Wall clock time and date at job start Tue Mar 9 2021 13:14:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86297 * 109.47241 * 2 1 4 4 C 1.50699 * 109.46886 * 239.99650 * 2 1 3 5 5 C 1.38394 * 119.82973 * 300.00435 * 4 2 1 6 6 C 1.37895 * 120.16996 * 180.02562 * 5 4 2 7 7 C 1.39831 * 119.82797 * 0.02562 * 6 5 4 8 8 C 1.47208 * 120.17448 * 179.97438 * 7 6 5 9 9 C 1.34804 * 120.00257 * 179.97438 * 8 7 6 10 10 C 1.46434 * 119.99689 * 179.97438 * 9 8 7 11 11 O 1.21698 * 120.00143 * 0.02562 * 10 9 8 12 12 N 1.34773 * 119.99353 * 179.97438 * 10 9 8 13 13 C 1.46508 * 119.99594 * 180.02562 * 12 10 9 14 14 H 1.09006 * 112.85122 * 336.19708 * 13 12 10 15 15 C 1.53779 * 113.69115 * 107.46541 * 13 12 10 16 16 C 1.53784 * 87.08045 * 139.99342 * 15 13 12 17 17 H 1.08994 * 113.61477 * 89.11454 * 16 15 13 18 18 C 1.52997 * 113.61270 * 220.02125 * 16 15 13 19 19 O 1.42902 * 109.47204 * 272.49576 * 18 16 15 20 20 C 1.35895 * 117.00232 * 180.02562 * 19 18 16 21 21 C 1.38732 * 120.05745 * 359.72162 * 20 19 18 22 22 C 1.38148 * 119.94512 * 179.70375 * 21 20 19 23 23 C 1.38267 * 120.05386 * 0.59673 * 22 21 20 24 24 C 1.38267 * 120.11119 * 359.67986 * 23 22 21 25 25 C 1.38141 * 120.05657 * 0.02562 * 24 23 22 26 26 C 1.53779 * 113.61245 * 205.00346 * 13 12 10 27 27 C 1.39837 * 119.66139 * 0.24930 * 7 6 5 28 28 C 1.37899 * 119.82351 * 359.51515 * 27 7 6 29 29 H 0.96701 * 114.00169 * 59.99747 * 1 2 3 30 30 H 1.08997 * 109.46996 * 119.99988 * 2 1 3 31 31 H 1.48502 * 109.99953 * 298.67891 * 3 2 1 32 32 H 1.48503 * 110.00192 * 59.99831 * 3 2 1 33 33 H 1.08005 * 119.91744 * 359.97274 * 5 4 2 34 34 H 1.08000 * 120.08481 * 179.97438 * 6 5 4 35 35 H 1.08009 * 119.99130 * 359.97438 * 8 7 6 36 36 H 1.07998 * 120.00112 * 359.97438 * 9 8 7 37 37 H 0.96996 * 120.00779 * 0.02562 * 12 10 9 38 38 H 1.09002 * 113.61557 * 25.44454 * 15 13 12 39 39 H 1.09004 * 113.61501 * 254.53874 * 15 13 12 40 40 H 1.08998 * 109.47573 * 32.49481 * 18 16 15 41 41 H 1.09003 * 109.47157 * 152.50001 * 18 16 15 42 42 H 1.08004 * 120.02818 * 0.02562 * 21 20 19 43 43 H 1.08004 * 119.97050 * 180.27608 * 22 21 20 44 44 H 1.08002 * 119.94265 * 179.70375 * 23 22 21 45 45 H 1.08000 * 119.96751 * 180.02562 * 24 23 22 46 46 H 1.07994 * 120.02821 * 179.97438 * 25 24 23 47 47 H 1.08997 * 113.61646 * 105.38794 * 26 13 12 48 48 H 1.09000 * 113.61527 * 334.48065 * 26 13 12 49 49 H 1.07995 * 120.09126 * 179.75041 * 27 7 6 50 50 H 1.07998 * 119.91709 * 180.22898 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.5947 -2.0355 -1.4459 6 6 2.0508 -2.6926 -2.5691 7 6 2.8559 -2.0168 -3.4913 8 6 3.3475 -2.7110 -4.6927 9 6 4.1230 -2.0561 -5.5798 10 6 4.6125 -2.7469 -6.7746 11 8 4.3188 -3.9122 -6.9669 12 7 5.3874 -2.0919 -7.6616 13 6 5.8766 -2.7829 -8.8573 14 1 5.9160 -3.8653 -8.7343 15 6 5.1854 -2.3352 -10.1560 16 6 6.5673 -2.4146 -10.8261 17 1 6.7955 -3.3962 -11.2413 18 6 6.8378 -1.2743 -11.8096 19 8 6.3432 -1.6322 -13.1017 20 6 6.5054 -0.7226 -14.0981 21 6 7.1226 0.4920 -13.8366 22 6 7.2918 1.4126 -14.8527 23 6 6.8355 1.1292 -16.1268 24 6 6.2149 -0.0782 -16.3888 25 6 6.0488 -1.0046 -15.3775 26 6 7.1701 -2.1806 -9.4308 27 6 3.1964 -0.6798 -3.2637 28 6 2.7284 -0.0350 -2.1381 29 1 -0.3933 0.4417 -0.7650 30 1 1.7923 -0.5138 0.8900 31 1 1.5880 2.4585 -1.2243 32 1 1.5615 2.4679 1.2085 33 1 0.9738 -2.5565 -0.7320 34 1 1.7877 -3.7267 -2.7357 35 1 3.0869 -3.7452 -4.8634 36 1 4.3833 -1.0219 -5.4093 37 1 5.6212 -1.1631 -7.5086 38 1 4.7803 -1.3244 -10.1090 39 1 4.4703 -3.0614 -10.5427 40 1 6.3347 -0.3706 -11.4656 41 1 7.9110 -1.0926 -11.8690 42 1 7.4753 0.7156 -12.8405 43 1 7.7763 2.3564 -14.6505 44 1 6.9644 1.8522 -16.9187 45 1 5.8597 -0.2973 -17.3849 46 1 5.5636 -1.9473 -15.5826 47 1 8.0573 -2.7819 -9.2321 48 1 7.3077 -1.1275 -9.1855 49 1 3.8211 -0.1524 -3.9693 50 1 2.9874 0.9987 -1.9627 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16536076_12360594.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:14:56 Heat of formation + Delta-G solvation = -9.395079 kcal Electronic energy + Delta-G solvation = -29764.202841 eV Core-core repulsion = 25496.252496 eV Total energy + Delta-G solvation = -4267.950345 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.166 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -41.46196 -40.91897 -40.62886 -39.48686 -38.10317 -37.90701 -35.10723 -34.62301 -32.31517 -32.01085 -31.41088 -30.96950 -29.17295 -27.25649 -26.86590 -25.00428 -24.14359 -23.70867 -23.22322 -22.52214 -21.79455 -21.12154 -20.21711 -19.17467 -18.91011 -18.15320 -17.75772 -17.18417 -16.94823 -16.88895 -16.64962 -16.47901 -16.27913 -16.14602 -15.82754 -15.66677 -15.32589 -15.21100 -14.95968 -14.61277 -14.39096 -14.26080 -14.14380 -14.09237 -13.88077 -13.65540 -13.35277 -13.28373 -13.06777 -13.02734 -12.58988 -12.42010 -12.30636 -12.15533 -12.08538 -11.88892 -11.71868 -11.68447 -11.38628 -11.36203 -10.90243 -10.67613 -10.08377 -10.06820 -9.94092 -9.32064 -9.13902 -5.03434 -0.60417 0.29369 0.40301 0.52240 0.86082 1.20900 1.52441 1.90051 2.03431 2.24397 2.28234 2.73624 2.86710 3.27682 3.30030 3.38612 3.47777 3.57697 3.66743 3.68533 3.72851 3.80048 3.87571 3.92650 4.07306 4.10779 4.13593 4.20551 4.22555 4.23921 4.28244 4.36486 4.46826 4.47250 4.51356 4.52816 4.60909 4.67592 4.74378 4.75563 4.87436 4.87648 4.96070 5.00269 5.06534 5.06850 5.17316 5.29596 5.36193 5.38700 5.48142 5.50710 5.53513 5.62270 5.79826 5.83752 6.32026 6.46781 6.48295 7.22855 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.078 4.078 3 Si 0.684 3.316 4 C -0.106 4.106 5 C -0.095 4.095 6 C -0.092 4.092 7 C -0.073 4.073 8 C -0.015 4.015 9 C -0.215 4.215 10 C 0.549 3.451 11 O -0.542 6.542 12 N -0.717 5.717 13 C 0.124 3.876 14 H 0.119 0.881 15 C -0.145 4.145 16 C -0.108 4.108 17 H 0.108 0.892 18 C 0.072 3.928 19 O -0.313 6.313 20 C 0.130 3.870 21 C -0.211 4.211 22 C -0.081 4.081 23 C -0.160 4.160 24 C -0.080 4.080 25 C -0.154 4.154 26 C -0.136 4.136 27 C -0.096 4.096 28 C -0.119 4.119 29 H 0.377 0.623 30 H 0.120 0.880 31 H -0.260 1.260 32 H -0.256 1.256 33 H 0.131 0.869 34 H 0.132 0.868 35 H 0.138 0.862 36 H 0.131 0.869 37 H 0.402 0.598 38 H 0.086 0.914 39 H 0.078 0.922 40 H 0.064 0.936 41 H 0.065 0.935 42 H 0.126 0.874 43 H 0.125 0.875 44 H 0.124 0.876 45 H 0.130 0.870 46 H 0.131 0.869 47 H 0.083 0.917 48 H 0.090 0.910 49 H 0.132 0.868 50 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.868 4.252 0.417 5.763 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.187 4.187 3 Si 0.586 3.414 4 C -0.106 4.106 5 C -0.113 4.113 6 C -0.110 4.110 7 C -0.073 4.073 8 C -0.034 4.034 9 C -0.236 4.236 10 C 0.338 3.662 11 O -0.421 6.421 12 N -0.367 5.367 13 C 0.019 3.981 14 H 0.137 0.863 15 C -0.184 4.184 16 C -0.127 4.127 17 H 0.126 0.874 18 C -0.003 4.003 19 O -0.226 6.226 20 C 0.084 3.916 21 C -0.230 4.230 22 C -0.099 4.099 23 C -0.178 4.178 24 C -0.098 4.098 25 C -0.172 4.172 26 C -0.174 4.174 27 C -0.113 4.113 28 C -0.136 4.136 29 H 0.224 0.776 30 H 0.138 0.862 31 H -0.185 1.185 32 H -0.181 1.181 33 H 0.149 0.851 34 H 0.150 0.850 35 H 0.156 0.844 36 H 0.148 0.852 37 H 0.237 0.763 38 H 0.105 0.895 39 H 0.097 0.903 40 H 0.082 0.918 41 H 0.083 0.917 42 H 0.144 0.856 43 H 0.143 0.857 44 H 0.142 0.858 45 H 0.148 0.852 46 H 0.148 0.852 47 H 0.102 0.898 48 H 0.108 0.892 49 H 0.149 0.851 50 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 3.453 3.750 0.842 5.167 hybrid contribution -0.793 0.567 -0.433 1.067 sum 2.661 4.317 0.409 5.087 Atomic orbital electron populations 1.86611 1.17565 1.79951 1.49359 1.25082 0.84090 1.11086 0.98487 0.95025 0.91667 0.74398 0.80351 1.20474 0.98321 0.95131 0.96706 1.20999 0.99022 0.93793 0.97454 1.21470 0.96025 1.00121 0.93377 1.19073 0.99200 0.93970 0.95066 1.22420 0.91134 0.99631 0.90248 1.22898 1.03599 1.01117 0.96000 1.18379 0.78188 0.86454 0.83157 1.90839 1.57613 1.16714 1.76919 1.45842 1.52243 1.15436 1.23175 1.22476 0.93817 0.98857 0.82986 0.86293 1.23564 0.96723 1.02771 0.95348 1.22367 0.97652 0.99714 0.92918 0.87393 1.22806 0.98873 0.97788 0.80852 1.86082 1.77021 1.41809 1.17727 1.19033 0.95399 0.88538 0.88605 1.21264 1.06130 0.94887 1.00700 1.20992 0.97584 0.98653 0.92644 1.21122 1.01593 0.97874 0.97188 1.21028 0.96993 0.93096 0.98690 1.20499 1.04712 1.01556 0.90447 1.23361 0.97863 1.02249 0.93949 1.21352 0.99053 0.93733 0.97201 1.20953 0.98407 0.99727 0.94530 0.77581 0.86181 1.18482 1.18119 0.85132 0.85031 0.84445 0.85180 0.76341 0.89529 0.90349 0.91820 0.91682 0.85600 0.85742 0.85789 0.85237 0.85153 0.89825 0.89178 0.85068 0.85217 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.38 12.76 -35.23 -0.45 -0.83 16 2 C -0.08 0.07 2.82 36.01 0.10 0.17 16 3 Si 0.68 -1.09 29.77 -169.99 -5.06 -6.16 16 4 C -0.11 0.06 5.40 -104.50 -0.56 -0.50 16 5 C -0.09 0.02 9.59 -39.65 -0.38 -0.36 16 6 C -0.09 0.03 9.80 -39.11 -0.38 -0.36 16 7 C -0.07 0.02 5.87 -105.06 -0.62 -0.60 16 8 C -0.01 0.00 9.46 -37.16 -0.35 -0.35 16 9 C -0.22 0.14 9.41 -37.50 -0.35 -0.21 16 10 C 0.55 0.87 7.74 -12.96 -0.10 0.77 16 11 O -0.54 -3.13 15.83 5.19 0.08 -3.05 16 12 N -0.72 0.89 5.35 -54.40 -0.29 0.60 16 13 C 0.12 -0.11 4.24 -67.12 -0.28 -0.40 16 14 H 0.12 0.11 7.46 -51.93 -0.39 -0.28 16 15 C -0.15 0.13 7.43 -25.92 -0.19 -0.06 16 16 C -0.11 0.18 4.01 -89.80 -0.36 -0.18 16 17 H 0.11 -0.12 8.14 -51.93 -0.42 -0.54 16 18 C 0.07 -0.07 4.58 37.16 0.17 0.10 16 19 O -0.31 -0.65 10.14 -19.41 -0.20 -0.84 16 20 C 0.13 0.29 6.69 -39.21 -0.26 0.03 16 21 C -0.21 -0.22 9.04 -39.43 -0.36 -0.58 16 22 C -0.08 -0.05 10.04 -39.60 -0.40 -0.45 16 23 C -0.16 -0.11 10.04 -39.56 -0.40 -0.51 16 24 C -0.08 -0.07 10.04 -39.61 -0.40 -0.47 16 25 C -0.15 -0.30 9.99 -39.43 -0.39 -0.69 16 26 C -0.14 0.41 7.39 -25.92 -0.19 0.22 16 27 C -0.10 0.13 9.41 -39.11 -0.37 -0.24 16 28 C -0.12 0.16 8.65 -39.64 -0.34 -0.18 16 29 H 0.38 -0.76 8.70 45.56 0.40 -0.36 16 30 H 0.12 -0.18 7.96 -51.93 -0.41 -0.60 16 31 H -0.26 -0.08 7.11 56.52 0.40 0.32 16 32 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 33 H 0.13 -0.09 8.06 -52.48 -0.42 -0.51 16 34 H 0.13 -0.21 8.06 -52.49 -0.42 -0.64 16 35 H 0.14 0.11 7.52 -52.48 -0.39 -0.28 16 36 H 0.13 -0.46 6.07 -52.49 -0.32 -0.78 16 37 H 0.40 -1.67 8.71 -40.82 -0.36 -2.03 16 38 H 0.09 -0.11 7.90 -51.93 -0.41 -0.52 16 39 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 40 H 0.06 -0.12 7.35 -51.93 -0.38 -0.50 16 41 H 0.06 -0.12 7.67 -51.93 -0.40 -0.52 16 42 H 0.13 -0.11 6.30 -52.48 -0.33 -0.44 16 43 H 0.12 -0.17 8.06 -52.48 -0.42 -0.59 16 44 H 0.12 -0.13 8.06 -52.49 -0.42 -0.56 16 45 H 0.13 -0.15 8.06 -52.49 -0.42 -0.57 16 46 H 0.13 0.13 8.06 -52.49 -0.42 -0.29 16 47 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 48 H 0.09 -0.40 8.08 -51.93 -0.42 -0.82 16 49 H 0.13 -0.47 6.17 -52.49 -0.32 -0.79 16 50 H 0.13 -0.41 4.85 -52.49 -0.25 -0.67 16 LS Contribution 417.22 15.07 6.29 6.29 Total: 0.00 -8.93 417.22 -13.05 -21.98 By element: Atomic # 1 Polarization: -6.12 SS G_CDS: -7.00 Total: -13.11 kcal Atomic # 6 Polarization: 1.55 SS G_CDS: -6.42 Total: -4.87 kcal Atomic # 7 Polarization: 0.89 SS G_CDS: -0.29 Total: 0.60 kcal Atomic # 8 Polarization: -4.17 SS G_CDS: -0.56 Total: -4.73 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.06 Total: -6.16 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -8.93 -13.05 -21.98 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16536076_12360594.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.583 kcal (2) G-P(sol) polarization free energy of solvation -8.932 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.651 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.046 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.978 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.395 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds