841 50 H 0.162 0.838 51 H 0.146 0.854 52 H 0.118 0.882 53 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -6.921 -7.027 -4.055 10.664 hybrid contribution 0.788 0.319 0.342 0.917 sum -6.132 -6.708 -3.713 9.817 Atomic orbital electron populations 1.22378 0.90058 1.05926 1.04536 1.22476 0.97492 0.82009 0.97700 1.86200 1.81487 1.27156 1.28023 1.19237 0.95795 0.92909 0.84481 1.21498 1.06321 1.02701 0.91420 1.21069 0.96578 0.93627 0.97878 1.20363 1.03440 0.96291 0.96030 1.25201 1.00013 0.92663 1.00500 1.86464 1.26324 1.29498 1.94374 0.93756 0.88870 0.74665 0.73699 1.20897 0.96612 0.99524 0.90759 1.20620 1.04415 0.94491 0.99102 1.20654 0.78878 0.82951 0.87443 1.90755 1.41647 1.67202 1.45548 1.45683 1.57132 1.07871 1.24176 1.22461 0.95770 0.92309 0.88177 0.88888 1.23302 0.95328 0.92698 1.03831 1.22307 0.98367 0.91310 1.00511 0.88638 1.22985 0.84689 0.93224 0.99705 1.86060 1.41849 1.22816 1.74104 1.19247 0.94979 0.83620 0.95456 1.21516 1.00968 0.96588 1.04381 1.21334 0.97425 0.94087 0.97707 1.21429 0.95061 1.01401 1.00850 1.21280 0.99886 0.92944 0.96478 1.20706 0.97269 0.96131 1.05413 1.23580 0.98019 0.96287 1.00592 0.92373 0.89086 0.86922 0.85437 0.81880 0.82823 0.88072 0.75504 1.23194 1.20782 0.84993 0.85780 0.73936 0.89131 0.86268 0.90444 0.90399 0.83625 0.83652 0.84146 0.83782 0.85403 0.88246 0.92695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 1.34 9.12 71.98 0.66 2.00 16 2 C 0.06 -0.13 2.64 29.84 0.08 -0.05 16 3 O -0.32 -2.10 9.34 -73.38 -0.69 -2.79 16 4 C 0.12 0.47 6.60 22.51 0.15 0.62 16 5 C -0.20 0.51 8.23 22.37 0.18 0.69 16 6 C -0.07 0.23 8.66 22.26 0.19 0.42 16 7 C -0.16 -0.03 5.39 -19.85 -0.11 -0.14 16 8 C -0.07 0.04 2.82 71.23 0.20 0.24 16 9 O -0.56 -0.28 12.77 -148.98 -1.90 -2.18 16 10 Si 0.78 -2.80 29.78 68.60 2.04 -0.76 16 11 C -0.06 -0.19 9.60 22.25 0.21 0.02 16 12 C -0.17 -0.92 9.99 22.37 0.22 -0.70 16 13 C 0.51 1.61 7.18 87.65 0.63 2.24 16 14 O -0.57 -8.76 16.10 15.94 0.26 -8.51 16 15 N -0.70 3.61 5.32 -440.04 -2.34 1.27 16 16 C 0.12 -0.35 4.24 45.51 0.19 -0.16 16 17 H 0.09 0.29 7.46 -2.39 -0.02 0.27 16 18 C -0.11 1.03 7.39 31.12 0.23 1.26 16 19 C -0.11 0.47 4.01 -10.27 -0.04 0.43 16 20 H 0.10 -0.17 8.14 -2.39 -0.02 -0.19 16 21 C 0.07 -0.26 4.58 71.98 0.33 0.07 16 22 O -0.33 -1.36 10.14 -92.44 -0.94 -2.29 16 23 C 0.11 0.49 6.69 22.51 0.15 0.64 16 24 C -0.22 -0.14 9.04 22.37 0.20 0.07 16 25 C -0.09 0.03 10.04 22.25 0.22 0.25 16 26 C -0.17 -0.07 10.04 22.28 0.22 0.16 16 27 C -0.09 -0.15 10.04 22.25 0.22 0.07 16 28 C -0.18 -0.81 9.99 22.37 0.22 -0.58 16 29 C -0.15 0.35 7.43 31.12 0.23 0.58 16 30 H 0.06 -0.18 8.14 -2.39 -0.02 -0.20 16 31 H 0.09 -0.86 6.91 -2.39 -0.02 -0.88 16 32 H 0.11 -1.65 7.92 -2.39 -0.02 -1.67 16 33 H 0.13 -1.06 6.31 -2.38 -0.02 -1.08 16 34 H 0.16 -1.55 5.43 -2.91 -0.02 -1.57 16 35 H 0.15 -1.31 4.87 -2.91 -0.01 -1.32 16 36 H 0.10 0.13 7.96 -2.38 -0.02 0.11 16 37 H 0.40 -3.07 8.70 -74.06 -0.64 -3.71 16 38 H -0.30 -1.40 7.11 99.48 0.71 -0.69 16 39 H -0.28 -0.05 7.11 99.48 0.71 0.66 16 40 H 0.13 0.34 8.06 -2.91 -0.02 0.32 16 41 H 0.12 0.79 8.06 -2.91 -0.02 0.76 16 42 H 0.42 -5.73 8.50 -92.71 -0.79 -6.52 16 43 H 0.09 -0.84 8.14 -2.38 -0.02 -0.86 16 44 H 0.12 -1.70 8.08 -2.38 -0.02 -1.72 16 45 H 0.08 -0.48 7.65 -2.39 -0.02 -0.50 16 46 H 0.08 -0.52 7.38 -2.39 -0.02 -0.54 16 47 H 0.15 -0.65 6.30 -2.91 -0.02 -0.66 16 48 H 0.15 -0.75 8.06 -2.91 -0.02 -0.77 16 49 H 0.14 -0.51 8.06 -2.91 -0.02 -0.53 16 50 H 0.14 -0.35 8.06 -2.91 -0.02 -0.37 16 51 H 0.13 0.47 8.06 -2.91 -0.02 0.44 16 52 H 0.10 -0.49 7.90 -2.39 -0.02 -0.50 16 53 H 0.05 0.14 8.14 -2.39 -0.02 0.12 16 Total: 0.00 -29.35 433.67 0.60 -28.75 By element: Atomic # 1 Polarization: -21.17 SS G_CDS: -0.45 Total: -21.61 kcal Atomic # 6 Polarization: 3.51 SS G_CDS: 4.61 Total: 8.12 kcal Atomic # 7 Polarization: 3.61 SS G_CDS: -2.34 Total: 1.27 kcal Atomic # 8 Polarization: -12.50 SS G_CDS: -3.27 Total: -15.77 kcal Atomic # 14 Polarization: -2.80 SS G_CDS: 2.04 Total: -0.76 kcal Total: -29.35 0.60 -28.75 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16536076_10157680.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.687 kcal (2) G-P(sol) polarization free energy of solvation -29.350 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.037 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.601 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.750 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.436 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds