Wall clock time and date at job start Tue Mar 9 2021 13:17:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50699 * 109.47249 * 239.99737 * 2 1 3 5 5 C 1.34857 * 125.89101 * 119.69150 * 4 2 1 6 6 C 1.40887 * 107.41731 * 179.88675 * 5 4 2 7 7 C 1.34850 * 107.41628 * 0.37780 * 6 5 4 8 8 C 1.50707 * 125.88685 * 179.80422 * 7 6 5 9 9 C 1.50700 * 109.47104 * 274.95868 * 8 7 6 10 10 O 1.21287 * 120.00080 * 0.02562 * 9 8 7 11 11 N 1.34771 * 120.00406 * 180.02562 * 9 8 7 12 12 C 1.46501 * 120.00658 * 180.02562 * 11 9 8 13 13 H 1.08999 * 112.84539 * 336.19812 * 12 11 9 14 14 C 1.53782 * 113.61397 * 107.49870 * 12 11 9 15 15 C 1.53784 * 87.07985 * 139.98237 * 14 12 11 16 16 H 1.09002 * 113.61236 * 89.11439 * 15 14 12 17 17 C 1.52998 * 113.61802 * 220.02053 * 15 14 12 18 18 O 1.42900 * 109.46713 * 272.49774 * 17 15 14 19 19 C 1.35899 * 116.99524 * 179.97438 * 18 17 15 20 20 C 1.38733 * 120.06117 * 359.72762 * 19 18 17 21 21 C 1.38143 * 119.94771 * 179.74427 * 20 19 18 22 22 C 1.38269 * 120.05381 * 0.50855 * 21 20 19 23 23 C 1.38261 * 120.11290 * 359.76449 * 22 21 20 24 24 C 1.38150 * 120.05673 * 359.97438 * 23 22 21 25 25 C 1.53774 * 113.61676 * 204.99862 * 12 11 9 26 26 N 1.36331 * 108.22111 * 359.77190 * 7 6 5 27 27 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 28 28 H 1.09004 * 109.47449 * 120.00278 * 2 1 3 29 29 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 30 30 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 31 31 H 1.08005 * 126.28798 * 0.02625 * 5 4 2 32 32 H 1.08000 * 126.29230 * 180.12974 * 6 5 4 33 33 H 1.08997 * 109.47399 * 34.96173 * 8 7 6 34 34 H 1.08994 * 109.46929 * 154.96199 * 8 7 6 35 35 H 0.97010 * 119.99534 * 0.02562 * 11 9 8 36 36 H 1.08992 * 113.61644 * 254.53177 * 14 12 11 37 37 H 1.08998 * 113.61002 * 25.43987 * 14 12 11 38 38 H 1.08997 * 109.46720 * 32.49413 * 17 15 14 39 39 H 1.08996 * 109.47087 * 152.50186 * 17 15 14 40 40 H 1.07998 * 120.02377 * 359.97438 * 20 19 18 41 41 H 1.08001 * 119.97351 * 180.23245 * 21 20 19 42 42 H 1.07996 * 119.94299 * 179.75122 * 22 21 20 43 43 H 1.07997 * 119.97411 * 179.97438 * 23 22 21 44 44 H 1.07997 * 120.03030 * 179.97438 * 24 23 22 45 45 H 1.09006 * 113.61607 * 334.56691 * 25 12 11 46 46 H 1.09009 * 113.61609 * 105.46544 * 25 12 11 47 47 H 0.96996 * 125.64050 * 180.02562 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7050 -0.1711 -2.1943 6 6 2.9442 -1.1745 -3.1539 7 6 2.3006 -2.2864 -2.7442 8 6 2.2755 -3.6092 -3.4658 9 6 1.1823 -3.5950 -4.5030 10 8 0.4918 -2.6078 -4.6428 11 7 0.9718 -4.6793 -5.2752 12 6 -0.0905 -4.6653 -6.2839 13 1 -0.8784 -3.9466 -6.0587 14 6 0.4318 -4.5774 -7.7276 15 6 -0.6676 -5.5849 -8.1033 16 1 -1.6134 -5.1172 -8.3769 17 6 -0.2120 -6.6417 -9.1116 18 8 -0.4032 -6.1473 -10.4387 19 6 -0.0455 -6.9689 -11.4604 20 6 0.4839 -8.2227 -11.1913 21 6 0.8417 -9.0580 -12.2318 22 6 0.6825 -8.6412 -13.5406 23 6 0.1604 -7.3899 -13.8114 24 6 -0.2040 -6.5529 -12.7745 25 6 -0.6174 -6.0646 -6.6431 26 7 1.6771 -2.0077 -1.5642 27 1 -0.3934 0.4417 -0.7651 28 1 1.7923 -0.5139 0.8900 29 1 1.5879 2.4585 -1.2243 30 1 1.5615 2.4679 1.2085 31 1 3.0754 0.8431 -2.2238 32 1 3.5314 -1.0709 -4.0543 33 1 3.2363 -3.7757 -3.9529 34 1 2.0873 -4.4098 -2.7505 35 1 1.5239 -5.4691 -5.1632 36 1 0.2979 -3.5956 -8.1814 37 1 1.4421 -4.9676 -7.8508 38 1 0.8438 -6.8623 -8.9546 39 1 -0.7976 -7.5507 -8.9747 40 1 0.6126 -8.5469 -10.1693 41 1 1.2504 -10.0356 -12.0228 42 1 0.9666 -9.2941 -14.3526 43 1 0.0374 -7.0665 -14.8345 44 1 -0.6114 -5.5755 -12.9866 45 1 0.1061 -6.8614 -6.4699 46 1 -1.5985 -6.2834 -6.2213 47 1 1.1414 -2.6296 -1.0474 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16536076_14644196.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:17:41 Heat of formation + Delta-G solvation = -8.587946 kcal Electronic energy + Delta-G solvation = -27995.605449 eV Core-core repulsion = 23918.716474 eV Total energy + Delta-G solvation = -4076.888975 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.29424 -41.42179 -40.77685 -39.44177 -38.08967 -37.74292 -34.68837 -33.07814 -32.00748 -31.84897 -31.05794 -29.68727 -28.79595 -26.89602 -25.43833 -24.28048 -23.37291 -22.68054 -21.73203 -21.29197 -21.14842 -20.64771 -19.20503 -18.94108 -18.12091 -17.77688 -17.12033 -16.95046 -16.80508 -16.45067 -16.40561 -16.26637 -16.01286 -15.36243 -15.23614 -15.05818 -14.53179 -14.45705 -14.32600 -14.22550 -14.10501 -13.96707 -13.75423 -13.68329 -13.63260 -13.23032 -13.05539 -12.83472 -12.58721 -12.42637 -12.11444 -12.08552 -11.90654 -11.73585 -11.73289 -11.38436 -10.86918 -10.75267 -10.09466 -9.94940 -9.70614 -9.14919 -8.89614 -4.86895 0.39438 0.51335 1.12995 1.34192 1.59651 1.72364 1.88755 1.99791 2.11786 2.32987 2.51596 2.85834 3.27209 3.35915 3.39654 3.60471 3.63927 3.66075 3.85077 3.86007 3.89725 3.93316 4.00738 4.11607 4.17723 4.20852 4.26489 4.34296 4.46040 4.47392 4.48243 4.51158 4.57919 4.60741 4.66179 4.73658 4.83460 4.85012 4.94161 5.05939 5.14243 5.33053 5.35200 5.36802 5.45389 5.47323 5.61480 5.82808 6.05308 6.20623 6.40035 6.41899 6.45886 6.67054 7.19397 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.055 4.055 3 Si 0.714 3.286 4 C -0.009 4.009 5 C -0.186 4.186 6 C -0.173 4.173 7 C 0.036 3.964 8 C -0.072 4.072 9 C 0.512 3.488 10 O -0.522 6.522 11 N -0.724 5.724 12 C 0.124 3.876 13 H 0.117 0.883 14 C -0.145 4.145 15 C -0.108 4.108 16 H 0.107 0.893 17 C 0.072 3.928 18 O -0.313 6.313 19 C 0.129 3.871 20 C -0.211 4.211 21 C -0.081 4.081 22 C -0.159 4.159 23 C -0.080 4.080 24 C -0.153 4.153 25 C -0.136 4.136 26 N -0.535 5.535 27 H 0.380 0.620 28 H 0.114 0.886 29 H -0.257 1.257 30 H -0.258 1.258 31 H 0.142 0.858 32 H 0.136 0.864 33 H 0.118 0.882 34 H 0.100 0.900 35 H 0.401 0.599 36 H 0.078 0.922 37 H 0.087 0.913 38 H 0.064 0.936 39 H 0.065 0.935 40 H 0.126 0.874 41 H 0.125 0.875 42 H 0.124 0.876 43 H 0.130 0.870 44 H 0.131 0.869 45 H 0.090 0.910 46 H 0.082 0.918 47 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.896 -5.328 0.239 6.604 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.164 4.164 3 Si 0.613 3.387 4 C -0.123 4.123 5 C -0.211 4.211 6 C -0.197 4.197 7 C -0.078 4.078 8 C -0.113 4.113 9 C 0.298 3.702 10 O -0.397 6.397 11 N -0.375 5.375 12 C 0.019 3.981 13 H 0.135 0.865 14 C -0.183 4.183 15 C -0.127 4.127 16 H 0.126 0.874 17 C -0.003 4.003 18 O -0.226 6.226 19 C 0.084 3.916 20 C -0.230 4.230 21 C -0.099 4.099 22 C -0.178 4.178 23 C -0.098 4.098 24 C -0.172 4.172 25 C -0.175 4.175 26 N -0.130 5.130 27 H 0.228 0.772 28 H 0.132 0.868 29 H -0.181 1.181 30 H -0.183 1.183 31 H 0.159 0.841 32 H 0.154 0.846 33 H 0.136 0.864 34 H 0.118 0.882 35 H 0.236 0.764 36 H 0.096 0.904 37 H 0.105 0.895 38 H 0.082 0.918 39 H 0.083 0.917 40 H 0.144 0.856 41 H 0.143 0.857 42 H 0.142 0.858 43 H 0.148 0.852 44 H 0.148 0.852 45 H 0.108 0.892 46 H 0.101 0.899 47 H 0.249 0.751 Dipole moment (debyes) X Y Z Total from point charges 3.087 -3.960 0.803 5.085 hybrid contribution -0.968 -1.314 -0.279 1.655 sum 2.120 -5.274 0.523 5.708 Atomic orbital electron populations 1.86558 1.17963 1.80237 1.49652 1.24780 0.83752 1.11438 0.96473 0.94443 0.91416 0.72575 0.80216 1.20789 1.05948 0.85397 1.00129 1.20656 1.04616 0.99967 0.95840 1.20589 1.05766 0.92271 1.01091 1.19477 1.02328 0.96475 0.89528 1.20144 0.99745 0.94764 0.96656 1.20660 0.84946 0.82920 0.81719 1.90771 1.47656 1.32531 1.68731 1.45981 1.36530 1.17198 1.37824 1.22458 0.90845 0.98011 0.86768 0.86472 1.23555 0.98650 1.00450 0.95689 1.22365 1.00866 0.96647 0.92784 0.87445 1.22799 1.00647 0.97132 0.79726 1.86084 1.80272 1.42342 1.13942 1.19034 0.94835 0.89504 0.88224 1.21259 1.06602 0.94836 1.00278 1.20991 0.97401 0.99058 0.92423 1.21121 1.02783 0.97054 0.96796 1.21030 0.96439 0.93542 0.98791 1.20503 1.05496 1.01623 0.89570 1.23362 1.02707 0.96956 0.94425 1.41780 1.40986 1.11027 1.19227 0.77221 0.86767 1.18149 1.18307 0.84082 0.84580 0.86421 0.88214 0.76426 0.90363 0.89472 0.91795 0.91710 0.85616 0.85737 0.85778 0.85227 0.85153 0.89168 0.89932 0.75125 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.21 12.88 -35.23 -0.45 -1.66 16 2 C -0.06 -0.04 3.08 36.01 0.11 0.08 16 3 Si 0.71 -0.16 30.58 -169.99 -5.20 -5.36 16 4 C -0.01 -0.02 6.51 -81.79 -0.53 -0.55 16 5 C -0.19 -0.39 9.37 -39.78 -0.37 -0.76 16 6 C -0.17 -0.40 10.76 -39.78 -0.43 -0.83 16 7 C 0.04 0.05 5.66 -81.79 -0.46 -0.42 16 8 C -0.07 0.14 6.24 -29.03 -0.18 -0.04 16 9 C 0.51 0.35 7.82 -10.99 -0.09 0.26 16 10 O -0.52 -2.94 15.63 5.55 0.09 -2.85 16 11 N -0.72 1.50 5.35 -53.02 -0.28 1.22 16 12 C 0.12 -0.15 4.24 -67.12 -0.28 -0.44 16 13 H 0.12 0.11 7.46 -51.93 -0.39 -0.28 16 14 C -0.14 0.16 7.43 -25.92 -0.19 -0.03 16 15 C -0.11 0.19 4.01 -89.81 -0.36 -0.17 16 16 H 0.11 -0.12 8.14 -51.93 -0.42 -0.54 16 17 C 0.07 -0.08 4.58 37.16 0.17 0.09 16 18 O -0.31 -0.63 10.14 -19.42 -0.20 -0.82 16 19 C 0.13 0.28 6.69 -39.21 -0.26 0.02 16 20 C -0.21 -0.21 9.04 -39.43 -0.36 -0.56 16 21 C -0.08 -0.05 10.04 -39.60 -0.40 -0.45 16 22 C -0.16 -0.10 10.04 -39.56 -0.40 -0.50 16 23 C -0.08 -0.07 10.04 -39.61 -0.40 -0.47 16 24 C -0.15 -0.29 9.99 -39.43 -0.39 -0.68 16 25 C -0.14 0.44 7.39 -25.92 -0.19 0.24 16 26 N -0.54 -0.65 6.07 -5.44 -0.03 -0.68 16 27 H 0.38 0.09 8.70 45.56 0.40 0.49 16 28 H 0.11 -0.06 7.96 -51.93 -0.41 -0.47 16 29 H -0.26 -0.59 7.11 56.52 0.40 -0.19 16 30 H -0.26 -0.68 7.11 56.52 0.40 -0.28 16 31 H 0.14 0.06 6.22 -52.48 -0.33 -0.27 16 32 H 0.14 0.17 8.06 -52.49 -0.42 -0.26 16 33 H 0.12 -0.48 8.14 -51.93 -0.42 -0.90 16 34 H 0.10 -0.42 8.14 -51.93 -0.42 -0.85 16 35 H 0.40 -2.05 8.73 -40.82 -0.36 -2.40 16 36 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 37 H 0.09 -0.15 7.90 -51.93 -0.41 -0.56 16 38 H 0.06 -0.13 7.35 -51.93 -0.38 -0.51 16 39 H 0.06 -0.12 7.68 -51.93 -0.40 -0.52 16 40 H 0.13 -0.12 6.30 -52.49 -0.33 -0.45 16 41 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 42 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 43 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 44 H 0.13 0.12 8.06 -52.49 -0.42 -0.30 16 45 H 0.09 -0.42 8.08 -51.93 -0.42 -0.84 16 46 H 0.08 -0.26 8.14 -51.92 -0.42 -0.69 16 47 H 0.41 -0.17 8.96 -40.82 -0.37 -0.54 16 LS Contribution 394.14 15.07 5.94 5.94 Total: 0.00 -9.93 394.14 -11.98 -21.91 By element: Atomic # 1 Polarization: -5.66 SS G_CDS: -6.82 Total: -12.48 kcal Atomic # 6 Polarization: -0.19 SS G_CDS: -5.02 Total: -5.21 kcal Atomic # 7 Polarization: 0.85 SS G_CDS: -0.32 Total: 0.53 kcal Atomic # 8 Polarization: -4.78 SS G_CDS: -0.56 Total: -5.34 kcal Atomic # 14 Polarization: -0.16 SS G_CDS: -5.20 Total: -5.36 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -9.93 -11.98 -21.91 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16536076_14644196.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 13.320 kcal (2) G-P(sol) polarization free energy of solvation -9.933 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.387 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.975 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.908 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.588 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds