Wall clock time and date at job start Tue Mar 9 2021 13:16:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.38978 * 119.95618 * 2 1 4 4 O 1.35713 * 119.90923 * 359.97438 * 3 2 1 5 5 C 1.39007 * 120.17914 * 179.97438 * 3 2 1 6 6 C 1.50699 * 119.95809 * 179.97438 * 5 3 2 7 7 O 1.42898 * 109.46964 * 285.00109 * 6 5 3 8 8 Si 1.86301 * 109.47146 * 165.00027 * 6 5 3 9 9 C 1.37692 * 120.08560 * 0.27873 * 5 3 2 10 10 C 1.39743 * 119.90910 * 359.49069 * 9 5 3 11 11 C 1.47609 * 120.08866 * 180.23167 * 10 9 5 12 12 O 1.21589 * 119.99690 * 0.24966 * 11 10 9 13 13 N 1.34774 * 120.00154 * 180.25877 * 11 10 9 14 14 C 1.46509 * 119.99792 * 180.02562 * 13 11 10 15 15 H 1.08999 * 112.84592 * 25.32923 * 14 13 11 16 16 C 1.53777 * 113.61088 * 156.52495 * 14 13 11 17 17 C 1.53784 * 87.08042 * 139.97980 * 16 14 13 18 18 H 1.09000 * 113.61453 * 89.11244 * 17 16 14 19 19 C 1.52994 * 113.61565 * 219.93580 * 17 16 14 20 20 O 1.42901 * 109.47130 * 184.99724 * 19 17 16 21 21 C 1.35904 * 116.99845 * 179.97438 * 20 19 17 22 22 C 1.38727 * 120.05653 * 359.72877 * 21 20 19 23 23 C 1.38146 * 119.93915 * 179.74324 * 22 21 20 24 24 C 1.38258 * 120.06049 * 0.50493 * 23 22 21 25 25 C 1.38273 * 120.11097 * 359.77220 * 24 23 22 26 26 C 1.38143 * 120.05280 * 359.97438 * 25 24 23 27 27 C 1.53773 * 113.61027 * 254.13287 * 14 13 11 28 28 C 1.37718 * 119.95602 * 179.97438 * 2 1 3 29 29 H 1.08997 * 109.46529 * 90.00127 * 1 2 3 30 30 H 1.09000 * 109.47220 * 210.00160 * 1 2 3 31 31 H 1.09000 * 109.47082 * 330.00267 * 1 2 3 32 32 H 0.96703 * 113.99939 * 269.98049 * 4 3 2 33 33 H 1.09002 * 109.46959 * 45.00080 * 6 5 3 34 34 H 0.96698 * 113.99898 * 299.99550 * 7 6 5 35 35 H 1.48504 * 110.00019 * 58.68329 * 8 6 5 36 36 H 1.48503 * 110.00152 * 180.02562 * 8 6 5 37 37 H 1.07995 * 120.04012 * 179.72682 * 9 5 3 38 38 H 0.96995 * 120.00167 * 359.97438 * 13 11 10 39 39 H 1.09002 * 113.61692 * 254.52392 * 16 14 13 40 40 H 1.09000 * 113.62002 * 25.34911 * 16 14 13 41 41 H 1.09005 * 109.47049 * 304.99622 * 19 17 16 42 42 H 1.09003 * 109.47563 * 64.99577 * 19 17 16 43 43 H 1.07995 * 120.02904 * 359.97438 * 22 21 20 44 44 H 1.08004 * 119.96762 * 180.23434 * 23 22 21 45 45 H 1.08001 * 119.95058 * 179.74199 * 24 23 22 46 46 H 1.07994 * 119.97148 * 179.97438 * 25 24 23 47 47 H 1.08000 * 120.02476 * 179.97438 * 26 25 24 48 48 H 1.08996 * 113.62034 * 334.56728 * 27 14 13 49 49 H 1.09000 * 113.61449 * 105.47304 * 27 14 13 50 50 H 1.08002 * 120.04754 * 359.97438 * 28 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3778 -0.0005 5 6 3.5911 1.2095 0.0005 6 6 4.3385 2.5181 0.0000 7 8 4.2725 3.1037 -1.3018 8 14 6.1196 2.2161 0.4554 9 6 4.2860 0.0208 -0.0047 10 6 3.5919 -1.1921 0.0002 11 6 4.3328 -2.4687 -0.0003 12 8 5.5487 -2.4659 -0.0003 13 7 3.6617 -3.6374 -0.0008 14 6 4.3972 -4.9045 -0.0007 15 1 5.3946 -4.8148 0.4295 16 6 3.5883 -6.0861 0.5599 17 6 4.2046 -6.9384 -0.5621 18 1 5.1499 -7.4057 -0.2864 19 6 3.2188 -7.9213 -1.1969 20 8 3.9076 -8.7436 -2.1411 21 6 3.1712 -9.6778 -2.7984 22 6 1.8149 -9.8042 -2.5359 23 6 1.0676 -10.7510 -3.2093 24 6 1.6723 -11.5792 -4.1366 25 6 3.0251 -11.4591 -4.3959 26 6 3.7758 -10.5104 -3.7290 27 6 4.3739 -5.6303 -1.3562 28 6 2.1947 -1.1932 0.0005 29 1 -0.3632 0.0000 -1.0277 30 1 -0.3634 -0.8900 0.5139 31 1 -0.3633 0.8900 0.5138 32 1 1.3228 2.7179 -0.8841 33 1 3.8875 3.1945 0.7260 34 1 4.6565 2.5555 -1.9997 35 1 6.7371 1.2704 -0.5087 36 1 6.8675 3.4991 0.4590 37 1 5.3659 0.0259 -0.0088 38 1 2.6917 -3.6397 -0.0006 39 1 3.8971 -6.3914 1.5598 40 1 2.5095 -5.9584 0.4707 41 1 2.7803 -8.5484 -0.4206 42 1 2.4297 -7.3672 -1.7052 43 1 1.3429 -9.1605 -1.8084 44 1 0.0108 -10.8472 -3.0080 45 1 1.0872 -12.3216 -4.6590 46 1 3.4953 -12.1075 -5.1204 47 1 4.8325 -10.4172 -3.9316 48 1 3.5103 -5.3784 -1.9717 49 1 5.3158 -5.5681 -1.9011 50 1 1.6548 -2.1286 0.0014 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16536076_13287732.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:16:03 Heat of formation + Delta-G solvation = -67.341126 kcal Electronic energy + Delta-G solvation = -32076.942339 eV Core-core repulsion = 27616.023213 eV Total energy + Delta-G solvation = -4460.919126 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.166 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -41.84086 -41.28169 -40.68706 -39.48306 -38.11294 -37.96019 -37.49412 -34.86757 -34.04231 -32.10182 -31.83386 -30.97939 -29.11616 -28.12835 -26.92258 -26.90702 -25.44213 -23.97121 -23.29895 -22.54044 -22.07409 -21.56718 -20.74437 -19.64118 -19.22015 -18.70802 -18.15684 -17.79811 -17.16431 -16.97746 -16.87437 -16.60766 -16.47759 -16.20560 -16.06036 -15.84082 -15.73385 -15.39493 -15.22156 -14.79568 -14.52555 -14.41694 -14.30851 -14.12084 -14.08107 -13.90111 -13.68967 -13.37618 -13.34441 -13.09696 -13.04460 -12.81314 -12.62203 -12.45838 -12.41939 -12.10238 -11.92003 -11.75271 -11.73272 -11.67791 -11.39198 -10.95994 -10.60860 -10.18008 -10.04183 -9.95404 -9.69959 -9.15357 -4.94059 -0.42330 0.01883 0.38990 0.50905 1.25518 1.61008 1.62149 1.93733 1.95857 2.19713 2.53233 2.85395 3.04382 3.25154 3.29771 3.35338 3.43498 3.50140 3.61641 3.63484 3.67588 3.85856 3.90174 3.91203 4.11082 4.13596 4.15239 4.19995 4.25444 4.26672 4.45521 4.45843 4.47635 4.49449 4.50646 4.56576 4.58001 4.61821 4.67609 4.73286 4.83921 4.93225 4.95397 5.01833 5.05454 5.05587 5.12903 5.22895 5.34680 5.40703 5.46869 5.50021 5.61046 5.82347 6.32113 6.36586 6.45435 6.53104 7.11470 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.118 4.118 3 C 0.162 3.838 4 O -0.488 6.488 5 C -0.148 4.148 6 C -0.067 4.067 7 O -0.528 6.528 8 Si 0.684 3.316 9 C -0.053 4.053 10 C -0.139 4.139 11 C 0.562 3.438 12 O -0.531 6.531 13 N -0.717 5.717 14 C 0.124 3.876 15 H 0.121 0.879 16 C -0.136 4.136 17 C -0.107 4.107 18 H 0.108 0.892 19 C 0.072 3.928 20 O -0.312 6.312 21 C 0.129 3.871 22 C -0.211 4.211 23 C -0.081 4.081 24 C -0.159 4.159 25 C -0.080 4.080 26 C -0.153 4.153 27 C -0.145 4.145 28 C -0.066 4.066 29 H 0.072 0.928 30 H 0.071 0.929 31 H 0.078 0.922 32 H 0.399 0.601 33 H 0.124 0.876 34 H 0.375 0.625 35 H -0.255 1.255 36 H -0.252 1.252 37 H 0.145 0.855 38 H 0.400 0.600 39 H 0.085 0.915 40 H 0.090 0.910 41 H 0.065 0.935 42 H 0.063 0.937 43 H 0.126 0.874 44 H 0.125 0.875 45 H 0.124 0.876 46 H 0.130 0.870 47 H 0.131 0.869 48 H 0.086 0.914 49 H 0.079 0.921 50 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.344 -2.463 0.778 5.935 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.118 4.118 3 C 0.116 3.884 4 O -0.299 6.299 5 C -0.149 4.149 6 C -0.176 4.176 7 O -0.335 6.335 8 Si 0.585 3.415 9 C -0.072 4.072 10 C -0.142 4.142 11 C 0.350 3.650 12 O -0.408 6.408 13 N -0.368 5.368 14 C 0.019 3.981 15 H 0.139 0.861 16 C -0.174 4.174 17 C -0.126 4.126 18 H 0.127 0.873 19 C -0.003 4.003 20 O -0.226 6.226 21 C 0.084 3.916 22 C -0.230 4.230 23 C -0.099 4.099 24 C -0.178 4.178 25 C -0.098 4.098 26 C -0.172 4.172 27 C -0.184 4.184 28 C -0.084 4.084 29 H 0.091 0.909 30 H 0.089 0.911 31 H 0.097 0.903 32 H 0.257 0.743 33 H 0.142 0.858 34 H 0.223 0.777 35 H -0.179 1.179 36 H -0.177 1.177 37 H 0.163 0.837 38 H 0.236 0.764 39 H 0.103 0.897 40 H 0.108 0.892 41 H 0.084 0.916 42 H 0.082 0.918 43 H 0.144 0.856 44 H 0.143 0.857 45 H 0.142 0.858 46 H 0.148 0.852 47 H 0.148 0.852 48 H 0.105 0.895 49 H 0.097 0.903 50 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -3.676 -1.910 1.463 4.394 hybrid contribution -1.131 -0.088 -1.588 1.952 sum -4.807 -1.998 -0.125 5.208 Atomic orbital electron populations 1.20738 0.89715 1.03864 1.02798 1.20212 0.97307 0.92088 1.02233 1.18304 0.88783 0.85292 0.95997 1.84662 1.75626 1.35688 1.33972 1.20572 0.93828 0.95852 1.04614 1.24903 1.10543 0.93839 0.88366 1.86612 1.82786 1.47682 1.16385 0.94682 0.74297 0.81249 0.91283 1.21168 1.00903 0.90236 0.94881 1.19812 0.93451 0.93422 1.07563 1.18186 0.87273 0.83647 0.75909 1.90817 1.13311 1.87495 1.49169 1.45879 1.10116 1.05348 1.75449 1.22519 0.97581 0.80816 0.97149 0.86145 1.23354 1.00472 0.94549 0.99016 1.22390 1.00043 0.93545 0.96614 0.87343 1.22799 0.94916 0.91911 0.90710 1.86085 1.37531 1.45642 1.53358 1.19033 0.90133 0.89678 0.92756 1.21259 0.93402 1.03443 1.04871 1.20988 0.99729 0.94178 0.94975 1.21122 0.95214 1.01150 1.00274 1.21032 0.93945 0.96712 0.98125 1.20498 1.00945 0.97356 0.98383 1.23595 1.03587 0.94254 0.96976 1.21093 0.92580 0.97788 0.96969 0.90901 0.91051 0.90326 0.74299 0.85809 0.77750 1.17945 1.17715 0.83726 0.76398 0.89680 0.89185 0.91649 0.91836 0.85604 0.85744 0.85786 0.85235 0.85154 0.89527 0.90252 0.85095 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.29 9.78 36.01 0.35 0.64 16 2 C -0.12 0.10 5.89 -104.54 -0.62 -0.51 16 3 C 0.16 0.03 6.66 -39.02 -0.26 -0.23 16 4 O -0.49 0.11 11.84 -18.85 -0.22 -0.11 16 5 C -0.15 -0.07 5.26 -104.54 -0.55 -0.62 16 6 C -0.07 -0.02 2.37 36.01 0.09 0.07 16 7 O -0.53 -0.41 12.88 -35.23 -0.45 -0.87 16 8 Si 0.68 0.17 30.26 -169.99 -5.14 -4.97 16 9 C -0.05 -0.06 8.20 -39.22 -0.32 -0.38 16 10 C -0.14 -0.09 5.87 -104.96 -0.62 -0.70 16 11 C 0.56 1.01 7.76 -12.44 -0.10 0.91 16 12 O -0.53 -2.95 15.96 5.29 0.08 -2.87 16 13 N -0.72 0.94 5.31 -54.03 -0.29 0.66 16 14 C 0.12 -0.16 4.21 -67.12 -0.28 -0.45 16 15 H 0.12 0.04 7.50 -51.93 -0.39 -0.35 16 16 C -0.14 0.46 7.39 -25.92 -0.19 0.27 16 17 C -0.11 0.22 4.01 -89.71 -0.36 -0.14 16 18 H 0.11 -0.16 8.14 -51.93 -0.42 -0.59 16 19 C 0.07 -0.09 4.58 37.15 0.17 0.08 16 20 O -0.31 -0.56 10.14 -19.44 -0.20 -0.76 16 21 C 0.13 0.27 6.69 -39.22 -0.26 0.00 16 22 C -0.21 -0.18 9.04 -39.43 -0.36 -0.54 16 23 C -0.08 -0.04 10.04 -39.61 -0.40 -0.44 16 24 C -0.16 -0.09 10.04 -39.56 -0.40 -0.49 16 25 C -0.08 -0.06 10.04 -39.60 -0.40 -0.46 16 26 C -0.15 -0.27 9.99 -39.43 -0.39 -0.67 16 27 C -0.15 0.18 7.45 -25.83 -0.19 -0.01 16 28 C -0.07 0.09 9.18 -39.22 -0.36 -0.27 16 29 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 30 H 0.07 -0.25 8.08 -51.93 -0.42 -0.67 16 31 H 0.08 -0.14 7.52 -51.93 -0.39 -0.53 16 32 H 0.40 -1.38 9.06 45.56 0.41 -0.96 16 33 H 0.12 0.03 7.82 -51.93 -0.41 -0.37 16 34 H 0.38 -0.71 8.70 45.56 0.40 -0.31 16 35 H -0.25 -0.63 6.68 56.52 0.38 -0.25 16 36 H -0.25 -0.77 7.11 56.52 0.40 -0.37 16 37 H 0.15 0.25 4.44 -52.49 -0.23 0.01 16 38 H 0.40 -1.62 6.73 -40.82 -0.27 -1.90 16 39 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 40 H 0.09 -0.43 8.07 -51.93 -0.42 -0.85 16 41 H 0.07 -0.14 7.65 -51.93 -0.40 -0.54 16 42 H 0.06 -0.14 7.39 -51.93 -0.38 -0.52 16 43 H 0.13 -0.14 6.30 -52.49 -0.33 -0.47 16 44 H 0.12 -0.19 8.06 -52.48 -0.42 -0.61 16 45 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 46 H 0.13 -0.16 8.06 -52.49 -0.42 -0.59 16 47 H 0.13 0.11 8.06 -52.49 -0.42 -0.31 16 48 H 0.09 -0.14 7.91 -51.93 -0.41 -0.55 16 49 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 50 H 0.13 -0.57 6.39 -52.49 -0.34 -0.91 16 LS Contribution 412.99 15.07 6.22 6.22 Total: 0.00 -9.01 412.99 -11.62 -20.64 By element: Atomic # 1 Polarization: -7.83 SS G_CDS: -6.19 Total: -14.01 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: -5.44 Total: -3.93 kcal Atomic # 7 Polarization: 0.94 SS G_CDS: -0.29 Total: 0.66 kcal Atomic # 8 Polarization: -3.82 SS G_CDS: -0.79 Total: -4.61 kcal Atomic # 14 Polarization: 0.17 SS G_CDS: -5.14 Total: -4.97 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -9.01 -11.62 -20.64 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16536076_13287732.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.702 kcal (2) G-P(sol) polarization free energy of solvation -9.014 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.716 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.625 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.639 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.341 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds