Wall clock time and date at job start Tue Mar 9 2021 13:15:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42909 * 1 3 3 Si 1.86299 * 109.47243 * 2 1 4 4 C 1.50696 * 109.47263 * 120.00279 * 2 1 3 5 5 C 1.38627 * 119.94171 * 194.97479 * 4 2 1 6 6 F 1.35105 * 119.88249 * 0.02562 * 5 4 2 7 7 C 1.38673 * 120.24116 * 180.02562 * 5 4 2 8 8 C 1.37822 * 120.11735 * 359.70422 * 7 5 4 9 9 C 1.39665 * 119.87640 * 0.54861 * 8 7 5 10 10 C 1.47727 * 120.11335 * 179.74824 * 9 8 7 11 11 O 1.21571 * 119.99450 * 179.72242 * 10 9 8 12 12 N 1.34770 * 120.00414 * 359.72503 * 10 9 8 13 13 C 1.46497 * 120.00303 * 179.97438 * 12 10 9 14 14 H 1.08998 * 112.85022 * 23.80240 * 13 12 10 15 15 C 1.53784 * 113.61794 * 154.99821 * 13 12 10 16 16 C 1.53781 * 87.08302 * 139.98241 * 15 13 12 17 17 H 1.08995 * 113.61216 * 89.19983 * 16 15 13 18 18 C 1.53003 * 113.61412 * 220.02167 * 16 15 13 19 19 O 1.42900 * 109.46808 * 185.00002 * 18 16 15 20 20 C 1.35905 * 116.99657 * 179.97438 * 19 18 16 21 21 C 1.38737 * 120.05306 * 179.97438 * 20 19 18 22 22 C 1.38141 * 119.94079 * 179.97438 * 21 20 19 23 23 C 1.38269 * 120.05690 * 359.97438 * 22 21 20 24 24 C 1.38263 * 120.11156 * 0.27879 * 23 22 21 25 25 C 1.38143 * 120.05579 * 359.44992 * 24 23 22 26 26 C 1.53778 * 113.61816 * 252.49772 * 13 12 10 27 27 C 1.37855 * 119.93912 * 14.99879 * 4 2 1 28 28 H 0.96694 * 113.99862 * 59.99447 * 1 2 3 29 29 H 1.09008 * 109.46660 * 240.00237 * 2 1 3 30 30 H 1.48497 * 109.99997 * 60.00390 * 3 2 1 31 31 H 1.48502 * 110.00102 * 181.32412 * 3 2 1 32 32 H 1.08002 * 119.94284 * 179.97438 * 7 5 4 33 33 H 1.08001 * 120.05739 * 180.27442 * 8 7 5 34 34 H 0.97005 * 120.00199 * 0.02562 * 12 10 9 35 35 H 1.09005 * 113.60878 * 25.43419 * 15 13 12 36 36 H 1.09004 * 113.61363 * 254.53154 * 15 13 12 37 37 H 1.09002 * 109.46910 * 65.00017 * 18 16 15 38 38 H 1.08999 * 109.47085 * 304.99772 * 18 16 15 39 39 H 1.07999 * 120.02432 * 359.95516 * 21 20 19 40 40 H 1.07998 * 119.97174 * 179.97438 * 22 21 20 41 41 H 1.08002 * 119.94064 * 179.97438 * 23 22 21 42 42 H 1.08001 * 119.97271 * 179.71681 * 24 23 22 43 43 H 1.08006 * 120.03125 * 180.27333 * 25 24 23 44 44 H 1.09000 * 113.61701 * 105.46318 * 26 13 12 45 45 H 1.09004 * 113.61456 * 334.57002 * 26 13 12 46 46 H 1.07997 * 120.06364 * 359.95221 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 3.2562 -0.5744 1.6155 6 9 4.0934 0.1956 0.8865 7 6 3.7252 -1.2258 2.7463 8 6 2.8739 -2.0076 3.4971 9 6 1.5397 -2.1524 3.1106 10 6 0.6241 -2.9936 3.9083 11 8 -0.5382 -3.1141 3.5728 12 7 1.0772 -3.6275 5.0080 13 6 0.1690 -4.4612 5.7994 14 1 -0.6806 -4.8268 5.2227 15 6 0.8846 -5.5584 6.6050 16 6 -0.0929 -5.2453 7.7502 17 1 -1.0143 -5.8260 7.7087 18 6 0.5589 -5.2630 9.1343 19 8 -0.4440 -5.0778 10.1354 20 6 -0.0294 -5.0687 11.4296 21 6 -0.9498 -4.8930 12.4527 22 6 -0.5260 -4.8846 13.7675 23 6 0.8141 -5.0518 14.0642 24 6 1.7340 -5.2218 13.0461 25 6 1.3145 -5.2366 11.7300 26 6 -0.2231 -3.8361 7.1485 27 6 1.0729 -1.4949 1.9706 28 1 -0.3933 0.4418 -0.7650 29 1 1.7924 -0.5138 -0.8901 30 1 1.5617 2.4678 1.2085 31 1 3.5347 1.7703 -0.0322 32 1 4.7583 -1.1167 3.0417 33 1 3.2392 -2.5109 4.3801 34 1 2.0045 -3.5310 5.2760 35 1 1.9223 -5.3213 6.8396 36 1 0.7617 -6.5576 6.1869 37 1 1.2918 -4.4589 9.2011 38 1 1.0552 -6.2209 9.2900 39 1 -1.9967 -4.7625 12.2214 40 1 -1.2420 -4.7475 14.5643 41 1 1.1434 -5.0445 15.0928 42 1 2.7808 -5.3476 13.2802 43 1 2.0329 -5.3739 10.9352 44 1 -1.2402 -3.4447 7.1693 45 1 0.5118 -3.1281 7.5317 46 1 0.0410 -1.5999 1.6700 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16536076_12496548.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:07 Heat of formation + Delta-G solvation = -56.590038 kcal Electronic energy + Delta-G solvation = -29970.560230 eV Core-core repulsion = 25514.873141 eV Total energy + Delta-G solvation = -4455.687088 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -50.48041 -41.67406 -41.09204 -40.25302 -39.15039 -38.07858 -37.68269 -34.89303 -32.95131 -32.10894 -31.92885 -31.00508 -29.14189 -27.11624 -26.90091 -25.59373 -24.02111 -23.35548 -23.24673 -22.47977 -21.53496 -20.74846 -19.28866 -19.17262 -18.82944 -18.31861 -17.84077 -17.46259 -17.09354 -16.95360 -16.83232 -16.55917 -16.24970 -16.13060 -15.85251 -15.76890 -15.37983 -15.22009 -15.11366 -14.75098 -14.40523 -14.35187 -14.27169 -14.14025 -13.68812 -13.64942 -13.40096 -13.18806 -13.03695 -12.77353 -12.60946 -12.44486 -12.24793 -12.10102 -11.91128 -11.73770 -11.60538 -11.38822 -11.03239 -10.94547 -10.21478 -10.05844 -9.94852 -9.71263 -9.14789 -4.97565 -0.56642 -0.04166 0.39558 0.51449 1.20428 1.61905 1.67118 1.91992 1.99376 2.19508 2.55148 2.80475 2.85953 3.01890 3.25048 3.34726 3.35560 3.50571 3.63496 3.65365 3.69257 3.86223 3.88008 3.91677 4.07194 4.11636 4.16319 4.20546 4.25593 4.26458 4.44206 4.46186 4.48311 4.51504 4.58507 4.65189 4.70005 4.73334 4.77003 4.84005 4.94002 5.00281 5.04968 5.06242 5.13154 5.35215 5.40572 5.47399 5.53726 5.61574 5.82894 6.34810 6.45950 6.50378 7.10139 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.069 4.069 3 Si 0.676 3.324 4 C -0.118 4.118 5 C 0.108 3.892 6 F -0.117 7.117 7 C -0.151 4.151 8 C -0.061 4.061 9 C -0.145 4.145 10 C 0.563 3.437 11 O -0.526 6.526 12 N -0.717 5.717 13 C 0.124 3.876 14 H 0.122 0.878 15 C -0.136 4.136 16 C -0.107 4.107 17 H 0.109 0.891 18 C 0.072 3.928 19 O -0.312 6.312 20 C 0.129 3.871 21 C -0.153 4.153 22 C -0.080 4.080 23 C -0.159 4.159 24 C -0.081 4.081 25 C -0.211 4.211 26 C -0.145 4.145 27 C -0.005 4.005 28 H 0.389 0.611 29 H 0.085 0.915 30 H -0.258 1.258 31 H -0.229 1.229 32 H 0.148 0.852 33 H 0.138 0.862 34 H 0.400 0.600 35 H 0.090 0.910 36 H 0.084 0.916 37 H 0.063 0.937 38 H 0.065 0.935 39 H 0.131 0.869 40 H 0.130 0.870 41 H 0.124 0.876 42 H 0.125 0.875 43 H 0.126 0.874 44 H 0.079 0.921 45 H 0.087 0.913 46 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.812 -0.339 -0.611 3.876 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.179 4.179 3 Si 0.575 3.425 4 C -0.119 4.119 5 C 0.088 3.912 6 F -0.096 7.096 7 C -0.170 4.170 8 C -0.080 4.080 9 C -0.149 4.149 10 C 0.350 3.650 11 O -0.402 6.402 12 N -0.368 5.368 13 C 0.019 3.981 14 H 0.139 0.861 15 C -0.174 4.174 16 C -0.126 4.126 17 H 0.127 0.873 18 C -0.003 4.003 19 O -0.226 6.226 20 C 0.084 3.916 21 C -0.172 4.172 22 C -0.098 4.098 23 C -0.178 4.178 24 C -0.099 4.099 25 C -0.230 4.230 26 C -0.184 4.184 27 C -0.023 4.023 28 H 0.238 0.762 29 H 0.103 0.897 30 H -0.182 1.182 31 H -0.154 1.154 32 H 0.166 0.834 33 H 0.156 0.844 34 H 0.236 0.764 35 H 0.108 0.892 36 H 0.103 0.897 37 H 0.082 0.918 38 H 0.083 0.917 39 H 0.149 0.851 40 H 0.148 0.852 41 H 0.142 0.858 42 H 0.143 0.857 43 H 0.144 0.856 44 H 0.098 0.902 45 H 0.105 0.895 46 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges 3.378 -0.103 0.004 3.380 hybrid contribution 1.042 -0.461 0.311 1.181 sum 4.419 -0.564 0.315 4.466 Atomic orbital electron populations 1.86398 1.16615 1.81954 1.50115 1.24546 0.86322 1.10468 0.96528 0.95898 0.80977 0.76135 0.89477 1.19424 0.92057 1.01029 0.99383 1.17764 0.87475 0.93922 0.91991 1.91500 1.70821 1.71368 1.75880 1.21044 1.01795 0.99454 0.94711 1.21165 0.91933 0.96208 0.98646 1.20055 0.94255 1.02280 0.98278 1.18128 0.87337 0.79278 0.80223 1.90825 1.17571 1.62292 1.69549 1.45869 1.14072 1.49631 1.27245 1.22531 0.94041 0.91018 0.90498 0.86060 1.23370 0.99127 0.99881 0.95058 1.22360 1.00438 0.98714 0.91071 0.87302 1.22803 0.90273 1.01133 0.86131 1.86085 1.36584 1.87337 1.12599 1.19036 0.92710 0.96014 0.83844 1.20500 0.99528 1.06085 0.91058 1.21031 0.96099 0.97131 0.95546 1.21122 0.93382 1.03747 0.99509 1.20988 0.99764 0.97069 0.92054 1.21261 0.94688 1.08929 0.98107 1.23570 1.03392 0.96307 0.95149 1.21002 1.00924 0.89974 0.90445 0.76239 0.89741 1.18236 1.15353 0.83440 0.84384 0.76421 0.89197 0.89697 0.91835 0.91658 0.85140 0.85225 0.85783 0.85749 0.85617 0.90198 0.89497 0.82316 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.07 11.48 -35.23 -0.40 -0.47 16 2 C -0.07 -0.02 2.95 36.00 0.11 0.09 16 3 Si 0.68 -0.19 30.73 -169.99 -5.22 -5.41 16 4 C -0.12 -0.26 5.15 -104.62 -0.54 -0.80 16 5 C 0.11 0.19 6.67 -39.28 -0.26 -0.07 16 6 F -0.12 -0.29 12.86 2.25 0.03 -0.26 16 7 C -0.15 0.05 10.01 -39.57 -0.40 -0.35 16 8 C -0.06 0.06 9.54 -39.20 -0.37 -0.31 16 9 C -0.15 -0.23 5.87 -104.97 -0.62 -0.85 16 10 C 0.56 1.42 7.77 -12.39 -0.10 1.32 16 11 O -0.53 -3.38 15.94 5.30 0.08 -3.29 16 12 N -0.72 0.61 5.30 -54.00 -0.29 0.33 16 13 C 0.12 -0.11 4.24 -67.12 -0.28 -0.39 16 14 H 0.12 0.10 7.46 -51.93 -0.39 -0.29 16 15 C -0.14 0.42 7.39 -25.92 -0.19 0.23 16 16 C -0.11 0.18 4.01 -89.81 -0.36 -0.18 16 17 H 0.11 -0.13 8.14 -51.93 -0.42 -0.56 16 18 C 0.07 -0.07 4.58 37.16 0.17 0.10 16 19 O -0.31 -0.64 10.14 -19.44 -0.20 -0.84 16 20 C 0.13 0.30 6.69 -39.21 -0.26 0.04 16 21 C -0.15 -0.30 9.99 -39.43 -0.39 -0.70 16 22 C -0.08 -0.08 10.04 -39.61 -0.40 -0.48 16 23 C -0.16 -0.12 10.04 -39.56 -0.40 -0.52 16 24 C -0.08 -0.06 10.04 -39.61 -0.40 -0.46 16 25 C -0.21 -0.23 9.04 -39.43 -0.36 -0.59 16 26 C -0.15 0.13 7.43 -25.92 -0.19 -0.07 16 27 C 0.00 -0.01 8.91 -39.20 -0.35 -0.36 16 28 H 0.39 -1.90 8.74 45.56 0.40 -1.50 16 29 H 0.08 -0.12 7.96 -51.92 -0.41 -0.53 16 30 H -0.26 -0.93 7.11 56.52 0.40 -0.53 16 31 H -0.23 -0.45 5.40 56.52 0.30 -0.14 16 32 H 0.15 -0.38 8.06 -52.49 -0.42 -0.81 16 33 H 0.14 -0.63 6.40 -52.49 -0.34 -0.97 16 34 H 0.40 -1.51 6.76 -40.82 -0.28 -1.79 16 35 H 0.09 -0.40 8.08 -51.93 -0.42 -0.82 16 36 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 37 H 0.06 -0.12 7.37 -51.93 -0.38 -0.50 16 38 H 0.07 -0.12 7.66 -51.93 -0.40 -0.52 16 39 H 0.13 0.13 8.06 -52.49 -0.42 -0.29 16 40 H 0.13 -0.14 8.06 -52.49 -0.42 -0.57 16 41 H 0.12 -0.13 8.06 -52.49 -0.42 -0.55 16 42 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 43 H 0.13 -0.11 6.30 -52.48 -0.33 -0.44 16 44 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 45 H 0.09 -0.11 7.90 -51.93 -0.41 -0.52 16 46 H 0.16 0.65 6.72 -52.49 -0.35 0.30 16 LS Contribution 385.36 15.07 5.81 5.81 Total: 0.00 -9.41 385.36 -11.76 -21.18 By element: Atomic # 1 Polarization: -6.71 SS G_CDS: -5.98 Total: -12.69 kcal Atomic # 6 Polarization: 1.25 SS G_CDS: -5.59 Total: -4.34 kcal Atomic # 7 Polarization: 0.61 SS G_CDS: -0.29 Total: 0.33 kcal Atomic # 8 Polarization: -4.09 SS G_CDS: -0.52 Total: -4.61 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.03 Total: -0.26 kcal Atomic # 14 Polarization: -0.19 SS G_CDS: -5.22 Total: -5.41 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -9.41 -11.76 -21.18 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16536076_12496548.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.413 kcal (2) G-P(sol) polarization free energy of solvation -9.412 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.825 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.765 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.177 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.590 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds