Wall clock time and date at job start Tue Mar 9 2021 13:19:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86303 * 109.47302 * 2 1 4 4 C 1.50705 * 109.47221 * 239.99728 * 2 1 3 5 5 C 1.38240 * 119.94771 * 300.00593 * 4 2 1 6 6 C 1.38167 * 120.05389 * 180.02562 * 5 4 2 7 7 N 1.48010 * 120.02294 * 179.97438 * 6 5 4 8 8 O 1.21801 * 120.00270 * 0.02562 * 7 6 5 9 9 O 1.21798 * 119.99860 * 180.02562 * 7 6 5 10 10 C 1.38701 * 119.94995 * 359.97074 * 6 5 4 11 11 O 1.35897 * 120.06011 * 179.97438 * 10 6 5 12 12 C 1.42903 * 117.00238 * 180.02562 * 11 10 6 13 13 C 1.50696 * 109.46957 * 180.02562 * 12 11 10 14 14 O 1.21281 * 120.00388 * 0.02562 * 13 12 11 15 15 N 1.34781 * 119.99994 * 179.97438 * 13 12 11 16 16 C 1.46493 * 120.00279 * 180.02562 * 15 13 12 17 17 H 1.09003 * 112.84820 * 336.19884 * 16 15 13 18 18 C 1.53781 * 113.61563 * 107.50461 * 16 15 13 19 19 C 1.54049 * 87.08031 * 139.97721 * 18 16 15 20 20 H 1.09000 * 113.61076 * 89.06984 * 19 18 16 21 21 C 1.52990 * 113.70090 * 220.05426 * 19 18 16 22 22 O 1.42903 * 109.47168 * 272.42623 * 21 19 18 23 23 C 1.35901 * 117.00064 * 179.97438 * 22 21 19 24 24 C 1.38730 * 120.05717 * 359.73078 * 23 22 21 25 25 C 1.38144 * 119.94637 * 179.70222 * 24 23 22 26 26 C 1.38273 * 120.05126 * 0.58621 * 25 24 23 27 27 C 1.38263 * 120.11228 * 359.68156 * 26 25 24 28 28 C 1.38147 * 120.05583 * 0.02608 * 27 26 25 29 29 C 1.53781 * 113.61552 * 205.00255 * 16 15 13 30 30 C 1.38763 * 119.88513 * 0.25798 * 10 6 5 31 31 C 1.38122 * 119.94242 * 359.51525 * 30 10 6 32 32 H 0.96692 * 113.99837 * 300.00082 * 1 2 3 33 33 H 1.09001 * 109.47446 * 120.00090 * 2 1 3 34 34 H 1.48500 * 109.99736 * 299.99915 * 3 2 1 35 35 H 1.48496 * 109.99849 * 61.31560 * 3 2 1 36 36 H 1.08006 * 119.96887 * 0.02562 * 5 4 2 37 37 H 1.09001 * 109.46871 * 60.00853 * 12 11 10 38 38 H 1.08992 * 109.47063 * 300.00545 * 12 11 10 39 39 H 0.97006 * 119.99341 * 0.02562 * 15 13 12 40 40 H 1.09005 * 113.61471 * 254.53304 * 18 16 15 41 41 H 1.09003 * 113.61469 * 25.43082 * 18 16 15 42 42 H 1.09007 * 109.47036 * 32.41747 * 21 19 18 43 43 H 1.08994 * 109.47734 * 152.42153 * 21 19 18 44 44 H 1.08000 * 120.02791 * 359.97438 * 24 23 22 45 45 H 1.07995 * 119.97878 * 180.31501 * 25 24 23 46 46 H 1.07994 * 119.94118 * 179.70737 * 26 25 24 47 47 H 1.07999 * 119.97413 * 179.97438 * 27 26 25 48 48 H 1.08005 * 120.02560 * 179.97438 * 28 27 26 49 49 H 1.09002 * 113.61445 * 334.56837 * 29 16 15 50 50 H 1.09002 * 113.61408 * 105.38567 * 29 16 15 51 51 H 1.07996 * 120.02651 * 179.71849 * 30 10 6 52 52 H 1.08001 * 119.96756 * 180.23739 * 31 30 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2305 5 6 1.5967 -2.0340 -1.4481 6 6 2.0565 -2.6876 -2.5752 7 7 1.6981 -4.1048 -2.8073 8 8 0.9973 -4.6951 -2.0049 9 8 2.1041 -4.6807 -3.8008 10 6 2.8540 -2.0147 -3.4890 11 8 3.3079 -2.6556 -4.5980 12 6 4.1248 -1.9006 -5.4950 13 6 4.5302 -2.7696 -6.6576 14 8 4.1560 -3.9219 -6.7128 15 7 5.3078 -2.2659 -7.6365 16 6 5.7014 -3.1105 -8.7669 17 1 5.6764 -4.1740 -8.5295 18 6 4.9864 -2.7537 -10.0808 19 6 6.3331 -2.9974 -10.7880 20 1 6.4799 -4.0304 -11.1034 21 6 6.6374 -1.9874 -11.8961 22 8 6.0687 -2.4430 -13.1253 23 6 6.2485 -1.6551 -14.2179 24 6 6.9530 -0.4650 -14.1080 25 6 7.1397 0.3312 -15.2213 26 6 6.6148 -0.0513 -16.4420 27 6 5.9076 -1.2342 -16.5530 28 6 5.7232 -2.0368 -15.4439 29 6 7.0058 -2.6615 -9.4465 30 6 3.1925 -0.6877 -3.2658 31 6 2.7264 -0.0373 -2.1399 32 1 -0.3933 0.4417 0.7650 33 1 1.7924 -0.5138 0.8900 34 1 1.5615 2.4678 -1.2085 35 1 1.5879 2.4585 1.2242 36 1 0.9752 -2.5574 -0.7366 37 1 5.0161 -1.5550 -4.9712 38 1 3.5633 -1.0417 -5.8623 39 1 5.6068 -1.3441 -7.5924 40 1 4.2101 -3.4651 -10.3625 41 1 4.6498 -1.7180 -10.1275 42 1 6.2084 -1.0201 -11.6339 43 1 7.7167 -1.8872 -12.0102 44 1 7.3589 -0.1634 -13.1537 45 1 7.6924 1.2552 -15.1374 46 1 6.7578 0.5748 -17.3102 47 1 5.4981 -1.5305 -17.5075 48 1 5.1704 -2.9605 -15.5310 49 1 7.2214 -1.6005 -9.3197 50 1 7.8601 -3.2976 -9.2150 51 1 3.8171 -0.1629 -3.9735 52 1 2.9865 0.9967 -1.9678 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16536076_4549638.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:19:11 Heat of formation + Delta-G solvation = -48.598553 kcal Electronic energy + Delta-G solvation = -37655.660941 eV Core-core repulsion = 32364.538118 eV Total energy + Delta-G solvation = -5291.122823 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 415.160 amu Computer time = 1.76 seconds Orbital eigenvalues (eV) -43.29993 -41.81590 -41.33758 -40.82943 -39.81207 -39.08076 -38.07085 -37.63470 -37.49500 -34.80739 -33.51487 -32.35591 -32.01725 -31.13653 -30.16157 -28.71989 -27.82585 -26.72529 -26.55433 -24.67320 -23.92436 -23.35864 -22.81155 -22.45608 -21.70340 -20.68669 -20.44178 -19.78651 -19.20884 -19.10036 -18.72236 -18.59136 -18.31182 -17.70272 -17.56121 -17.28139 -16.92184 -16.88561 -16.50933 -16.42627 -16.10478 -15.93543 -15.63203 -15.56204 -15.36150 -15.17381 -14.44361 -14.35375 -14.27888 -14.18719 -14.06810 -13.82371 -13.74889 -13.45655 -13.27906 -13.15039 -12.98192 -12.72108 -12.70009 -12.56793 -12.38277 -12.34837 -12.28216 -12.12923 -12.03601 -11.90649 -11.83043 -11.63599 -11.28761 -10.97770 -10.83162 -10.61734 -10.12506 -9.96456 -9.76991 -9.17407 -4.93306 -1.31362 -0.23938 0.15496 0.34704 0.38091 0.48389 1.21620 1.26212 1.44444 1.63226 1.97959 2.02825 2.16275 2.39056 2.83876 3.06102 3.22452 3.30606 3.40252 3.50884 3.54007 3.62253 3.70383 3.75488 3.78736 3.86918 3.90455 3.95478 3.97398 4.03630 4.23259 4.24247 4.28143 4.30518 4.32790 4.38615 4.49821 4.51544 4.55215 4.62304 4.69360 4.71776 4.75234 4.82406 4.85785 4.98129 5.04561 5.07342 5.07531 5.18736 5.20050 5.34461 5.47483 5.52377 5.60631 5.76278 5.86016 6.41904 6.46420 6.48006 6.52927 7.17129 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.562 6.562 2 C -0.095 4.095 3 Si 0.787 3.213 4 C -0.112 4.112 5 C -0.005 4.005 6 C -0.105 4.105 7 N 0.035 4.965 8 O -0.202 6.202 9 O -0.174 6.174 10 C 0.193 3.807 11 O -0.292 6.292 12 C 0.023 3.977 13 C 0.507 3.493 14 O -0.568 6.568 15 N -0.696 5.696 16 C 0.119 3.881 17 H 0.090 0.910 18 C -0.146 4.146 19 C -0.108 4.108 20 H 0.093 0.907 21 C 0.069 3.931 22 O -0.335 6.335 23 C 0.112 3.888 24 C -0.216 4.216 25 C -0.087 4.087 26 C -0.169 4.169 27 C -0.088 4.088 28 C -0.177 4.177 29 C -0.112 4.112 30 C -0.187 4.187 31 C -0.007 4.007 32 H 0.399 0.601 33 H 0.099 0.901 34 H -0.280 1.280 35 H -0.291 1.291 36 H 0.151 0.849 37 H 0.150 0.850 38 H 0.142 0.858 39 H 0.425 0.575 40 H 0.052 0.948 41 H 0.101 0.899 42 H 0.079 0.921 43 H 0.077 0.923 44 H 0.147 0.853 45 H 0.146 0.854 46 H 0.141 0.859 47 H 0.144 0.856 48 H 0.127 0.873 49 H 0.121 0.879 50 H 0.088 0.912 51 H 0.210 0.790 52 H 0.188 0.812 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.602 15.876 1.506 18.615 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.373 6.373 2 C -0.202 4.202 3 Si 0.690 3.310 4 C -0.114 4.114 5 C -0.024 4.024 6 C -0.191 4.191 7 N 0.545 4.455 8 O -0.410 6.410 9 O -0.388 6.388 10 C 0.143 3.857 11 O -0.202 6.202 12 C -0.053 4.053 13 C 0.293 3.707 14 O -0.446 6.446 15 N -0.350 5.350 16 C 0.014 3.986 17 H 0.109 0.891 18 C -0.185 4.185 19 C -0.127 4.127 20 H 0.111 0.889 21 C -0.006 4.006 22 O -0.249 6.249 23 C 0.067 3.933 24 C -0.234 4.234 25 C -0.105 4.105 26 C -0.188 4.188 27 C -0.106 4.106 28 C -0.196 4.196 29 C -0.150 4.150 30 C -0.205 4.205 31 C -0.024 4.024 32 H 0.250 0.750 33 H 0.117 0.883 34 H -0.207 1.207 35 H -0.218 1.218 36 H 0.168 0.832 37 H 0.167 0.833 38 H 0.160 0.840 39 H 0.264 0.736 40 H 0.071 0.929 41 H 0.120 0.880 42 H 0.097 0.903 43 H 0.095 0.905 44 H 0.165 0.835 45 H 0.164 0.836 46 H 0.158 0.842 47 H 0.162 0.838 48 H 0.145 0.855 49 H 0.139 0.861 50 H 0.107 0.893 51 H 0.226 0.774 52 H 0.204 0.796 Dipole moment (debyes) X Y Z Total from point charges 9.241 15.789 1.009 18.322 hybrid contribution -1.671 -0.981 0.489 1.999 sum 7.569 14.808 1.498 16.698 Atomic orbital electron populations 1.86544 1.18475 1.81009 1.51289 1.25252 0.84367 1.13139 0.97428 0.94243 0.89228 0.70123 0.77438 1.19472 1.01192 0.91956 0.98730 1.20830 0.93924 0.94881 0.92765 1.20851 1.13528 0.81578 1.03128 1.43876 0.98203 1.03951 0.99447 1.94494 1.35975 1.68338 1.42169 1.94677 1.56386 1.69320 1.18393 1.18951 0.89681 0.92066 0.84956 1.86473 1.63673 1.39726 1.30332 1.23159 0.98275 0.94419 0.89472 1.20588 0.78533 0.87631 0.83941 1.90852 1.54928 1.20446 1.78344 1.45591 1.51286 1.16559 1.21551 1.22408 0.96383 0.95949 0.83881 0.89143 1.23631 0.96876 1.02887 0.95074 1.22358 0.97372 1.00060 0.92898 0.88864 1.22987 0.98739 0.97997 0.80837 1.86065 1.74101 1.47709 1.17030 1.19245 0.95892 0.90788 0.87358 1.21518 1.04818 0.95653 1.01419 1.21337 0.97556 0.99580 0.92056 1.21429 1.00595 0.97869 0.98865 1.21277 0.97024 0.93990 0.98310 1.20709 1.05076 1.02629 0.91190 1.23290 0.96011 1.04430 0.91305 1.21801 1.06104 0.90471 1.02170 1.21675 0.89901 1.01061 0.89746 0.74965 0.88289 1.20691 1.21846 0.83168 0.83302 0.84039 0.73643 0.92933 0.88040 0.90259 0.90465 0.83540 0.83601 0.84152 0.83831 0.85472 0.86079 0.89315 0.77367 0.79573 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.92 12.74 -148.98 -1.90 -0.98 16 2 C -0.10 0.59 2.81 71.24 0.20 0.79 16 3 Si 0.79 -7.99 29.78 68.60 2.04 -5.94 16 4 C -0.11 0.39 5.42 -19.85 -0.11 0.28 16 5 C 0.00 -0.02 9.11 22.25 0.20 0.18 16 6 C -0.11 -0.89 6.87 36.47 0.25 -0.64 16 7 N 0.04 0.63 4.45 -46.24 -0.21 0.42 16 8 O -0.20 -3.97 18.45 18.89 0.35 -3.62 16 9 O -0.17 -3.96 17.24 25.61 0.44 -3.52 16 10 C 0.19 0.32 6.67 22.51 0.15 0.47 16 11 O -0.29 -1.48 7.68 -63.36 -0.49 -1.97 16 12 C 0.02 -0.17 5.22 71.23 0.37 0.20 16 13 C 0.51 0.46 7.91 87.66 0.69 1.15 16 14 O -0.57 -8.76 16.10 16.00 0.26 -8.51 16 15 N -0.70 5.03 5.35 -440.04 -2.36 2.67 16 16 C 0.12 -0.41 4.24 45.52 0.19 -0.22 16 17 H 0.09 0.31 7.46 -2.39 -0.02 0.29 16 18 C -0.15 0.38 7.44 31.21 0.23 0.62 16 19 C -0.11 0.48 4.02 -10.18 -0.04 0.44 16 20 H 0.09 -0.12 8.14 -2.39 -0.02 -0.14 16 21 C 0.07 -0.28 4.58 71.98 0.33 0.05 16 22 O -0.33 -1.38 10.14 -92.43 -0.94 -2.32 16 23 C 0.11 0.49 6.69 22.51 0.15 0.64 16 24 C -0.22 -0.09 9.04 22.37 0.20 0.12 16 25 C -0.09 0.05 10.04 22.26 0.22 0.27 16 26 C -0.17 -0.06 10.04 22.28 0.22 0.17 16 27 C -0.09 -0.16 10.04 22.25 0.22 0.06 16 28 C -0.18 -0.83 9.99 22.37 0.22 -0.61 16 29 C -0.11 1.06 7.39 31.12 0.23 1.29 16 30 C -0.19 1.82 9.04 22.37 0.20 2.02 16 31 C -0.01 0.06 8.66 22.25 0.19 0.26 16 32 H 0.40 -3.73 8.74 -74.06 -0.65 -4.38 16 33 H 0.10 -0.93 7.96 -2.39 -0.02 -0.95 16 34 H -0.28 1.42 7.11 99.48 0.71 2.12 16 35 H -0.29 1.15 7.11 99.48 0.71 1.86 16 36 H 0.15 0.76 7.61 -2.91 -0.02 0.74 16 37 H 0.15 -2.54 7.65 -2.39 -0.02 -2.56 16 38 H 0.14 -2.23 7.67 -2.39 -0.02 -2.25 16 39 H 0.42 -7.09 8.73 -92.70 -0.81 -7.90 16 40 H 0.05 0.16 8.14 -2.38 -0.02 0.14 16 41 H 0.10 -0.57 7.90 -2.39 -0.02 -0.59 16 42 H 0.08 -0.58 7.36 -2.38 -0.02 -0.60 16 43 H 0.08 -0.50 7.67 -2.39 -0.02 -0.51 16 44 H 0.15 -0.71 6.30 -2.91 -0.02 -0.73 16 45 H 0.15 -0.80 8.06 -2.91 -0.02 -0.82 16 46 H 0.14 -0.52 8.06 -2.91 -0.02 -0.54 16 47 H 0.14 -0.32 8.06 -2.91 -0.02 -0.35 16 48 H 0.13 0.50 8.06 -2.91 -0.02 0.48 16 49 H 0.12 -1.84 8.08 -2.39 -0.02 -1.86 16 50 H 0.09 -0.83 8.14 -2.39 -0.02 -0.85 16 51 H 0.21 -4.28 6.30 -2.91 -0.02 -4.30 16 52 H 0.19 -3.23 4.87 -2.91 -0.01 -3.25 16 Total: 0.00 -44.32 442.35 1.14 -43.18 By element: Atomic # 1 Polarization: -26.54 SS G_CDS: -0.42 Total: -26.96 kcal Atomic # 6 Polarization: 3.19 SS G_CDS: 4.35 Total: 7.53 kcal Atomic # 7 Polarization: 5.65 SS G_CDS: -2.56 Total: 3.09 kcal Atomic # 8 Polarization: -18.63 SS G_CDS: -2.27 Total: -20.91 kcal Atomic # 14 Polarization: -7.99 SS G_CDS: 2.04 Total: -5.94 kcal Total: -44.32 1.14 -43.18 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16536076_4549638.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.418 kcal (2) G-P(sol) polarization free energy of solvation -44.318 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.736 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.138 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.180 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.599 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.76 seconds