Wall clock time and date at job start Tue Mar 9 2021 13:15:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42892 * 1 3 3 C 1.35658 * 117.00377 * 2 1 4 4 C 1.40139 * 120.14934 * 180.30270 * 3 2 1 5 5 C 1.47538 * 120.19452 * 359.97438 * 4 3 2 6 6 O 1.21586 * 119.99750 * 0.25473 * 5 4 3 7 7 N 1.34778 * 119.99931 * 180.25579 * 5 4 3 8 8 C 1.46493 * 119.99964 * 179.97438 * 7 5 4 9 9 H 1.09002 * 112.84914 * 336.19861 * 8 7 5 10 10 C 1.53783 * 113.61343 * 107.50379 * 8 7 5 11 11 C 1.53786 * 87.08071 * 139.98255 * 10 8 7 12 12 H 1.08995 * 113.69252 * 89.12476 * 11 10 8 13 13 C 1.53001 * 113.61140 * 220.02016 * 11 10 8 14 14 O 1.42899 * 109.47019 * 272.49616 * 13 11 10 15 15 C 1.35902 * 117.00074 * 180.02562 * 14 13 11 16 16 C 1.38732 * 120.05514 * 359.72710 * 15 14 13 17 17 C 1.38145 * 119.94247 * 179.74619 * 16 15 14 18 18 C 1.38264 * 120.05446 * 0.50531 * 17 16 15 19 19 C 1.38264 * 120.11573 * 359.76599 * 18 17 16 20 20 C 1.38149 * 120.05192 * 359.97438 * 19 18 17 21 21 C 1.53778 * 113.61576 * 205.00038 * 8 7 5 22 22 C 1.39707 * 119.61320 * 180.25300 * 4 3 2 23 23 C 1.37790 * 119.90592 * 359.44148 * 22 4 3 24 24 C 1.50703 * 119.84641 * 180.30526 * 23 22 4 25 25 O 1.42902 * 109.47419 * 64.99994 * 24 23 22 26 26 Si 1.86300 * 109.47046 * 184.99865 * 24 23 22 27 27 C 1.38548 * 120.30348 * 0.28096 * 23 22 4 28 28 C 1.38051 * 120.38790 * 359.97438 * 27 23 22 29 29 H 1.09003 * 109.47087 * 300.00276 * 1 2 3 30 30 H 1.09003 * 109.47391 * 60.00333 * 1 2 3 31 31 H 1.08998 * 109.47460 * 180.02562 * 1 2 3 32 32 H 0.97001 * 119.99743 * 0.02562 * 7 5 4 33 33 H 1.09002 * 113.61512 * 254.52799 * 10 8 7 34 34 H 1.08998 * 113.61463 * 25.42864 * 10 8 7 35 35 H 1.08995 * 109.46979 * 32.49438 * 13 11 10 36 36 H 1.08996 * 109.47029 * 152.49678 * 13 11 10 37 37 H 1.08002 * 120.02758 * 359.97438 * 16 15 14 38 38 H 1.08001 * 119.97138 * 180.27291 * 17 16 15 39 39 H 1.08004 * 119.94353 * 179.75058 * 18 17 16 40 40 H 1.07991 * 119.97764 * 179.97438 * 19 18 17 41 41 H 1.08002 * 120.02761 * 179.97438 * 20 19 18 42 42 H 1.09006 * 113.61542 * 334.56941 * 21 8 7 43 43 H 1.09004 * 113.61861 * 105.46661 * 21 8 7 44 44 H 1.08002 * 120.04882 * 179.72425 * 22 4 3 45 45 H 1.08994 * 109.47132 * 304.99528 * 24 23 22 46 46 H 0.96695 * 113.99916 * 60.00020 * 25 24 23 47 47 H 1.48493 * 110.00151 * 179.97438 * 26 24 23 48 48 H 1.48505 * 110.00056 * 301.31996 * 26 24 23 49 49 H 1.08000 * 119.80164 * 180.02562 * 27 23 22 50 50 H 1.08001 * 119.95682 * 180.02562 * 28 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 3.4441 1.2856 -0.0064 5 6 4.2550 0.0530 -0.0126 6 8 3.7094 -1.0335 -0.0169 7 7 5.6005 0.1316 -0.0135 8 6 6.4056 -1.0923 -0.0191 9 1 5.8708 -1.9526 0.3833 10 6 7.0970 -1.3686 -1.3647 11 6 8.3233 -1.8181 -0.5528 12 1 8.3147 -2.8775 -0.2967 13 6 9.6554 -1.3624 -1.1517 14 8 10.1043 -2.3279 -2.1047 15 6 11.2821 -2.0732 -2.7331 16 6 11.9884 -0.9150 -2.4426 17 6 13.1880 -0.6610 -3.0788 18 6 13.6797 -1.5548 -4.0121 19 6 12.9750 -2.7071 -4.3075 20 6 11.7775 -2.9683 -3.6701 21 6 7.8116 -0.9074 0.5758 22 6 4.0668 2.5362 -0.0010 23 6 3.3038 3.6836 -0.0010 24 6 3.9769 5.0319 -0.0021 25 8 4.6983 5.2033 -1.2237 26 14 2.6888 6.3691 0.1511 27 6 1.9207 3.6033 -0.0006 28 6 1.2925 2.3740 -0.0006 29 1 -0.3633 0.5139 0.8900 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3634 -1.0276 0.0005 32 1 6.0357 0.9985 -0.0098 33 1 6.6336 -2.1725 -1.9368 34 1 7.2713 -0.4713 -1.9584 35 1 9.5215 -0.3998 -1.6452 36 1 10.3958 -1.2639 -0.3580 37 1 11.6025 -0.2143 -1.7169 38 1 13.7404 0.2383 -2.8497 39 1 14.6158 -1.3525 -4.5114 40 1 13.3608 -3.4035 -5.0372 41 1 11.2271 -3.8683 -3.9015 42 1 8.1814 0.1160 0.5126 43 1 7.9251 -1.3388 1.5704 44 1 5.1447 2.6036 -0.0013 45 1 4.6671 5.0942 0.8392 46 1 4.1459 5.1595 -2.0161 47 1 3.3398 7.7037 0.1519 48 1 1.7230 6.2752 -0.9730 49 1 1.3305 4.5078 -0.0010 50 1 0.2139 2.3195 -0.0007 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16536076_12496546.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:04 Heat of formation + Delta-G solvation = -53.173028 kcal Electronic energy + Delta-G solvation = -32321.267179 eV Core-core repulsion = 27860.962428 eV Total energy + Delta-G solvation = -4460.304751 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -41.82243 -41.22501 -40.51633 -39.27218 -39.14679 -38.00995 -37.27511 -34.64921 -32.63591 -31.97246 -31.88095 -30.96409 -29.11539 -28.55669 -26.80856 -26.25455 -25.61918 -24.16126 -23.35538 -22.83640 -22.13554 -21.45656 -20.70692 -19.50015 -19.10653 -18.46719 -18.13909 -17.62509 -17.14972 -16.91836 -16.85973 -16.79097 -16.40905 -16.27632 -16.11243 -15.93268 -15.88471 -15.52898 -15.28991 -14.89542 -14.59633 -14.58110 -14.33028 -14.15108 -14.06029 -13.63486 -13.59611 -13.50244 -13.22918 -13.20530 -12.93780 -12.55118 -12.47324 -12.37196 -12.27575 -12.11667 -12.02699 -11.83765 -11.72246 -11.67423 -11.30710 -10.90091 -10.54452 -10.24804 -9.95000 -9.91004 -9.31387 -9.10673 -5.05618 -0.27269 0.16530 0.43311 0.55325 1.18451 1.49025 1.84369 1.88106 2.05992 2.20070 2.29432 2.69903 2.89748 3.26231 3.35172 3.43967 3.48358 3.57060 3.62158 3.71960 3.75924 3.90959 3.93367 3.96546 4.04574 4.17337 4.18615 4.18677 4.23579 4.25619 4.30825 4.33039 4.47089 4.49813 4.55044 4.56264 4.57221 4.61784 4.66515 4.73121 4.78945 4.86539 4.93861 5.02065 5.04195 5.09915 5.20253 5.24006 5.39435 5.46903 5.51148 5.57227 5.65098 5.86882 6.26820 6.30286 6.50452 6.55702 7.34241 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.194 3.806 4 C -0.175 4.175 5 C 0.562 3.438 6 O -0.515 6.515 7 N -0.721 5.721 8 C 0.127 3.873 9 H 0.120 0.880 10 C -0.145 4.145 11 C -0.107 4.107 12 H 0.108 0.892 13 C 0.072 3.928 14 O -0.312 6.312 15 C 0.130 3.870 16 C -0.211 4.211 17 C -0.081 4.081 18 C -0.160 4.160 19 C -0.080 4.080 20 C -0.153 4.153 21 C -0.136 4.136 22 C -0.019 4.019 23 C -0.167 4.167 24 C -0.069 4.069 25 O -0.530 6.530 26 Si 0.683 3.317 27 C -0.049 4.049 28 C -0.214 4.214 29 H 0.059 0.941 30 H 0.058 0.942 31 H 0.105 0.895 32 H 0.399 0.601 33 H 0.078 0.922 34 H 0.086 0.914 35 H 0.064 0.936 36 H 0.065 0.935 37 H 0.126 0.874 38 H 0.125 0.875 39 H 0.124 0.876 40 H 0.130 0.870 41 H 0.130 0.870 42 H 0.089 0.911 43 H 0.083 0.917 44 H 0.135 0.865 45 H 0.119 0.881 46 H 0.377 0.623 47 H -0.256 1.256 48 H -0.260 1.260 49 H 0.134 0.866 50 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.234 3.811 2.302 4.620 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.145 3.855 4 C -0.179 4.179 5 C 0.350 3.650 6 O -0.390 6.390 7 N -0.373 5.373 8 C 0.022 3.978 9 H 0.138 0.862 10 C -0.184 4.184 11 C -0.126 4.126 12 H 0.126 0.874 13 C -0.003 4.003 14 O -0.226 6.226 15 C 0.084 3.916 16 C -0.230 4.230 17 C -0.099 4.099 18 C -0.178 4.178 19 C -0.098 4.098 20 C -0.172 4.172 21 C -0.175 4.175 22 C -0.038 4.038 23 C -0.168 4.168 24 C -0.179 4.179 25 O -0.337 6.337 26 Si 0.585 3.415 27 C -0.066 4.066 28 C -0.233 4.233 29 H 0.078 0.922 30 H 0.076 0.924 31 H 0.124 0.876 32 H 0.234 0.766 33 H 0.097 0.903 34 H 0.104 0.896 35 H 0.082 0.918 36 H 0.083 0.917 37 H 0.144 0.856 38 H 0.142 0.858 39 H 0.142 0.858 40 H 0.147 0.853 41 H 0.148 0.852 42 H 0.108 0.892 43 H 0.102 0.898 44 H 0.152 0.848 45 H 0.137 0.863 46 H 0.224 0.776 47 H -0.181 1.181 48 H -0.185 1.185 49 H 0.152 0.848 50 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.582 3.398 2.335 4.416 hybrid contribution 0.334 0.551 -1.070 1.249 sum -1.248 3.949 1.265 4.330 Atomic orbital electron populations 1.23240 0.78161 1.04794 1.01453 1.86384 1.21221 1.25184 1.86130 1.19104 0.90954 0.85076 0.90393 1.19352 0.90924 0.93923 1.13733 1.17981 0.81958 0.88653 0.76405 1.90845 1.71488 1.28608 1.48085 1.45872 1.05870 1.09370 1.76216 1.22455 0.89756 0.88783 0.96837 0.86231 1.23568 0.95540 1.02207 0.97108 1.22362 0.92117 1.01362 0.96760 0.87393 1.22812 0.95656 0.91285 0.90593 1.86083 1.35154 1.47530 1.53837 1.19037 0.85594 0.93951 0.92983 1.21269 0.98187 0.98418 1.05098 1.20989 0.94803 0.98949 0.95123 1.21116 1.01103 0.95469 1.00119 1.21024 0.93636 0.96943 0.98230 1.20496 0.97817 1.00455 0.98442 1.23368 0.94831 1.00499 0.98768 1.20965 0.99816 0.89862 0.93158 1.20053 0.93540 0.95902 1.07264 1.24934 1.04059 0.99025 0.89848 1.86599 1.37449 1.94238 1.15379 0.95014 0.78810 0.77666 0.90027 1.21042 0.93799 0.97482 0.94315 1.21234 1.00753 0.91556 1.09719 0.92221 0.92362 0.87633 0.76587 0.90346 0.89552 0.91813 0.91691 0.85586 0.85750 0.85809 0.85256 0.85162 0.89225 0.89800 0.84771 0.86301 0.77562 1.18075 1.18484 0.84838 0.84141 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.96 8.57 -40.55 -0.35 -1.31 16 3 C 0.19 0.43 6.70 -38.70 -0.26 0.17 16 4 C -0.18 -0.36 5.89 -104.84 -0.62 -0.97 16 5 C 0.56 1.98 7.76 -12.47 -0.10 1.88 16 6 O -0.51 -3.81 14.76 -16.59 -0.24 -4.05 16 7 N -0.72 -0.17 5.31 -54.06 -0.29 -0.46 16 8 C 0.13 0.00 4.24 -67.12 -0.28 -0.28 16 9 H 0.12 0.21 7.46 -51.93 -0.39 -0.18 16 10 C -0.15 0.01 7.43 -25.91 -0.19 -0.18 16 11 C -0.11 0.11 4.01 -89.80 -0.36 -0.25 16 12 H 0.11 -0.07 8.14 -51.93 -0.42 -0.49 16 13 C 0.07 -0.03 4.58 37.16 0.17 0.14 16 14 O -0.31 -0.79 10.14 -19.43 -0.20 -0.99 16 15 C 0.13 0.35 6.69 -39.22 -0.26 0.09 16 16 C -0.21 -0.33 9.04 -39.43 -0.36 -0.68 16 17 C -0.08 -0.09 10.04 -39.61 -0.40 -0.49 16 18 C -0.16 -0.18 10.04 -39.56 -0.40 -0.57 16 19 C -0.08 -0.10 10.04 -39.60 -0.40 -0.50 16 20 C -0.15 -0.36 9.99 -39.43 -0.39 -0.75 16 21 C -0.14 0.31 7.39 -25.92 -0.19 0.11 16 22 C -0.02 0.01 9.16 -39.20 -0.36 -0.35 16 23 C -0.17 0.18 5.35 -104.67 -0.56 -0.38 16 24 C -0.07 0.12 2.79 36.01 0.10 0.22 16 25 O -0.53 0.15 12.83 -35.23 -0.45 -0.31 16 26 Si 0.68 -1.45 29.87 -169.99 -5.08 -6.53 16 27 C -0.05 0.07 8.65 -39.54 -0.34 -0.28 16 28 C -0.21 0.09 9.03 -39.48 -0.36 -0.27 16 29 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 30 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 31 H 0.11 -0.19 8.14 -51.93 -0.42 -0.61 16 32 H 0.40 -0.92 6.76 -40.82 -0.28 -1.19 16 33 H 0.08 0.10 8.14 -51.93 -0.42 -0.33 16 34 H 0.09 -0.03 7.90 -51.93 -0.41 -0.44 16 35 H 0.06 -0.07 7.35 -51.93 -0.38 -0.46 16 36 H 0.06 -0.08 7.67 -51.93 -0.40 -0.48 16 37 H 0.13 -0.04 6.30 -52.49 -0.33 -0.37 16 38 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 39 H 0.12 -0.09 8.06 -52.48 -0.42 -0.51 16 40 H 0.13 -0.11 8.06 -52.49 -0.42 -0.53 16 41 H 0.13 0.18 8.06 -52.49 -0.42 -0.25 16 42 H 0.09 -0.32 8.08 -51.93 -0.42 -0.74 16 43 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 44 H 0.13 -0.32 6.40 -52.49 -0.34 -0.66 16 45 H 0.12 -0.32 7.96 -51.93 -0.41 -0.73 16 46 H 0.38 -1.04 8.70 45.56 0.40 -0.65 16 47 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 48 H -0.26 0.07 7.00 56.52 0.40 0.46 16 49 H 0.13 -0.44 4.81 -52.49 -0.25 -0.69 16 50 H 0.14 -0.36 6.30 -52.49 -0.33 -0.69 16 LS Contribution 410.02 15.07 6.18 6.18 Total: 0.00 -9.65 410.02 -11.91 -21.56 By element: Atomic # 1 Polarization: -4.80 SS G_CDS: -6.92 Total: -11.72 kcal Atomic # 6 Polarization: 2.19 SS G_CDS: -4.56 Total: -2.37 kcal Atomic # 7 Polarization: -0.17 SS G_CDS: -0.29 Total: -0.46 kcal Atomic # 8 Polarization: -5.42 SS G_CDS: -1.24 Total: -6.66 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.08 Total: -6.53 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -9.65 -11.91 -21.56 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16536076_12496546.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -31.610 kcal (2) G-P(sol) polarization free energy of solvation -9.653 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.263 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.910 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.563 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.173 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds