Wall clock time and date at job start Tue Mar 9 2021 12:56:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.35459 * 125.56192 * 2 1 4 4 C 1.50694 * 126.07161 * 359.95261 * 3 2 1 5 5 O 1.42892 * 109.47392 * 156.96650 * 4 3 2 6 6 Si 1.86308 * 109.46917 * 36.96897 * 4 3 2 7 7 C 1.39835 * 107.86072 * 180.22016 * 3 2 1 8 8 C 1.50704 * 126.45693 * 179.75936 * 7 3 2 9 9 C 1.37879 * 107.08636 * 359.60615 * 7 3 2 10 10 C 1.46680 * 126.23180 * 180.14300 * 9 7 3 11 11 O 1.21693 * 120.00014 * 0.31775 * 10 9 7 12 12 N 1.34777 * 119.99636 * 180.31834 * 10 9 7 13 13 C 1.46498 * 119.99793 * 180.02562 * 12 10 9 14 14 H 1.09005 * 112.85005 * 25.32807 * 13 12 10 15 15 C 1.53779 * 113.61602 * 156.52558 * 13 12 10 16 16 C 1.53785 * 87.08180 * 139.97872 * 15 13 12 17 17 H 1.09002 * 113.61106 * 89.11887 * 16 15 13 18 18 C 1.53002 * 113.61608 * 219.93453 * 16 15 13 19 19 N 1.46898 * 109.46904 * 185.00122 * 18 16 15 20 20 H 1.00896 * 109.47098 * 55.00221 * 19 18 16 21 21 C 1.46898 * 109.46744 * 175.00264 * 19 18 16 22 22 C 1.46903 * 109.46988 * 295.00047 * 19 18 16 23 23 C 1.53778 * 113.61415 * 254.13308 * 13 12 10 24 24 N 1.35534 * 125.56638 * 179.97438 * 2 1 3 25 25 H 1.08999 * 109.47076 * 84.07963 * 1 2 3 26 26 H 1.09000 * 109.47065 * 204.07947 * 1 2 3 27 27 H 1.08999 * 109.47194 * 324.08305 * 1 2 3 28 28 H 1.09003 * 109.47306 * 276.97282 * 4 3 2 29 29 H 0.96697 * 114.00287 * 300.00756 * 5 4 3 30 30 H 1.48493 * 110.00052 * 58.68043 * 6 4 3 31 31 H 1.48504 * 109.99908 * 180.02562 * 6 4 3 32 32 H 1.09003 * 109.46993 * 89.99542 * 8 7 3 33 33 H 1.08996 * 109.46930 * 209.99837 * 8 7 3 34 34 H 1.09002 * 109.46862 * 329.99573 * 8 7 3 35 35 H 0.97000 * 120.00316 * 359.97438 * 12 10 9 36 36 H 1.08999 * 113.61656 * 254.52727 * 15 13 12 37 37 H 1.09003 * 113.61164 * 25.35073 * 15 13 12 38 38 H 1.08997 * 109.47290 * 305.00262 * 18 16 15 39 39 H 1.08995 * 109.46703 * 64.99959 * 18 16 15 40 40 H 1.09000 * 109.47480 * 59.99570 * 21 19 18 41 41 H 1.09003 * 109.47390 * 180.02562 * 21 19 18 42 42 H 1.09008 * 109.47084 * 299.99697 * 21 19 18 43 43 H 1.08994 * 109.46931 * 299.99739 * 22 19 18 44 44 H 1.08999 * 109.46763 * 60.00536 * 22 19 18 45 45 H 1.09003 * 109.46413 * 180.02562 * 22 19 18 46 46 H 1.08999 * 113.61697 * 334.56833 * 23 13 12 47 47 H 1.09005 * 113.61580 * 105.46799 * 23 13 12 48 48 H 0.96998 * 125.67100 * 0.04475 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1019 0.0000 4 6 1.8200 2.5321 -0.0010 5 8 2.8462 3.3751 0.5264 6 14 0.2917 2.6798 1.0543 7 6 3.6270 0.6768 -0.0051 8 6 4.8486 1.5592 -0.0121 9 6 3.6122 -0.7019 0.0009 10 6 4.7860 -1.5815 0.0015 11 8 5.9049 -1.1030 0.0023 12 7 4.6253 -2.9196 0.0013 13 6 5.7976 -3.7982 0.0025 14 1 6.6804 -3.3255 0.4332 15 6 5.5150 -5.2019 0.5634 16 6 6.4162 -5.7456 -0.5579 17 1 7.4688 -5.8059 -0.2814 18 6 5.8938 -7.0360 -1.1927 19 7 6.8767 -7.5374 -2.1624 20 1 7.7714 -7.6457 -1.7089 21 6 6.4313 -8.8366 -2.6837 22 6 7.0020 -6.5818 -3.2712 23 6 6.0610 -4.4758 -1.3526 24 7 2.2953 -1.1025 0.0005 25 1 -0.3633 0.1060 -1.0222 26 1 -0.3633 -0.9382 0.4193 27 1 -0.3633 0.8323 0.6028 28 1 1.5878 2.8372 -1.0214 29 1 3.1039 3.1607 1.4334 30 1 0.5869 2.2365 2.4404 31 1 -0.1870 4.0855 1.0610 32 1 5.1476 1.7739 1.0140 33 1 5.6619 1.0496 -0.5285 34 1 4.6197 2.4925 -0.5266 35 1 3.7334 -3.3011 0.0011 36 1 5.9178 -5.3617 1.5635 37 1 4.4722 -5.5061 0.4734 38 1 5.7349 -7.7844 -0.4164 39 1 4.9512 -6.8347 -1.7016 40 1 5.4647 -8.7196 -3.1735 41 1 7.1608 -9.2089 -3.4029 42 1 6.3383 -9.5456 -1.8609 43 1 6.0354 -6.4649 -3.7610 44 1 7.3325 -5.6178 -2.8843 45 1 7.7310 -6.9542 -3.9909 46 1 5.1681 -4.5818 -1.9687 47 1 6.9040 -4.0503 -1.8971 48 1 1.9833 -2.0209 0.0003 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_12297754.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:33 Heat of formation + Delta-G solvation = 100.591192 kcal Electronic energy + Delta-G solvation = -26301.741777 eV Core-core repulsion = 22671.017030 eV Total energy + Delta-G solvation = -3630.724747 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.197 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -42.73752 -42.19631 -40.59033 -38.96615 -37.96342 -34.94257 -33.69774 -33.00342 -30.23118 -29.51459 -29.35738 -27.60709 -26.73378 -26.53078 -25.61226 -23.83999 -22.30657 -21.28888 -20.79208 -20.30853 -19.31410 -19.07854 -18.09181 -17.72352 -17.42808 -16.80062 -16.74819 -16.56602 -16.08230 -15.95256 -15.71288 -15.14118 -14.83343 -14.53597 -14.39471 -14.23749 -13.94766 -13.83205 -13.71779 -13.59804 -13.54307 -13.43486 -13.32741 -13.28191 -13.16024 -13.07883 -12.85361 -12.62963 -12.45270 -12.33044 -11.93923 -11.82102 -11.52881 -11.21416 -10.67074 -10.21715 -9.53945 -9.02273 -4.80930 0.30254 1.02558 1.16210 1.58740 1.63556 1.90989 2.03324 2.12669 2.21586 2.88112 2.95666 3.19289 3.31970 3.36985 3.44632 3.69190 3.72455 3.79047 3.83067 3.92580 3.96141 4.13733 4.17054 4.20261 4.32478 4.39348 4.41998 4.46023 4.57022 4.59738 4.65366 4.67782 4.72883 4.75298 4.77101 4.79856 4.82077 4.84960 4.87771 4.92137 5.03604 5.06401 5.12372 5.20752 5.27500 5.46672 5.64773 5.77474 6.34124 6.46815 6.56045 7.06779 Molecular weight = 309.20amu Principal moments of inertia in cm(-1) A = 0.027203 B = 0.002876 C = 0.002734 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1029.036763 B = 9734.924179 C =10238.003351 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 C 0.084 3.916 3 C -0.232 4.232 4 C -0.043 4.043 5 O -0.550 6.550 6 Si 0.735 3.265 7 C -0.078 4.078 8 C -0.085 4.085 9 C -0.078 4.078 10 C 0.590 3.410 11 O -0.568 6.568 12 N -0.706 5.706 13 C 0.096 3.904 14 H 0.084 0.916 15 C -0.126 4.126 16 C -0.116 4.116 17 H 0.125 0.875 18 C 0.013 3.987 19 N -0.370 5.370 20 H 0.438 0.562 21 C -0.046 4.046 22 C -0.057 4.057 23 C -0.152 4.152 24 N -0.512 5.512 25 H 0.121 0.879 26 H 0.112 0.888 27 H 0.087 0.913 28 H 0.117 0.883 29 H 0.379 0.621 30 H -0.297 1.297 31 H -0.310 1.310 32 H 0.057 0.943 33 H 0.059 0.941 34 H 0.068 0.932 35 H 0.411 0.589 36 H 0.078 0.922 37 H 0.116 0.884 38 H 0.151 0.849 39 H 0.141 0.859 40 H 0.120 0.880 41 H 0.123 0.877 42 H 0.127 0.873 43 H 0.122 0.878 44 H 0.113 0.887 45 H 0.126 0.874 46 H 0.111 0.889 47 H 0.075 0.925 48 H 0.436 0.564 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.229 -35.537 -9.932 37.267 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C -0.035 4.035 3 C -0.238 4.238 4 C -0.153 4.153 5 O -0.357 6.357 6 Si 0.642 3.358 7 C -0.086 4.086 8 C -0.142 4.142 9 C -0.190 4.190 10 C 0.378 3.622 11 O -0.447 6.447 12 N -0.357 5.357 13 C -0.009 4.009 14 H 0.102 0.898 15 C -0.164 4.164 16 C -0.135 4.135 17 H 0.143 0.857 18 C -0.109 4.109 19 N 0.053 4.947 20 H 0.275 0.725 21 C -0.188 4.188 22 C -0.200 4.200 23 C -0.190 4.190 24 N -0.111 5.111 25 H 0.139 0.861 26 H 0.131 0.869 27 H 0.103 0.897 28 H 0.135 0.865 29 H 0.228 0.772 30 H -0.225 1.225 31 H -0.239 1.239 32 H 0.076 0.924 33 H 0.078 0.922 34 H 0.086 0.914 35 H 0.248 0.752 36 H 0.097 0.903 37 H 0.134 0.866 38 H 0.168 0.832 39 H 0.159 0.841 40 H 0.138 0.862 41 H 0.141 0.859 42 H 0.146 0.854 43 H 0.141 0.859 44 H 0.132 0.868 45 H 0.144 0.856 46 H 0.129 0.871 47 H 0.094 0.906 48 H 0.278 0.722 Dipole moment (debyes) X Y Z Total from point charges 5.389 -34.793 -9.962 36.590 hybrid contribution 1.234 0.651 1.108 1.782 sum 6.623 -34.141 -8.854 35.887 Atomic orbital electron populations 1.20789 0.84533 1.03322 1.05617 1.20585 0.94972 0.85001 1.02990 1.19679 0.92993 0.95533 1.15627 1.24443 0.98701 0.86734 1.05383 1.86530 1.56695 1.58360 1.34115 0.94544 0.82016 0.80770 0.78485 1.19922 0.94996 0.92053 1.01664 1.20268 0.94175 0.98223 1.01523 1.19980 0.84130 0.93524 1.21414 1.17121 0.86661 0.82769 0.75605 1.90841 1.25864 1.76038 1.52007 1.45669 1.10817 1.04177 1.75082 1.22738 0.88877 0.89683 0.99580 0.89761 1.23325 1.02212 0.91718 0.99186 1.22721 1.02170 0.92045 0.96589 0.85685 1.23888 0.93932 0.98452 0.94639 1.44839 1.18787 1.15308 1.15735 0.72484 1.24130 1.06663 0.82468 1.05511 1.24270 1.09412 0.95586 0.90710 1.23884 1.03509 0.95368 0.96254 1.41579 1.03776 1.09062 1.56728 0.86106 0.86917 0.89663 0.86487 0.77231 1.22471 1.23881 0.92405 0.92239 0.91365 0.75158 0.90342 0.86592 0.83164 0.84139 0.86153 0.85869 0.85420 0.85912 0.86812 0.85590 0.87077 0.90586 0.72219 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 2.53 9.45 71.24 0.67 3.21 16 2 C 0.08 -1.80 6.81 41.34 0.28 -1.52 16 3 C -0.23 3.13 5.30 -20.12 -0.11 3.02 16 4 C -0.04 0.50 3.05 71.23 0.22 0.72 16 5 O -0.55 3.70 10.28 -148.98 -1.53 2.17 16 6 Si 0.74 -9.67 27.80 68.60 1.91 -7.77 16 7 C -0.08 0.78 6.16 -19.56 -0.12 0.66 16 8 C -0.08 0.55 8.61 71.24 0.61 1.16 16 9 C -0.08 1.28 7.06 40.35 0.28 1.56 16 10 C 0.59 -10.18 7.79 86.45 0.67 -9.51 16 11 O -0.57 4.38 14.43 -4.33 -0.06 4.32 16 12 N -0.71 21.23 5.36 -444.00 -2.38 18.85 16 13 C 0.10 -3.35 4.21 45.52 0.19 -3.16 16 14 H 0.08 -2.25 7.50 -2.38 -0.02 -2.26 16 15 C -0.13 5.65 7.39 31.12 0.23 5.88 16 16 C -0.12 6.22 3.30 -10.21 -0.03 6.19 16 17 H 0.13 -6.83 8.09 -2.39 -0.02 -6.85 16 18 C 0.01 -0.81 4.57 86.30 0.39 -0.41 16 19 N -0.37 24.65 0.66 -948.84 -0.62 24.02 16 20 H 0.44 -30.57 8.40 -89.70 -0.75 -31.32 16 21 C -0.05 2.98 9.19 127.69 1.17 4.16 16 22 C -0.06 3.55 8.57 127.69 1.09 4.65 16 23 C -0.15 6.86 5.70 31.18 0.18 7.04 16 24 N -0.51 12.66 5.99 -171.92 -1.03 11.63 16 25 H 0.12 -3.90 8.14 -2.39 -0.02 -3.92 16 26 H 0.11 -3.84 8.14 -2.39 -0.02 -3.85 16 27 H 0.09 -2.30 2.77 -2.39 -0.01 -2.31 16 28 H 0.12 -1.53 7.96 -2.39 -0.02 -1.55 16 29 H 0.38 -3.99 8.58 -74.06 -0.64 -4.63 16 30 H -0.30 2.18 7.11 99.48 0.71 2.88 16 31 H -0.31 1.07 7.11 99.48 0.71 1.78 16 32 H 0.06 -0.35 8.14 -2.39 -0.02 -0.37 16 33 H 0.06 -0.23 6.50 -2.39 -0.02 -0.25 16 34 H 0.07 -0.33 6.79 -2.39 -0.02 -0.35 16 35 H 0.41 -15.33 7.84 -92.71 -0.73 -16.06 16 36 H 0.08 -3.21 8.14 -2.39 -0.02 -3.23 16 37 H 0.12 -5.62 8.07 -2.39 -0.02 -5.64 16 38 H 0.15 -9.77 8.09 -2.39 -0.02 -9.79 16 39 H 0.14 -9.02 7.80 -2.39 -0.02 -9.03 16 40 H 0.12 -7.70 8.14 -2.39 -0.02 -7.72 16 41 H 0.12 -7.85 8.14 -2.39 -0.02 -7.87 16 42 H 0.13 -8.30 8.11 -2.38 -0.02 -8.31 16 43 H 0.12 -7.57 8.11 -2.39 -0.02 -7.59 16 44 H 0.11 -6.67 5.13 -2.39 -0.01 -6.68 16 45 H 0.13 -7.77 8.14 -2.39 -0.02 -7.79 16 46 H 0.11 -5.34 7.91 -2.39 -0.02 -5.36 16 47 H 0.08 -3.19 7.20 -2.38 -0.02 -3.21 16 48 H 0.44 -14.94 8.19 -92.71 -0.76 -15.70 16 Total: 1.00 -90.29 365.94 0.19 -90.10 By element: Atomic # 1 Polarization: -165.14 SS G_CDS: -1.84 Total: -166.98 kcal Atomic # 6 Polarization: 17.90 SS G_CDS: 5.75 Total: 23.65 kcal Atomic # 7 Polarization: 58.54 SS G_CDS: -4.03 Total: 54.50 kcal Atomic # 8 Polarization: 8.08 SS G_CDS: -1.59 Total: 6.48 kcal Atomic # 14 Polarization: -9.67 SS G_CDS: 1.91 Total: -7.77 kcal Total: -90.29 0.19 -90.10 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_12297754.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 190.695 kcal (2) G-P(sol) polarization free energy of solvation -90.292 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 100.402 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.189 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -90.103 kcal (6) G-S(sol) free energy of system = (1) + (5) 100.591 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds