Wall clock time and date at job start Tue Mar 9 2021 13:20:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.33813 * 122.44692 * 2 1 4 4 C 1.50704 * 124.52616 * 0.02562 * 3 2 1 5 5 O 1.42899 * 109.46741 * 29.99398 * 4 3 2 6 6 Si 1.86295 * 109.47372 * 149.99661 * 4 3 2 7 7 S 1.70614 * 110.95494 * 179.78195 * 3 2 1 8 8 C 1.75827 * 91.56363 * 0.30725 * 7 3 2 9 9 C 1.46579 * 125.46336 * 179.97438 * 8 7 3 10 10 O 1.21706 * 120.00395 * 179.69622 * 9 8 7 11 11 N 1.34781 * 119.99887 * 359.68578 * 9 8 7 12 12 C 1.46493 * 120.00279 * 180.02562 * 11 9 8 13 13 H 1.09003 * 112.84820 * 336.19884 * 12 11 9 14 14 C 1.53781 * 113.61563 * 107.50461 * 12 11 9 15 15 C 1.54049 * 87.08031 * 139.97721 * 14 12 11 16 16 H 1.09000 * 113.61076 * 89.06984 * 15 14 12 17 17 C 1.52990 * 113.70090 * 220.05426 * 15 14 12 18 18 O 1.42903 * 109.47168 * 272.42623 * 17 15 14 19 19 C 1.35901 * 117.00064 * 179.97438 * 18 17 15 20 20 C 1.38730 * 120.05717 * 359.73078 * 19 18 17 21 21 C 1.38144 * 119.94637 * 179.70222 * 20 19 18 22 22 C 1.38273 * 120.05126 * 0.58621 * 21 20 19 23 23 C 1.38263 * 120.11228 * 359.68156 * 22 21 20 24 24 C 1.38147 * 120.05583 * 0.02608 * 23 22 21 25 25 C 1.53781 * 113.61552 * 205.00255 * 12 11 9 26 26 C 1.36651 * 109.08297 * 359.69713 * 8 7 3 27 27 H 1.09003 * 109.47245 * 270.00079 * 1 2 3 28 28 H 1.09006 * 109.46963 * 30.00503 * 1 2 3 29 29 H 1.09004 * 109.46587 * 150.00079 * 1 2 3 30 30 H 1.08997 * 109.46954 * 270.00226 * 4 3 2 31 31 H 0.96704 * 114.00153 * 60.01065 * 5 4 3 32 32 H 1.48508 * 109.99954 * 179.97438 * 6 4 3 33 33 H 1.48496 * 110.00277 * 301.32158 * 6 4 3 34 34 H 0.97006 * 119.99341 * 0.02562 * 11 9 8 35 35 H 1.09005 * 113.61471 * 254.53304 * 14 12 11 36 36 H 1.08996 * 113.61178 * 25.34646 * 14 12 11 37 37 H 1.09007 * 109.47036 * 32.41747 * 17 15 14 38 38 H 1.08994 * 109.47734 * 152.42153 * 17 15 14 39 39 H 1.08000 * 120.02791 * 359.97438 * 20 19 18 40 40 H 1.07995 * 119.97878 * 180.31501 * 21 20 19 41 41 H 1.07994 * 119.94118 * 179.70737 * 22 21 20 42 42 H 1.07997 * 119.97226 * 180.02562 * 23 22 21 43 43 H 1.08005 * 120.02560 * 179.97438 * 24 23 22 44 44 H 1.09002 * 113.61445 * 334.56837 * 25 12 11 45 45 H 1.09002 * 113.61408 * 105.38567 * 25 12 11 46 46 H 1.07997 * 123.35647 * 180.25495 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6355 2.5162 0.0006 5 8 0.3756 2.4979 0.6746 6 14 2.7927 3.6825 0.8787 7 16 3.8969 0.7893 0.0061 8 6 3.5938 -0.9426 -0.0008 9 6 4.6232 -1.9861 -0.0003 10 8 4.3002 -3.1596 0.0002 11 7 5.9274 -1.6462 -0.0006 12 6 6.9562 -2.6890 -0.0006 13 1 6.5993 -3.6357 0.4050 14 6 7.6904 -2.8301 -1.3445 15 6 8.9818 -3.0283 -0.5284 16 1 9.1784 -4.0683 -0.2679 17 6 10.2011 -2.3233 -1.1259 18 8 10.8334 -3.1863 -2.0733 19 6 11.9403 -2.7083 -2.7006 20 6 12.4049 -1.4329 -2.4143 21 6 13.5338 -0.9517 -3.0487 22 6 14.1935 -1.7356 -3.9772 23 6 13.7292 -3.0050 -4.2684 24 6 12.6042 -3.4930 -3.6323 25 6 8.2980 -2.2306 0.5946 26 6 2.2447 -1.1600 -0.0004 27 1 -0.3634 0.0000 1.0277 28 1 -0.3633 0.8900 -0.5139 29 1 -0.3633 -0.8901 -0.5139 30 1 1.4930 2.8508 -1.0270 31 1 0.4266 2.2093 1.5961 32 1 2.2230 5.0540 0.8855 33 1 3.0203 3.2196 2.2712 34 1 6.1847 -0.7109 -0.0007 35 1 7.3938 -3.7112 -1.9137 36 1 7.6856 -1.9187 -1.9423 37 1 9.8832 -1.4075 -1.6244 38 1 10.9053 -2.0786 -0.3308 39 1 11.8871 -0.8183 -1.6928 40 1 13.8989 0.0392 -2.8224 41 1 15.0731 -1.3558 -4.4756 42 1 14.2465 -3.6155 -4.9937 43 1 12.2417 -4.4845 -3.8604 44 1 8.4607 -1.1549 0.5276 45 1 8.4915 -2.6266 1.5916 46 1 1.8020 -2.1451 -0.0001 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16536076_6739946.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:20:28 Heat of formation + Delta-G solvation = -21.814366 kcal Electronic energy + Delta-G solvation = -28040.883143 eV Core-core repulsion = 23989.772644 eV Total energy + Delta-G solvation = -4051.110499 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.123 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -41.48197 -40.89518 -40.16111 -39.32849 -38.07863 -37.44635 -34.73602 -32.23135 -31.95722 -31.01670 -30.29967 -29.20401 -26.88158 -26.67778 -24.88034 -23.95919 -23.28559 -22.51795 -21.73636 -20.89827 -20.18187 -19.38847 -19.08985 -18.03802 -17.48006 -17.32897 -16.95034 -16.92256 -16.60679 -16.50912 -16.20867 -15.90491 -15.81102 -15.33575 -15.19705 -14.63445 -14.49100 -14.38473 -14.26844 -14.06880 -13.95029 -13.66310 -13.58548 -13.32645 -13.15211 -13.08582 -12.97969 -12.59680 -12.47549 -12.37837 -12.27074 -12.09058 -11.91722 -11.88228 -11.71384 -11.36802 -11.07306 -10.94274 -10.17505 -9.93205 -9.70777 -9.44874 -9.13096 -5.25798 -0.64625 0.26424 0.41190 0.53083 0.67524 1.00543 1.30904 1.43969 1.77805 1.94491 2.14830 2.22356 2.87573 3.08005 3.27251 3.37224 3.48247 3.63681 3.65724 3.73650 3.88253 3.93572 4.07988 4.13737 4.18361 4.22320 4.24026 4.28280 4.40220 4.47691 4.50018 4.52394 4.54838 4.59618 4.65532 4.74107 4.75176 4.83629 4.86024 4.95593 5.00481 5.07514 5.12650 5.35306 5.36888 5.41322 5.42683 5.49028 5.63152 5.84521 6.15021 6.33629 6.47738 7.08316 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C -0.095 4.095 3 C -0.235 4.235 4 C -0.032 4.032 5 O -0.517 6.517 6 Si 0.662 3.338 7 S 0.200 5.800 8 C -0.263 4.263 9 C 0.594 3.406 10 O -0.524 6.524 11 N -0.717 5.717 12 C 0.124 3.876 13 H 0.122 0.878 14 C -0.145 4.145 15 C -0.107 4.107 16 H 0.109 0.891 17 C 0.072 3.928 18 O -0.312 6.312 19 C 0.129 3.871 20 C -0.211 4.211 21 C -0.081 4.081 22 C -0.160 4.160 23 C -0.080 4.080 24 C -0.153 4.153 25 C -0.136 4.136 26 C -0.047 4.047 27 H 0.069 0.931 28 H 0.084 0.916 29 H 0.063 0.937 30 H 0.129 0.871 31 H 0.378 0.622 32 H -0.237 1.237 33 H -0.247 1.247 34 H 0.399 0.601 35 H 0.079 0.921 36 H 0.088 0.912 37 H 0.064 0.936 38 H 0.065 0.935 39 H 0.126 0.874 40 H 0.125 0.875 41 H 0.124 0.876 42 H 0.130 0.870 43 H 0.130 0.870 44 H 0.091 0.909 45 H 0.084 0.916 46 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.060 4.437 0.430 5.407 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.108 4.108 3 C -0.355 4.355 4 C -0.144 4.144 5 O -0.324 6.324 6 Si 0.560 3.440 7 S 0.468 5.532 8 C -0.382 4.382 9 C 0.380 3.620 10 O -0.402 6.402 11 N -0.368 5.368 12 C 0.020 3.980 13 H 0.140 0.860 14 C -0.184 4.184 15 C -0.126 4.126 16 H 0.127 0.873 17 C -0.003 4.003 18 O -0.226 6.226 19 C 0.084 3.916 20 C -0.230 4.230 21 C -0.099 4.099 22 C -0.178 4.178 23 C -0.098 4.098 24 C -0.172 4.172 25 C -0.175 4.175 26 C -0.080 4.080 27 H 0.088 0.912 28 H 0.103 0.897 29 H 0.082 0.918 30 H 0.147 0.853 31 H 0.227 0.773 32 H -0.161 1.161 33 H -0.170 1.170 34 H 0.234 0.766 35 H 0.098 0.902 36 H 0.106 0.894 37 H 0.083 0.917 38 H 0.084 0.916 39 H 0.144 0.856 40 H 0.143 0.857 41 H 0.142 0.858 42 H 0.147 0.853 43 H 0.148 0.852 44 H 0.109 0.891 45 H 0.103 0.897 46 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 3.950 5.077 0.539 6.455 hybrid contribution -1.913 -0.656 0.740 2.154 sum 2.037 4.421 1.279 5.033 Atomic orbital electron populations 1.20644 0.88670 1.03465 1.02679 1.18718 0.98422 0.90631 1.03046 1.24421 0.98673 1.00721 1.11660 1.24435 0.91225 0.95195 1.03553 1.86642 1.27518 1.89188 1.29057 0.95511 0.84931 0.80030 0.83534 1.82632 1.03012 0.98518 1.69018 1.24612 0.97980 0.96899 1.18746 1.16980 0.81698 0.87414 0.75879 1.90863 1.81577 1.18197 1.49520 1.45830 1.05264 1.09951 1.75753 1.22534 0.85478 0.92765 0.97245 0.86034 1.23619 0.94453 1.03392 0.96930 1.22398 0.92228 1.01269 0.96675 0.87325 1.22798 0.93903 0.92873 0.90765 1.86083 1.38958 1.43410 1.54161 1.19030 0.87007 0.92533 0.93015 1.21264 1.00561 0.95991 1.05145 1.20991 0.94189 0.99553 0.95128 1.21121 1.01441 0.95075 1.00143 1.21027 0.94934 0.95655 0.98209 1.20497 0.97335 1.00853 0.98505 1.23372 0.94145 1.01012 0.98938 1.20728 0.90938 1.00120 0.96237 0.91223 0.89687 0.91756 0.85349 0.77308 1.16067 1.17036 0.76633 0.90196 0.89384 0.91744 0.91644 0.85573 0.85737 0.85805 0.85254 0.85163 0.89092 0.89701 0.82747 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.05 8.67 36.01 0.31 0.36 16 2 C -0.10 -0.04 5.75 -106.45 -0.61 -0.65 16 3 C -0.24 0.15 5.54 -35.86 -0.20 -0.05 16 4 C -0.03 0.05 2.76 36.01 0.10 0.15 16 5 O -0.52 0.36 9.85 -35.23 -0.35 0.02 16 6 Si 0.66 -1.36 31.30 -169.99 -5.32 -6.68 16 7 S 0.20 -0.34 19.78 -107.50 -2.13 -2.46 16 8 C -0.26 -0.32 6.45 -36.79 -0.24 -0.56 16 9 C 0.59 1.49 7.78 -12.89 -0.10 1.39 16 10 O -0.52 -3.29 16.44 5.18 0.09 -3.21 16 11 N -0.72 0.43 5.35 -54.35 -0.29 0.14 16 12 C 0.12 -0.12 4.24 -67.12 -0.28 -0.40 16 13 H 0.12 0.08 7.46 -51.93 -0.39 -0.31 16 14 C -0.15 0.16 7.44 -25.78 -0.19 -0.03 16 15 C -0.11 0.20 4.02 -89.67 -0.36 -0.16 16 16 H 0.11 -0.16 8.14 -51.93 -0.42 -0.58 16 17 C 0.07 -0.09 4.58 37.15 0.17 0.08 16 18 O -0.31 -0.57 10.14 -19.43 -0.20 -0.76 16 19 C 0.13 0.27 6.69 -39.22 -0.26 0.01 16 20 C -0.21 -0.18 9.04 -39.43 -0.36 -0.53 16 21 C -0.08 -0.04 10.04 -39.60 -0.40 -0.44 16 22 C -0.16 -0.09 10.04 -39.56 -0.40 -0.49 16 23 C -0.08 -0.06 10.04 -39.61 -0.40 -0.46 16 24 C -0.15 -0.27 9.99 -39.43 -0.39 -0.67 16 25 C -0.14 0.43 7.39 -25.92 -0.19 0.24 16 26 C -0.05 -0.07 9.80 -40.43 -0.40 -0.47 16 27 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 28 H 0.08 0.00 6.42 -51.93 -0.33 -0.33 16 29 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 30 H 0.13 -0.31 7.96 -51.93 -0.41 -0.72 16 31 H 0.38 -1.15 8.66 45.56 0.39 -0.76 16 32 H -0.24 -0.19 7.11 56.52 0.40 0.21 16 33 H -0.25 -0.04 7.11 56.52 0.40 0.36 16 34 H 0.40 -1.22 7.84 -40.82 -0.32 -1.54 16 35 H 0.08 0.02 8.14 -51.93 -0.42 -0.41 16 36 H 0.09 -0.13 7.91 -51.93 -0.41 -0.55 16 37 H 0.06 -0.14 7.36 -51.93 -0.38 -0.52 16 38 H 0.07 -0.14 7.67 -51.93 -0.40 -0.54 16 39 H 0.13 -0.14 6.30 -52.49 -0.33 -0.47 16 40 H 0.12 -0.19 8.06 -52.49 -0.42 -0.61 16 41 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 42 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 43 H 0.13 0.11 8.06 -52.48 -0.42 -0.31 16 44 H 0.09 -0.41 8.08 -51.93 -0.42 -0.83 16 45 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 46 H 0.15 0.24 8.06 -52.49 -0.42 -0.18 16 LS Contribution 394.00 15.07 5.94 5.94 Total: 0.00 -7.73 394.00 -12.88 -20.61 By element: Atomic # 1 Polarization: -4.48 SS G_CDS: -6.43 Total: -10.91 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: -4.20 Total: -2.69 kcal Atomic # 7 Polarization: 0.43 SS G_CDS: -0.29 Total: 0.14 kcal Atomic # 8 Polarization: -3.49 SS G_CDS: -0.46 Total: -3.95 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.32 Total: -6.68 kcal Atomic # 16 Polarization: -0.34 SS G_CDS: -2.13 Total: -2.46 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -7.73 -12.88 -20.61 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16536076_6739946.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.200 kcal (2) G-P(sol) polarization free energy of solvation -7.732 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.932 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.882 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.614 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.814 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds