Wall clock time and date at job start Tue Mar 9 2021 13:15:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42909 * 1 3 3 Si 1.86299 * 109.47243 * 2 1 4 4 C 1.50696 * 109.47263 * 120.00279 * 2 1 3 5 5 C 1.38627 * 119.94171 * 194.97479 * 4 2 1 6 6 F 1.35105 * 119.88249 * 0.02562 * 5 4 2 7 7 C 1.38673 * 120.24116 * 180.02562 * 5 4 2 8 8 C 1.37822 * 120.11735 * 359.70422 * 7 5 4 9 9 C 1.39665 * 119.87640 * 0.54861 * 8 7 5 10 10 C 1.47727 * 120.11335 * 179.74824 * 9 8 7 11 11 O 1.21571 * 119.99450 * 179.72242 * 10 9 8 12 12 N 1.34770 * 120.00414 * 359.72503 * 10 9 8 13 13 C 1.46497 * 120.00303 * 179.97438 * 12 10 9 14 14 H 1.08998 * 112.85022 * 23.80240 * 13 12 10 15 15 C 1.53784 * 113.61794 * 154.99821 * 13 12 10 16 16 C 1.53781 * 87.08302 * 139.98241 * 15 13 12 17 17 H 1.08995 * 113.61216 * 89.19983 * 16 15 13 18 18 C 1.53003 * 113.61412 * 220.02167 * 16 15 13 19 19 O 1.42900 * 109.46808 * 185.00002 * 18 16 15 20 20 C 1.35905 * 116.99657 * 179.97438 * 19 18 16 21 21 C 1.38737 * 120.05306 * 179.97438 * 20 19 18 22 22 C 1.38141 * 119.94079 * 179.97438 * 21 20 19 23 23 C 1.38269 * 120.05690 * 359.97438 * 22 21 20 24 24 C 1.38263 * 120.11156 * 0.27879 * 23 22 21 25 25 C 1.38143 * 120.05579 * 359.44992 * 24 23 22 26 26 C 1.53778 * 113.61816 * 252.49772 * 13 12 10 27 27 C 1.37855 * 119.93912 * 14.99879 * 4 2 1 28 28 H 0.96694 * 113.99862 * 59.99447 * 1 2 3 29 29 H 1.09008 * 109.46660 * 240.00237 * 2 1 3 30 30 H 1.48497 * 109.99997 * 60.00390 * 3 2 1 31 31 H 1.48502 * 110.00102 * 181.32412 * 3 2 1 32 32 H 1.08002 * 119.94284 * 179.97438 * 7 5 4 33 33 H 1.08001 * 120.05739 * 180.27442 * 8 7 5 34 34 H 0.97005 * 120.00199 * 0.02562 * 12 10 9 35 35 H 1.09005 * 113.60878 * 25.43419 * 15 13 12 36 36 H 1.09004 * 113.61363 * 254.53154 * 15 13 12 37 37 H 1.09002 * 109.46910 * 65.00017 * 18 16 15 38 38 H 1.08999 * 109.47085 * 304.99772 * 18 16 15 39 39 H 1.07999 * 120.02432 * 359.95516 * 21 20 19 40 40 H 1.07998 * 119.97174 * 179.97438 * 22 21 20 41 41 H 1.08002 * 119.94064 * 179.97438 * 23 22 21 42 42 H 1.08001 * 119.97271 * 179.71681 * 24 23 22 43 43 H 1.08006 * 120.03125 * 180.27333 * 25 24 23 44 44 H 1.09000 * 113.61701 * 105.46318 * 26 13 12 45 45 H 1.09004 * 113.61456 * 334.57002 * 26 13 12 46 46 H 1.07997 * 120.06364 * 359.95221 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 3.2562 -0.5744 1.6155 6 9 4.0934 0.1956 0.8865 7 6 3.7252 -1.2258 2.7463 8 6 2.8739 -2.0076 3.4971 9 6 1.5397 -2.1524 3.1106 10 6 0.6241 -2.9936 3.9083 11 8 -0.5382 -3.1141 3.5728 12 7 1.0772 -3.6275 5.0080 13 6 0.1690 -4.4612 5.7994 14 1 -0.6806 -4.8268 5.2227 15 6 0.8846 -5.5584 6.6050 16 6 -0.0929 -5.2453 7.7502 17 1 -1.0143 -5.8260 7.7087 18 6 0.5589 -5.2630 9.1343 19 8 -0.4440 -5.0778 10.1354 20 6 -0.0294 -5.0687 11.4296 21 6 -0.9498 -4.8930 12.4527 22 6 -0.5260 -4.8846 13.7675 23 6 0.8141 -5.0518 14.0642 24 6 1.7340 -5.2218 13.0461 25 6 1.3145 -5.2366 11.7300 26 6 -0.2231 -3.8361 7.1485 27 6 1.0729 -1.4949 1.9706 28 1 -0.3933 0.4418 -0.7650 29 1 1.7924 -0.5138 -0.8901 30 1 1.5617 2.4678 1.2085 31 1 3.5347 1.7703 -0.0322 32 1 4.7583 -1.1167 3.0417 33 1 3.2392 -2.5109 4.3801 34 1 2.0045 -3.5310 5.2760 35 1 1.9223 -5.3213 6.8396 36 1 0.7617 -6.5576 6.1869 37 1 1.2918 -4.4589 9.2011 38 1 1.0552 -6.2209 9.2900 39 1 -1.9967 -4.7625 12.2214 40 1 -1.2420 -4.7475 14.5643 41 1 1.1434 -5.0445 15.0928 42 1 2.7808 -5.3476 13.2802 43 1 2.0329 -5.3739 10.9352 44 1 -1.2402 -3.4447 7.1693 45 1 0.5118 -3.1281 7.5317 46 1 0.0410 -1.5999 1.6700 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16536076_12496548.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:06 Heat of formation + Delta-G solvation = -54.485008 kcal Electronic energy + Delta-G solvation = -29970.468949 eV Core-core repulsion = 25514.873141 eV Total energy + Delta-G solvation = -4455.595807 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -50.59682 -41.72730 -41.12327 -40.24304 -39.23911 -38.09813 -37.68864 -34.99475 -32.96679 -32.14894 -31.95792 -31.01000 -29.11103 -27.12806 -26.77043 -25.65109 -24.03394 -23.38366 -23.27438 -22.46763 -21.61340 -20.68037 -19.31423 -19.19858 -18.86451 -18.36488 -17.85785 -17.53843 -17.11727 -16.93005 -16.86341 -16.62950 -16.27536 -16.15952 -15.90656 -15.82937 -15.39206 -15.27323 -15.11039 -14.84793 -14.39485 -14.36465 -14.28551 -14.13125 -13.79917 -13.50583 -13.40639 -13.23251 -13.00832 -12.83890 -12.58663 -12.41161 -12.25323 -12.06284 -11.85390 -11.76574 -11.66976 -11.34287 -11.17955 -10.97408 -10.31127 -10.08722 -9.97936 -9.73573 -9.18965 -4.99570 -0.64821 -0.07754 0.36636 0.46871 1.18560 1.51270 1.60947 1.89745 1.93115 2.22401 2.46807 2.80245 2.82404 3.03053 3.33616 3.39369 3.46304 3.51452 3.68461 3.72434 3.75681 3.88430 3.92253 3.95412 4.09550 4.21875 4.24483 4.28328 4.29222 4.35211 4.46895 4.48714 4.53686 4.65644 4.68278 4.69169 4.72630 4.76736 4.79153 4.93390 4.95859 4.97639 5.00804 5.06034 5.15952 5.32904 5.44482 5.46121 5.51053 5.59153 5.84343 6.36382 6.45482 6.78887 7.02927 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.078 4.078 3 Si 0.766 3.234 4 C -0.135 4.135 5 C 0.090 3.910 6 F -0.124 7.124 7 C -0.145 4.145 8 C -0.046 4.046 9 C -0.154 4.154 10 C 0.560 3.440 11 O -0.577 6.577 12 N -0.697 5.697 13 C 0.116 3.884 14 H 0.098 0.902 15 C -0.116 4.116 16 C -0.104 4.104 17 H 0.098 0.902 18 C 0.068 3.932 19 O -0.333 6.333 20 C 0.112 3.888 21 C -0.176 4.176 22 C -0.088 4.088 23 C -0.169 4.169 24 C -0.088 4.088 25 C -0.217 4.217 26 C -0.146 4.146 27 C -0.026 4.026 28 H 0.408 0.592 29 H 0.103 0.897 30 H -0.314 1.314 31 H -0.257 1.257 32 H 0.177 0.823 33 H 0.181 0.819 34 H 0.418 0.582 35 H 0.116 0.884 36 H 0.091 0.909 37 H 0.076 0.924 38 H 0.077 0.923 39 H 0.129 0.871 40 H 0.145 0.855 41 H 0.141 0.859 42 H 0.145 0.855 43 H 0.145 0.855 44 H 0.057 0.943 45 H 0.097 0.903 46 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.434 -1.024 0.192 6.518 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.187 4.187 3 Si 0.671 3.329 4 C -0.136 4.136 5 C 0.070 3.930 6 F -0.103 7.103 7 C -0.163 4.163 8 C -0.064 4.064 9 C -0.158 4.158 10 C 0.348 3.652 11 O -0.457 6.457 12 N -0.349 5.349 13 C 0.011 3.989 14 H 0.116 0.884 15 C -0.153 4.153 16 C -0.123 4.123 17 H 0.116 0.884 18 C -0.006 4.006 19 O -0.247 6.247 20 C 0.067 3.933 21 C -0.194 4.194 22 C -0.106 4.106 23 C -0.187 4.187 24 C -0.106 4.106 25 C -0.235 4.235 26 C -0.185 4.185 27 C -0.045 4.045 28 H 0.260 0.740 29 H 0.121 0.879 30 H -0.243 1.243 31 H -0.183 1.183 32 H 0.194 0.806 33 H 0.198 0.802 34 H 0.257 0.743 35 H 0.135 0.865 36 H 0.110 0.890 37 H 0.095 0.905 38 H 0.096 0.904 39 H 0.147 0.853 40 H 0.163 0.837 41 H 0.159 0.841 42 H 0.163 0.837 43 H 0.163 0.837 44 H 0.076 0.924 45 H 0.115 0.885 46 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 6.023 -0.807 0.794 6.128 hybrid contribution 0.213 -0.227 0.131 0.338 sum 6.235 -1.034 0.925 6.388 Atomic orbital electron populations 1.86377 1.16720 1.82486 1.51685 1.24729 0.86478 1.10833 0.96633 0.94987 0.77853 0.73684 0.86426 1.19672 0.92505 1.01297 1.00169 1.18041 0.87332 0.94636 0.92945 1.91485 1.70879 1.71686 1.76213 1.21437 1.03190 0.98184 0.93505 1.21543 0.90262 0.95257 0.99352 1.20102 0.95425 1.02300 0.97950 1.18363 0.86794 0.79248 0.80799 1.90799 1.19710 1.64190 1.71018 1.45734 1.14905 1.48326 1.25901 1.22524 0.94121 0.92063 0.90163 0.88417 1.23313 0.99849 0.99204 0.92982 1.22298 1.00667 0.97839 0.91483 0.88360 1.22984 0.90040 1.02251 0.85354 1.86061 1.38112 1.87527 1.13015 1.19256 0.93445 0.96664 0.83979 1.20706 0.99770 1.07103 0.91837 1.21287 0.96855 0.96848 0.95578 1.21430 0.93334 1.03405 1.00564 1.21327 1.00879 0.96454 0.91924 1.21515 0.94500 1.08538 0.98972 1.23578 1.02444 0.97084 0.95370 1.20894 1.00256 0.91545 0.91810 0.73964 0.87926 1.24279 1.18294 0.80569 0.80223 0.74323 0.86536 0.89002 0.90539 0.90436 0.85325 0.83719 0.84132 0.83708 0.83721 0.92412 0.88486 0.84584 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.97 11.48 -148.98 -1.71 -2.68 16 2 C -0.08 -0.11 2.95 71.23 0.21 0.10 16 3 Si 0.77 0.30 30.73 68.60 2.11 2.41 16 4 C -0.14 -0.76 5.15 -19.86 -0.10 -0.86 16 5 C 0.09 0.31 6.67 22.47 0.15 0.46 16 6 F -0.12 -0.63 12.86 44.97 0.58 -0.05 16 7 C -0.14 0.33 10.01 22.28 0.22 0.56 16 8 C -0.05 0.18 9.54 22.52 0.21 0.39 16 9 C -0.15 -0.56 5.87 -20.09 -0.12 -0.68 16 10 C 0.56 3.39 7.77 86.75 0.67 4.07 16 11 O -0.58 -9.04 15.94 -3.94 -0.06 -9.10 16 12 N -0.70 1.61 5.30 -443.03 -2.35 -0.74 16 13 C 0.12 -0.18 4.24 45.52 0.19 0.01 16 14 H 0.10 0.36 7.46 -2.39 -0.02 0.34 16 15 C -0.12 0.89 7.39 31.12 0.23 1.12 16 16 C -0.10 0.38 4.01 -10.27 -0.04 0.34 16 17 H 0.10 -0.14 8.14 -2.39 -0.02 -0.16 16 18 C 0.07 -0.20 4.58 71.98 0.33 0.13 16 19 O -0.33 -1.53 10.14 -92.48 -0.94 -2.47 16 20 C 0.11 0.55 6.69 22.51 0.15 0.70 16 21 C -0.18 -0.86 9.99 22.37 0.22 -0.64 16 22 C -0.09 -0.19 10.04 22.25 0.22 0.04 16 23 C -0.17 -0.15 10.04 22.28 0.22 0.08 16 24 C -0.09 -0.03 10.04 22.25 0.22 0.20 16 25 C -0.22 -0.29 9.04 22.37 0.20 -0.09 16 26 C -0.15 0.19 7.43 31.12 0.23 0.42 16 27 C -0.03 -0.20 8.91 22.52 0.20 0.00 16 28 H 0.41 -3.68 8.74 -74.06 -0.65 -4.33 16 29 H 0.10 -0.27 7.96 -2.38 -0.02 -0.29 16 30 H -0.31 -3.06 7.11 99.48 0.71 -2.35 16 31 H -0.26 -1.18 5.40 99.48 0.54 -0.64 16 32 H 0.18 -1.46 8.06 -2.91 -0.02 -1.48 16 33 H 0.18 -2.35 6.40 -2.91 -0.02 -2.37 16 34 H 0.42 -4.21 6.76 -92.70 -0.63 -4.84 16 35 H 0.12 -1.47 8.08 -2.38 -0.02 -1.49 16 36 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 37 H 0.08 -0.43 7.37 -2.39 -0.02 -0.45 16 38 H 0.08 -0.42 7.66 -2.39 -0.02 -0.44 16 39 H 0.13 0.50 8.06 -2.91 -0.02 0.48 16 40 H 0.15 -0.31 8.06 -2.91 -0.02 -0.33 16 41 H 0.14 -0.45 8.06 -2.91 -0.02 -0.47 16 42 H 0.15 -0.65 8.06 -2.91 -0.02 -0.67 16 43 H 0.15 -0.51 6.30 -2.91 -0.02 -0.53 16 44 H 0.06 0.19 8.14 -2.39 -0.02 0.17 16 45 H 0.10 -0.32 7.90 -2.38 -0.02 -0.34 16 46 H 0.14 1.60 6.72 -2.91 -0.02 1.58 16 Total: 0.00 -26.57 385.36 0.89 -25.67 By element: Atomic # 1 Polarization: -19.01 SS G_CDS: -0.37 Total: -19.38 kcal Atomic # 6 Polarization: 2.70 SS G_CDS: 3.64 Total: 6.34 kcal Atomic # 7 Polarization: 1.61 SS G_CDS: -2.35 Total: -0.74 kcal Atomic # 8 Polarization: -11.53 SS G_CDS: -2.71 Total: -14.24 kcal Atomic # 9 Polarization: -0.63 SS G_CDS: 0.58 Total: -0.05 kcal Atomic # 14 Polarization: 0.30 SS G_CDS: 2.11 Total: 2.41 kcal Total: -26.57 0.89 -25.67 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16536076_12496548.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.812 kcal (2) G-P(sol) polarization free energy of solvation -26.568 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.380 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.895 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.673 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.485 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds