Wall clock time and date at job start Tue Mar 9 2021 13:17:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86298 * 109.47250 * 2 1 4 4 C 1.50699 * 109.46963 * 120.00063 * 2 1 3 5 5 C 1.34177 * 125.44053 * 65.00361 * 4 2 1 6 6 C 1.47023 * 105.95631 * 179.97438 * 5 4 2 7 7 C 1.47374 * 127.19075 * 179.97438 * 6 5 4 8 8 O 1.21612 * 120.00495 * 0.02562 * 7 6 5 9 9 N 1.34777 * 119.99849 * 180.02562 * 7 6 5 10 10 C 1.46497 * 120.00070 * 180.02562 * 9 7 6 11 11 H 1.09001 * 112.90805 * 23.74892 * 10 9 7 12 12 C 1.53790 * 113.61458 * 154.99740 * 10 9 7 13 13 C 1.53782 * 87.07895 * 139.97921 * 12 10 9 14 14 H 1.09002 * 113.61366 * 89.20341 * 13 12 10 15 15 C 1.52998 * 113.61341 * 220.01626 * 13 12 10 16 16 O 1.42901 * 109.47046 * 185.00234 * 15 13 12 17 17 C 1.35905 * 116.99604 * 180.02562 * 16 15 13 18 18 C 1.38723 * 120.05884 * 359.72201 * 17 16 15 19 19 C 1.38145 * 119.94323 * 179.77076 * 18 17 16 20 20 C 1.38260 * 120.05692 * 0.50972 * 19 18 17 21 21 C 1.38268 * 120.10972 * 359.74026 * 20 19 18 22 22 C 1.38139 * 120.05510 * 0.02562 * 21 20 19 23 23 C 1.53775 * 87.08442 * 334.56796 * 13 12 10 24 24 C 1.36414 * 105.61436 * 0.22643 * 6 5 4 25 25 O 1.33661 * 108.39727 * 359.62794 * 24 6 5 26 26 H 0.96696 * 114.00417 * 299.99813 * 1 2 3 27 27 H 1.09000 * 109.47326 * 239.99819 * 2 1 3 28 28 H 1.48499 * 109.99996 * 300.00159 * 3 2 1 29 29 H 1.48496 * 109.99663 * 61.31560 * 3 2 1 30 30 H 1.08004 * 127.02141 * 0.02562 * 5 4 2 31 31 H 0.97008 * 120.00299 * 359.97438 * 9 7 6 32 32 H 1.08998 * 113.61173 * 25.43268 * 12 10 9 33 33 H 1.08998 * 113.69003 * 254.53718 * 12 10 9 34 34 H 1.08999 * 109.47084 * 65.00277 * 15 13 12 35 35 H 1.08998 * 109.47592 * 305.00378 * 15 13 12 36 36 H 1.08001 * 120.02769 * 0.02562 * 18 17 16 37 37 H 1.08006 * 119.97076 * 180.25587 * 19 18 17 38 38 H 1.08001 * 119.94806 * 179.77234 * 20 19 18 39 39 H 1.08008 * 119.96969 * 180.02562 * 21 20 19 40 40 H 1.08001 * 120.02451 * 179.97438 * 22 21 20 41 41 H 1.08996 * 113.61937 * 139.97790 * 23 13 12 42 42 H 1.08998 * 113.61683 * 270.88481 * 23 13 12 43 43 H 1.08002 * 125.80084 * 179.75538 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.7551 -2.0122 1.5037 6 6 2.4130 -2.2463 2.7975 7 6 2.5006 -3.5193 3.5349 8 8 1.9931 -4.5244 3.0755 9 7 3.1432 -3.5695 4.7185 10 6 3.2308 -4.8350 5.4514 11 1 3.1275 -5.7071 4.8058 12 6 4.4356 -4.9131 6.4040 13 6 3.4987 -5.6094 7.4052 14 1 3.4697 -6.6934 7.2948 15 6 3.7108 -5.1653 8.8539 16 8 2.8823 -5.9462 9.7176 17 6 2.9505 -5.6762 11.0478 18 6 3.8015 -4.6842 11.5127 19 6 3.8654 -4.4086 12.8649 20 6 3.0899 -5.1274 13.7556 21 6 2.2447 -6.1201 13.2952 22 6 2.1736 -6.3964 11.9436 23 6 2.3382 -4.8854 6.7026 24 6 2.9204 -1.0377 3.1754 25 8 2.6269 -0.1420 2.2277 26 1 -0.3934 0.4416 0.7650 27 1 1.7924 -0.5139 -0.8900 28 1 1.5615 2.4679 -1.2085 29 1 1.5878 2.4585 1.2242 30 1 1.2367 -2.7397 0.8967 31 1 3.5484 -2.7678 5.0849 32 1 4.7890 -3.9388 6.7417 33 1 5.2401 -5.5528 6.0413 34 1 3.4483 -4.1121 8.9532 35 1 4.7563 -5.3066 9.1279 36 1 4.4106 -4.1252 10.8178 37 1 4.5248 -3.6335 13.2269 38 1 3.1440 -4.9129 14.8127 39 1 1.6396 -6.6800 13.9930 40 1 1.5136 -7.1721 11.5846 41 1 1.4486 -5.5032 6.5796 42 1 2.1182 -3.9036 7.1218 43 1 3.4681 -0.8389 4.0847 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16536076_13456056.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:17:21 Heat of formation + Delta-G solvation = -30.574143 kcal Electronic energy + Delta-G solvation = -26299.419749 eV Core-core repulsion = 22279.396337 eV Total energy + Delta-G solvation = -4020.023412 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.135 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -43.75769 -41.43935 -40.77099 -39.36985 -38.17949 -38.07322 -34.83822 -33.83075 -32.06459 -31.83787 -31.00643 -29.15726 -26.90324 -26.80281 -25.54644 -23.93648 -23.26923 -22.42460 -22.28849 -21.32736 -20.53481 -19.42195 -19.13296 -17.99574 -17.67216 -17.53862 -17.33000 -16.98948 -16.91986 -16.50734 -16.24875 -16.12149 -15.90882 -15.54458 -15.34235 -14.88684 -14.39951 -14.28667 -14.18106 -14.07897 -13.95823 -13.69043 -13.65362 -13.32296 -13.06055 -12.98191 -12.60655 -12.43847 -12.11231 -12.10620 -11.91510 -11.74099 -11.38756 -11.06315 -10.92378 -10.78194 -10.14055 -9.95176 -9.85635 -9.15134 -5.03669 0.18682 0.39245 0.51152 0.85830 1.08648 1.43881 1.67667 1.88503 1.95430 2.20180 2.30712 2.85653 3.10149 3.25170 3.34040 3.36126 3.53425 3.63573 3.65658 3.85579 3.86977 3.91582 4.11320 4.14691 4.20187 4.25341 4.27001 4.35135 4.45842 4.47678 4.51200 4.54896 4.58203 4.66099 4.72579 4.76463 4.84349 4.94069 5.05686 5.12698 5.18705 5.34953 5.43683 5.47099 5.61295 5.78513 5.82603 6.19698 6.38994 6.45712 7.16651 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.036 4.036 3 Si 0.705 3.295 4 C -0.056 4.056 5 C -0.122 4.122 6 C -0.238 4.238 7 C 0.589 3.411 8 O -0.529 6.529 9 N -0.718 5.718 10 C 0.125 3.875 11 H 0.121 0.879 12 C -0.136 4.136 13 C -0.107 4.107 14 H 0.109 0.891 15 C 0.072 3.928 16 O -0.313 6.313 17 C 0.129 3.871 18 C -0.211 4.211 19 C -0.081 4.081 20 C -0.159 4.159 21 C -0.080 4.080 22 C -0.153 4.153 23 C -0.146 4.146 24 C 0.032 3.968 25 O -0.166 6.166 26 H 0.381 0.619 27 H 0.138 0.862 28 H -0.249 1.249 29 H -0.256 1.256 30 H 0.162 0.838 31 H 0.398 0.602 32 H 0.090 0.910 33 H 0.084 0.916 34 H 0.063 0.937 35 H 0.065 0.935 36 H 0.126 0.874 37 H 0.125 0.875 38 H 0.124 0.876 39 H 0.130 0.870 40 H 0.131 0.869 41 H 0.079 0.921 42 H 0.086 0.914 43 H 0.213 0.787 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.067 3.947 2.650 6.948 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.327 6.327 2 C -0.145 4.145 3 Si 0.603 3.397 4 C -0.105 4.105 5 C -0.142 4.142 6 C -0.242 4.242 7 C 0.377 3.623 8 O -0.406 6.406 9 N -0.369 5.369 10 C 0.021 3.979 11 H 0.139 0.861 12 C -0.174 4.174 13 C -0.126 4.126 14 H 0.127 0.873 15 C -0.003 4.003 16 O -0.226 6.226 17 C 0.084 3.916 18 C -0.230 4.230 19 C -0.099 4.099 20 C -0.178 4.178 21 C -0.098 4.098 22 C -0.172 4.172 23 C -0.184 4.184 24 C -0.039 4.039 25 O -0.062 6.062 26 H 0.229 0.771 27 H 0.156 0.844 28 H -0.173 1.173 29 H -0.180 1.180 30 H 0.180 0.820 31 H 0.233 0.767 32 H 0.108 0.892 33 H 0.103 0.897 34 H 0.082 0.918 35 H 0.083 0.917 36 H 0.144 0.856 37 H 0.143 0.857 38 H 0.142 0.858 39 H 0.148 0.852 40 H 0.149 0.851 41 H 0.097 0.903 42 H 0.105 0.895 43 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges 4.515 3.905 1.615 6.184 hybrid contribution -0.657 0.114 1.001 1.203 sum 3.858 4.019 2.616 6.154 Atomic orbital electron populations 1.86682 1.16633 1.80128 1.49216 1.24405 0.84039 1.12298 0.93747 0.94460 0.91253 0.72996 0.80947 1.22681 1.01694 0.93387 0.92704 1.22557 1.00968 0.95333 0.95343 1.21538 1.09192 0.94308 0.99199 1.17303 0.77780 0.87114 0.80136 1.90824 1.46198 1.35683 1.67897 1.45799 1.57559 1.12218 1.21361 1.22504 0.96136 0.87803 0.91502 0.86128 1.23366 0.97121 1.01688 0.95223 1.22362 0.97549 1.01691 0.91018 0.87330 1.22802 0.94229 0.94670 0.88629 1.86086 1.63042 1.59245 1.14250 1.19031 0.95100 0.94392 0.83075 1.21258 1.03172 1.01343 0.97209 1.20989 0.97888 0.98495 0.92503 1.21122 0.98701 0.97933 1.00007 1.21032 0.97517 0.96742 0.94519 1.20499 1.02151 1.02303 0.92228 1.23569 0.98115 1.01269 0.95479 1.24456 0.99549 0.86720 0.93163 1.83696 1.57221 1.38974 1.26297 0.77107 0.84429 1.17320 1.18026 0.82005 0.76730 0.89188 0.89716 0.91835 0.91660 0.85605 0.85741 0.85785 0.85230 0.85149 0.90261 0.89514 0.77026 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.27 12.88 -35.23 -0.45 -0.73 16 2 C -0.04 0.03 2.97 36.01 0.11 0.14 16 3 Si 0.70 -1.17 32.09 -169.99 -5.46 -6.62 16 4 C -0.06 -0.01 6.18 -35.74 -0.22 -0.23 16 5 C -0.12 -0.21 10.90 -37.45 -0.41 -0.62 16 6 C -0.24 -0.21 6.31 -103.28 -0.65 -0.86 16 7 C 0.59 1.35 7.81 -12.54 -0.10 1.25 16 8 O -0.53 -3.55 16.58 5.27 0.09 -3.47 16 9 N -0.72 1.00 5.35 -54.10 -0.29 0.71 16 10 C 0.13 -0.15 4.24 -67.11 -0.28 -0.43 16 11 H 0.12 0.09 7.47 -51.93 -0.39 -0.30 16 12 C -0.14 0.46 7.39 -25.91 -0.19 0.27 16 13 C -0.11 0.21 4.01 -89.81 -0.36 -0.15 16 14 H 0.11 -0.15 8.14 -51.93 -0.42 -0.57 16 15 C 0.07 -0.09 4.58 37.16 0.17 0.08 16 16 O -0.31 -0.58 10.14 -19.44 -0.20 -0.78 16 17 C 0.13 0.27 6.69 -39.22 -0.26 0.01 16 18 C -0.21 -0.19 9.04 -39.44 -0.36 -0.54 16 19 C -0.08 -0.04 10.04 -39.61 -0.40 -0.44 16 20 C -0.16 -0.10 10.04 -39.56 -0.40 -0.49 16 21 C -0.08 -0.07 10.04 -39.61 -0.40 -0.46 16 22 C -0.15 -0.28 9.99 -39.44 -0.39 -0.67 16 23 C -0.15 0.17 7.43 -25.92 -0.19 -0.03 16 24 C 0.03 -0.07 11.61 30.07 0.35 0.28 16 25 O -0.17 0.12 8.90 7.63 0.07 0.19 16 26 H 0.38 -0.89 8.70 45.56 0.40 -0.49 16 27 H 0.14 -0.31 7.96 -51.93 -0.41 -0.72 16 28 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 29 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 30 H 0.16 0.37 8.06 -52.48 -0.42 -0.05 16 31 H 0.40 -1.89 7.70 -40.82 -0.31 -2.20 16 32 H 0.09 -0.45 8.08 -51.93 -0.42 -0.87 16 33 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 34 H 0.06 -0.14 7.37 -51.93 -0.38 -0.52 16 35 H 0.07 -0.14 7.65 -51.93 -0.40 -0.54 16 36 H 0.13 -0.14 6.30 -52.49 -0.33 -0.47 16 37 H 0.12 -0.18 8.06 -52.48 -0.42 -0.61 16 38 H 0.12 -0.14 8.06 -52.49 -0.42 -0.57 16 39 H 0.13 -0.16 8.06 -52.48 -0.42 -0.58 16 40 H 0.13 0.12 8.06 -52.49 -0.42 -0.31 16 41 H 0.08 0.03 8.14 -51.93 -0.42 -0.40 16 42 H 0.09 -0.14 7.90 -51.93 -0.41 -0.55 16 43 H 0.21 -1.45 7.47 -52.49 -0.39 -1.84 16 LS Contribution 370.74 15.07 5.59 5.59 Total: 0.00 -9.75 370.74 -10.27 -20.02 By element: Atomic # 1 Polarization: -6.37 SS G_CDS: -5.63 Total: -12.00 kcal Atomic # 6 Polarization: 1.08 SS G_CDS: -3.99 Total: -2.91 kcal Atomic # 7 Polarization: 1.00 SS G_CDS: -0.29 Total: 0.71 kcal Atomic # 8 Polarization: -4.29 SS G_CDS: -0.50 Total: -4.79 kcal Atomic # 14 Polarization: -1.17 SS G_CDS: -5.46 Total: -6.62 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -9.75 -10.27 -20.02 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16536076_13456056.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.553 kcal (2) G-P(sol) polarization free energy of solvation -9.750 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.303 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.272 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.021 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.574 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds