Wall clock time and date at job start Tue Mar 9 2021 16:02:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53000 * 109.47113 * 2 1 4 4 C 1.53006 * 109.46737 * 119.99242 * 2 1 3 5 5 H 1.08995 * 109.47312 * 300.00023 * 4 2 1 6 6 C 1.52998 * 109.47063 * 60.00518 * 4 2 1 7 7 C 1.52998 * 109.47271 * 180.02562 * 6 4 2 8 8 C 1.53005 * 109.46878 * 299.99723 * 7 6 4 9 9 H 1.09002 * 109.47189 * 179.97438 * 8 7 6 10 10 N 1.46497 * 109.47246 * 300.00276 * 8 7 6 11 11 C 1.34781 * 120.00115 * 204.99926 * 10 8 7 12 12 O 1.21593 * 119.99676 * 359.97438 * 11 10 8 13 13 C 1.47569 * 120.00051 * 179.97438 * 11 10 8 14 14 C 1.40204 * 119.83506 * 0.22588 * 13 11 10 15 15 C 1.36233 * 120.37861 * 180.24007 * 14 13 11 16 16 C 1.39878 * 119.95960 * 359.77954 * 15 14 13 17 17 C 1.46262 * 133.84063 * 180.02562 * 16 15 14 18 18 C 1.50691 * 126.48047 * 359.97385 * 17 16 15 19 19 O 1.42900 * 109.47401 * 75.02475 * 18 17 16 20 20 Si 1.86308 * 109.46832 * 195.02524 * 18 17 16 21 21 C 1.34453 * 107.03470 * 179.97438 * 17 16 15 22 22 N 1.36571 * 109.98784 * 0.02562 * 21 17 16 23 23 C 1.37833 * 109.85601 * 359.97438 * 22 21 17 24 24 C 1.38650 * 133.37749 * 180.02562 * 23 22 21 25 25 C 1.53007 * 109.46975 * 59.99944 * 8 7 6 26 26 C 1.52992 * 109.47062 * 299.99853 * 25 8 7 27 27 H 1.08995 * 109.47239 * 300.00690 * 1 2 3 28 28 H 1.09007 * 109.46614 * 60.00613 * 1 2 3 29 29 H 1.09001 * 109.47046 * 180.02562 * 1 2 3 30 30 H 1.08990 * 109.47868 * 239.99617 * 2 1 3 31 31 H 1.08998 * 109.47152 * 179.97438 * 3 2 1 32 32 H 1.09007 * 109.46880 * 299.99224 * 3 2 1 33 33 H 1.08998 * 109.47563 * 59.98790 * 3 2 1 34 34 H 1.09004 * 109.46911 * 59.99828 * 6 4 2 35 35 H 1.09004 * 109.46992 * 299.99984 * 6 4 2 36 36 H 1.08991 * 109.47086 * 180.02562 * 7 6 4 37 37 H 1.08995 * 109.47219 * 59.99435 * 7 6 4 38 38 H 0.97000 * 119.99990 * 24.99746 * 10 8 7 39 39 H 1.08001 * 119.80939 * 0.02562 * 14 13 11 40 40 H 1.07999 * 120.01957 * 179.75381 * 15 14 13 41 41 H 1.09001 * 109.47572 * 315.02390 * 18 17 16 42 42 H 0.96710 * 113.99621 * 59.99983 * 19 18 17 43 43 H 1.48494 * 110.00106 * 58.68361 * 20 18 17 44 44 H 1.48506 * 109.99547 * 180.02562 * 20 18 17 45 45 H 1.07998 * 125.01125 * 180.02562 * 21 17 16 46 46 H 0.96998 * 125.07065 * 179.97438 * 22 21 17 47 47 H 1.08002 * 120.16454 * 359.92463 * 24 23 22 48 48 H 1.09004 * 109.46787 * 59.99925 * 25 8 7 49 49 H 1.09004 * 109.47023 * 179.97438 * 25 8 7 50 50 H 1.08995 * 109.47596 * 299.99876 * 26 25 8 51 51 H 1.09001 * 109.46915 * 180.02562 * 26 25 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7211 1.2494 5 1 1.6766 -0.2072 2.1393 6 6 1.5300 -2.1636 1.2495 7 6 2.0393 -2.8846 2.4991 8 6 3.5694 -2.8846 2.4999 9 1 3.9323 -3.3978 3.3904 10 7 4.0583 -3.5754 1.3041 11 6 5.2803 -4.1439 1.3066 12 8 5.9771 -4.0830 2.3012 13 6 5.7726 -4.8403 0.1022 14 6 4.9681 -4.9043 -1.0443 15 6 5.4095 -5.5485 -2.1605 16 6 6.6739 -6.1466 -2.1679 17 6 7.4347 -6.8952 -3.1679 18 6 6.9873 -7.2314 -4.5670 19 8 7.0665 -6.0632 -5.3861 20 14 8.0902 -8.5585 -5.2696 21 6 8.6088 -7.2267 -2.6026 22 7 8.6613 -6.7521 -1.3231 23 6 7.4931 -6.0851 -1.0228 24 6 7.0359 -5.4277 0.1091 25 6 4.0793 -1.4420 2.4998 26 6 3.5700 -0.7211 1.2501 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8901 29 1 -0.3633 -1.0277 0.0005 30 1 1.8934 -0.5138 -0.8898 31 1 3.1300 1.4425 0.0005 32 1 1.6767 1.9563 -0.8901 33 1 1.6765 1.9565 0.8898 34 1 1.8934 -2.6775 0.3595 35 1 0.4399 -2.1636 1.2494 36 1 1.6764 -3.9123 2.4989 37 1 1.6756 -2.3705 3.3888 38 1 3.5025 -3.6236 0.5106 39 1 3.9915 -4.4432 -1.0413 40 1 4.7834 -5.5977 -3.0392 41 1 5.9580 -7.5894 -4.5433 42 1 7.9559 -5.6893 -5.4530 43 1 8.0412 -9.7678 -4.4092 44 1 7.6597 -8.8986 -6.6496 45 1 9.3946 -7.7858 -3.0887 46 1 9.4092 -6.8673 -0.7162 47 1 7.6543 -5.3748 0.9930 48 1 3.7155 -0.9280 3.3895 49 1 5.1694 -1.4420 2.5007 50 1 3.9337 -1.2351 0.3605 51 1 3.9337 0.3064 1.2498 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16623128_12335838.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 16:02:55 Heat of formation + Delta-G solvation = -30.144297 kcal Electronic energy + Delta-G solvation = -30335.969067 eV Core-core repulsion = 26393.978432 eV Total energy + Delta-G solvation = -3941.990634 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.193 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -42.46640 -41.30560 -39.68734 -37.87615 -37.44718 -36.57596 -33.73054 -33.22866 -31.95849 -30.87821 -30.68769 -29.42745 -28.07133 -26.51565 -24.98743 -23.75364 -23.59879 -23.38429 -21.66490 -20.89482 -20.79626 -20.14046 -19.41141 -18.40493 -17.66377 -17.01655 -16.86924 -16.71780 -16.16216 -16.04666 -15.62420 -15.54245 -15.23854 -15.19613 -14.99197 -14.81411 -14.72260 -14.61210 -14.31460 -14.29315 -14.10629 -14.00527 -13.40779 -13.14855 -13.11738 -13.06508 -12.66071 -12.59063 -12.30201 -12.25503 -12.22188 -12.07382 -12.05663 -11.90581 -11.75246 -11.36696 -11.00685 -10.85030 -10.80850 -10.72882 -10.34844 -9.94674 -9.32739 -8.79270 -5.10086 -0.22550 0.42161 1.28972 1.38991 1.62403 1.91789 1.97240 2.08159 2.32494 2.97813 3.55435 3.58337 3.62783 3.66278 3.72654 3.77514 3.79389 3.89427 4.00767 4.09902 4.12790 4.22624 4.30827 4.34283 4.36517 4.44272 4.50396 4.51998 4.56461 4.58258 4.62058 4.65370 4.74997 4.76654 4.79445 4.93141 4.96298 5.00399 5.02165 5.06759 5.11811 5.13443 5.19766 5.25873 5.29126 5.32841 5.36090 5.46171 5.48804 5.51100 5.56313 5.62677 5.64538 6.00925 6.37759 6.59629 6.65398 7.33454 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.092 4.092 3 C -0.151 4.151 4 C -0.083 4.083 5 H 0.072 0.928 6 C -0.118 4.118 7 C -0.128 4.128 8 C 0.146 3.854 9 H 0.089 0.911 10 N -0.717 5.717 11 C 0.563 3.437 12 O -0.540 6.540 13 C -0.120 4.120 14 C -0.114 4.114 15 C -0.073 4.073 16 C -0.064 4.064 17 C -0.211 4.211 18 C -0.030 4.030 19 O -0.542 6.542 20 Si 0.685 3.315 21 C 0.076 3.924 22 N -0.584 5.584 23 C 0.082 3.918 24 C -0.057 4.057 25 C -0.131 4.131 26 C -0.115 4.115 27 H 0.054 0.946 28 H 0.053 0.947 29 H 0.057 0.943 30 H 0.068 0.932 31 H 0.057 0.943 32 H 0.053 0.947 33 H 0.054 0.946 34 H 0.058 0.942 35 H 0.071 0.929 36 H 0.070 0.930 37 H 0.080 0.920 38 H 0.399 0.601 39 H 0.124 0.876 40 H 0.129 0.871 41 H 0.111 0.889 42 H 0.377 0.623 43 H -0.256 1.256 44 H -0.254 1.254 45 H 0.179 0.821 46 H 0.422 0.578 47 H 0.136 0.864 48 H 0.072 0.928 49 H 0.068 0.932 50 H 0.061 0.939 51 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.301 -0.103 -2.037 2.419 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.110 4.110 3 C -0.208 4.208 4 C -0.101 4.101 5 H 0.090 0.910 6 C -0.155 4.155 7 C -0.166 4.166 8 C 0.042 3.958 9 H 0.107 0.893 10 N -0.370 5.370 11 C 0.351 3.649 12 O -0.418 6.418 13 C -0.125 4.125 14 C -0.133 4.133 15 C -0.091 4.091 16 C -0.069 4.069 17 C -0.219 4.219 18 C -0.141 4.141 19 O -0.347 6.347 20 Si 0.586 3.414 21 C -0.052 4.052 22 N -0.186 5.186 23 C -0.025 4.025 24 C -0.078 4.078 25 C -0.170 4.170 26 C -0.152 4.152 27 H 0.073 0.927 28 H 0.072 0.928 29 H 0.076 0.924 30 H 0.087 0.913 31 H 0.076 0.924 32 H 0.072 0.928 33 H 0.073 0.927 34 H 0.077 0.923 35 H 0.090 0.910 36 H 0.088 0.912 37 H 0.099 0.901 38 H 0.236 0.764 39 H 0.142 0.858 40 H 0.147 0.853 41 H 0.128 0.872 42 H 0.224 0.776 43 H -0.181 1.181 44 H -0.179 1.179 45 H 0.195 0.805 46 H 0.260 0.740 47 H 0.154 0.846 48 H 0.090 0.910 49 H 0.087 0.913 50 H 0.080 0.920 51 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 1.299 -1.013 -1.622 2.312 hybrid contribution -0.418 0.068 0.230 0.482 sum 0.880 -0.945 -1.393 1.900 Atomic orbital electron populations 1.21910 0.95254 1.01817 1.01798 1.21139 0.95697 0.96242 0.97965 1.21904 1.01227 0.95908 1.01752 1.21239 0.95279 0.95330 0.98257 0.90981 1.21665 1.01019 0.95381 0.97476 1.21846 0.93869 1.01398 0.99510 1.20966 0.93709 0.92719 0.88395 0.89330 1.46018 1.17568 1.56372 1.17090 1.18150 0.81396 0.78071 0.87318 1.90785 1.56311 1.60135 1.34533 1.19462 0.95342 1.03173 0.94493 1.20672 0.99430 1.00739 0.92504 1.20195 0.94179 0.96572 0.98176 1.19168 0.94638 1.00385 0.92727 1.20726 0.95606 1.08286 0.97257 1.24331 1.06367 0.95948 0.87473 1.86508 1.35027 1.44108 1.69055 0.95272 0.87900 0.77987 0.80226 1.21741 0.98720 1.00015 0.84739 1.41721 1.16043 1.47673 1.13204 1.18083 0.87976 1.00279 0.96122 1.20078 0.95312 0.96367 0.96085 1.21926 1.01384 0.94910 0.98732 1.21615 0.94902 1.00594 0.98118 0.92713 0.92787 0.92412 0.91341 0.92378 0.92795 0.92722 0.92313 0.91030 0.91169 0.90137 0.76397 0.85836 0.85275 0.87163 0.77587 1.18093 1.17898 0.80464 0.74018 0.84646 0.90953 0.91328 0.92002 0.91544 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.17 8.84 37.16 0.33 0.50 16 2 C -0.09 0.10 2.51 -90.62 -0.23 -0.13 16 3 C -0.15 0.11 8.84 37.16 0.33 0.44 16 4 C -0.08 0.11 1.77 -90.62 -0.16 -0.05 16 5 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 6 C -0.12 0.23 4.68 -26.73 -0.13 0.10 16 7 C -0.13 0.19 5.61 -26.73 -0.15 0.04 16 8 C 0.15 0.05 2.78 -67.93 -0.19 -0.14 16 9 H 0.09 0.18 7.58 -51.93 -0.39 -0.21 16 10 N -0.72 -0.38 4.18 -54.83 -0.23 -0.61 16 11 C 0.56 1.87 7.72 -12.45 -0.10 1.77 16 12 O -0.54 -3.63 15.98 5.28 0.08 -3.55 16 13 C -0.12 -0.29 5.87 -104.95 -0.62 -0.90 16 14 C -0.11 -0.09 9.46 -39.57 -0.37 -0.46 16 15 C -0.07 -0.10 10.03 -39.69 -0.40 -0.50 16 16 C -0.06 -0.13 6.35 -105.04 -0.67 -0.79 16 17 C -0.21 -0.02 5.57 -102.74 -0.57 -0.60 16 18 C -0.03 0.01 3.06 36.00 0.11 0.12 16 19 O -0.54 -0.10 12.88 -35.23 -0.45 -0.55 16 20 Si 0.68 -1.32 30.75 -169.99 -5.23 -6.54 16 21 C 0.08 -0.15 10.43 -16.78 -0.17 -0.32 16 22 N -0.58 0.73 6.07 -10.68 -0.06 0.67 16 23 C 0.08 0.13 7.26 -84.00 -0.61 -0.48 16 24 C -0.06 -0.14 9.61 -39.03 -0.37 -0.51 16 25 C -0.13 -0.05 5.60 -26.73 -0.15 -0.20 16 26 C -0.11 0.06 4.69 -26.73 -0.13 -0.07 16 27 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 29 H 0.06 -0.09 6.43 -51.93 -0.33 -0.42 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.06 -0.03 6.43 -51.93 -0.33 -0.37 16 32 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 33 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.06 -0.13 6.51 -51.93 -0.34 -0.47 16 35 H 0.07 -0.15 6.43 -51.93 -0.33 -0.48 16 36 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 37 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 38 H 0.40 -0.55 4.86 -40.82 -0.20 -0.75 16 39 H 0.12 -0.22 6.36 -52.49 -0.33 -0.55 16 40 H 0.13 0.04 8.06 -52.49 -0.42 -0.38 16 41 H 0.11 0.04 7.96 -51.93 -0.41 -0.38 16 42 H 0.38 -1.39 8.70 45.56 0.40 -1.00 16 43 H -0.26 -0.15 7.11 56.52 0.40 0.25 16 44 H -0.25 -0.42 7.11 56.52 0.40 -0.02 16 45 H 0.18 -1.01 6.35 -52.49 -0.33 -1.34 16 46 H 0.42 -1.68 8.96 -40.82 -0.37 -2.05 16 47 H 0.14 0.30 7.62 -52.49 -0.40 -0.10 16 48 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 49 H 0.07 0.17 8.14 -51.93 -0.42 -0.25 16 50 H 0.06 0.00 7.60 -51.93 -0.39 -0.39 16 51 H 0.07 -0.01 6.43 -51.93 -0.33 -0.35 16 LS Contribution 392.45 15.07 5.91 5.91 Total: 0.00 -8.27 392.45 -12.18 -20.45 By element: Atomic # 1 Polarization: -5.64 SS G_CDS: -7.96 Total: -13.60 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: -4.24 Total: -2.18 kcal Atomic # 7 Polarization: 0.35 SS G_CDS: -0.29 Total: 0.06 kcal Atomic # 8 Polarization: -3.73 SS G_CDS: -0.37 Total: -4.10 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: -5.23 Total: -6.54 kcal Total LS contribution 5.91 Total: 5.91 kcal Total: -8.27 -12.18 -20.45 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16623128_12335838.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.698 kcal (2) G-P(sol) polarization free energy of solvation -8.268 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.965 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.179 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.447 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.144 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds