Wall clock time and date at job start Tue Mar 9 2021 12:54:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38980 * 119.95195 * 2 1 4 4 O 1.35704 * 119.91304 * 0.02562 * 3 2 1 5 5 C 1.39011 * 120.17166 * 179.97438 * 3 2 1 6 6 C 1.50698 * 119.95791 * 180.02562 * 5 3 2 7 7 O 1.42903 * 109.47136 * 285.00379 * 6 5 3 8 8 Si 1.86298 * 109.47692 * 165.00067 * 6 5 3 9 9 C 1.37692 * 120.08899 * 359.76596 * 5 3 2 10 10 C 1.39746 * 119.90972 * 0.48512 * 9 5 3 11 11 C 1.47606 * 120.08820 * 179.76069 * 10 9 5 12 12 O 1.21585 * 119.99613 * 359.73473 * 11 10 9 13 13 N 1.34774 * 120.00183 * 179.72942 * 11 10 9 14 14 C 1.46496 * 120.00029 * 180.02562 * 13 11 10 15 15 H 1.09001 * 109.47062 * 324.99489 * 14 13 11 16 16 C 1.53000 * 109.47631 * 84.99851 * 14 13 11 17 17 C 1.53002 * 109.47233 * 59.99724 * 16 14 13 18 18 C 1.53006 * 109.46711 * 59.99999 * 17 16 14 19 19 H 1.09002 * 109.46589 * 60.00635 * 18 17 16 20 20 C 1.53002 * 109.46711 * 179.97438 * 18 17 16 21 21 C 1.53000 * 109.47233 * 300.00001 * 20 18 17 22 22 C 1.52997 * 109.46817 * 180.02562 * 20 18 17 23 23 C 1.52997 * 109.47445 * 300.00304 * 18 17 16 24 24 C 1.52997 * 109.46953 * 204.99984 * 14 13 11 25 25 C 1.37722 * 119.95491 * 179.97438 * 2 1 3 26 26 H 1.09002 * 109.47308 * 270.02076 * 1 2 3 27 27 H 1.09001 * 109.47379 * 30.01743 * 1 2 3 28 28 H 1.09005 * 109.47408 * 150.02408 * 1 2 3 29 29 H 0.96702 * 113.99993 * 90.00106 * 4 3 2 30 30 H 1.09006 * 109.46862 * 44.99716 * 6 5 3 31 31 H 0.96703 * 113.99812 * 299.99630 * 7 6 5 32 32 H 1.48497 * 110.00414 * 180.02562 * 8 6 5 33 33 H 1.48508 * 109.99879 * 301.32249 * 8 6 5 34 34 H 1.08004 * 120.04376 * 180.28033 * 9 5 3 35 35 H 0.97001 * 119.99990 * 359.97438 * 13 11 10 36 36 H 1.08992 * 109.47399 * 179.97438 * 16 14 13 37 37 H 1.09004 * 109.46724 * 300.00376 * 16 14 13 38 38 H 1.09002 * 109.47075 * 300.00932 * 17 16 14 39 39 H 1.08996 * 109.47407 * 179.97438 * 17 16 14 40 40 H 1.09002 * 109.47070 * 60.00376 * 20 18 17 41 41 H 1.09001 * 109.47194 * 179.97438 * 21 20 18 42 42 H 1.08992 * 109.47399 * 300.00166 * 21 20 18 43 43 H 1.09004 * 109.46724 * 60.00652 * 21 20 18 44 44 H 1.09002 * 109.47153 * 60.00231 * 22 20 18 45 45 H 1.08998 * 109.47533 * 179.97438 * 22 20 18 46 46 H 1.08996 * 109.47853 * 300.00202 * 22 20 18 47 47 H 1.09000 * 109.47140 * 180.02562 * 23 18 17 48 48 H 1.09002 * 109.47045 * 300.00058 * 23 18 17 49 49 H 1.09002 * 109.47153 * 179.97438 * 24 14 13 50 50 H 1.08996 * 109.47853 * 59.99808 * 24 14 13 51 51 H 1.08002 * 120.04193 * 359.97438 * 25 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2009 1.2042 0.0000 4 8 1.5196 2.3778 0.0005 5 6 3.5910 1.2095 0.0005 6 6 4.3385 2.5180 0.0011 7 8 4.2725 3.1049 -1.3001 8 14 6.1196 2.2157 0.4563 9 6 4.2859 0.0208 0.0059 10 6 3.5918 -1.1921 0.0006 11 6 4.3328 -2.4687 0.0011 12 8 5.5486 -2.4658 0.0012 13 7 3.6616 -3.6374 0.0014 14 6 4.3970 -4.9044 0.0024 15 1 5.3077 -4.7964 -0.5868 16 6 4.7613 -5.2817 1.4397 17 6 3.4831 -5.4333 2.2668 18 6 2.6086 -6.5310 1.6574 19 1 3.1558 -7.4737 1.6582 20 6 1.3307 -6.6831 2.4849 21 6 1.6955 -7.0607 3.9220 22 6 0.4565 -7.7812 1.8759 23 6 2.2444 -6.1539 0.2201 24 6 3.5226 -6.0021 -0.6069 25 6 2.1947 -1.1932 0.0005 26 1 -0.3634 0.0004 1.0277 27 1 -0.3634 0.8898 -0.5141 28 1 -0.3634 -0.8902 -0.5135 29 1 1.3225 2.7178 0.8841 30 1 3.8874 3.1938 0.7278 31 1 4.6564 2.5573 -1.9986 32 1 6.8675 3.4986 0.4610 33 1 6.2004 1.5763 1.7942 34 1 5.3659 0.0258 0.0109 35 1 2.6916 -3.6397 0.0018 36 1 5.3081 -6.2246 1.4405 37 1 5.3843 -4.4996 1.8738 38 1 2.9359 -4.4906 2.2661 39 1 3.7426 -5.7025 3.2907 40 1 0.7833 -5.7405 2.4846 41 1 0.7851 -7.1686 4.5116 42 1 2.2428 -8.0032 3.9222 43 1 2.3184 -6.2786 4.3561 44 1 1.0041 -8.7237 1.8765 45 1 -0.4537 -7.8899 2.4655 46 1 0.1966 -7.5128 0.8519 47 1 1.6210 -6.9357 -0.2139 48 1 1.6972 -5.2111 0.2194 49 1 4.0699 -6.9447 -0.6066 50 1 3.2631 -5.7335 -1.6309 51 1 1.6546 -2.1285 0.0014 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16623128_13287732.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:03 Heat of formation + Delta-G solvation = -109.021282 kcal Electronic energy + Delta-G solvation = -30180.935095 eV Core-core repulsion = 26238.720098 eV Total energy + Delta-G solvation = -3942.214997 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.198 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -41.84243 -40.99015 -39.59070 -37.82582 -37.50736 -36.66549 -34.15237 -33.80951 -32.03151 -31.79981 -29.73195 -28.13494 -28.10539 -26.87286 -25.08418 -23.85050 -23.46167 -22.14216 -21.70496 -20.94810 -20.23449 -19.57550 -18.88627 -18.04312 -17.28178 -16.89494 -16.80703 -16.43189 -16.08334 -15.89629 -15.54353 -15.38189 -15.21948 -14.97215 -14.84074 -14.66167 -14.50021 -14.37460 -14.22102 -14.06460 -13.93953 -13.47988 -13.35009 -13.20616 -13.17771 -13.03406 -12.82943 -12.70530 -12.33382 -12.29272 -12.14312 -12.13187 -11.99474 -11.82499 -11.64440 -11.44145 -11.08149 -10.93332 -10.89423 -10.40143 -10.09246 -9.99812 -9.67045 -4.97867 -0.39195 0.04097 1.27291 1.64996 1.70674 1.97893 2.09782 2.59572 3.02771 3.34538 3.52319 3.52490 3.55749 3.61217 3.66597 3.71384 3.92160 3.93838 4.03614 4.14449 4.14778 4.23648 4.26970 4.29440 4.40631 4.44321 4.48349 4.50360 4.54667 4.57274 4.58721 4.62916 4.70394 4.72295 4.86622 4.89981 4.94422 4.96842 4.99012 5.02796 5.05348 5.06688 5.09123 5.13212 5.21200 5.24747 5.25522 5.29091 5.43911 5.46873 5.49397 5.55289 6.46017 6.52653 6.59522 7.19907 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.117 4.117 3 C 0.159 3.841 4 O -0.483 6.483 5 C -0.152 4.152 6 C -0.055 4.055 7 O -0.531 6.531 8 Si 0.677 3.323 9 C -0.045 4.045 10 C -0.137 4.137 11 C 0.560 3.440 12 O -0.532 6.532 13 N -0.718 5.718 14 C 0.146 3.854 15 H 0.091 0.909 16 C -0.131 4.131 17 C -0.115 4.115 18 C -0.083 4.083 19 H 0.073 0.927 20 C -0.092 4.092 21 C -0.151 4.151 22 C -0.151 4.151 23 C -0.118 4.118 24 C -0.129 4.129 25 C -0.067 4.067 26 H 0.072 0.928 27 H 0.078 0.922 28 H 0.071 0.929 29 H 0.393 0.607 30 H 0.111 0.889 31 H 0.378 0.622 32 H -0.250 1.250 33 H -0.255 1.255 34 H 0.145 0.855 35 H 0.398 0.602 36 H 0.073 0.927 37 H 0.069 0.931 38 H 0.060 0.940 39 H 0.066 0.934 40 H 0.067 0.933 41 H 0.053 0.947 42 H 0.054 0.946 43 H 0.057 0.943 44 H 0.054 0.946 45 H 0.053 0.947 46 H 0.057 0.943 47 H 0.072 0.928 48 H 0.057 0.943 49 H 0.081 0.919 50 H 0.070 0.930 51 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.664 -3.741 0.465 5.256 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.118 4.118 3 C 0.113 3.887 4 O -0.294 6.294 5 C -0.153 4.153 6 C -0.166 4.166 7 O -0.336 6.336 8 Si 0.578 3.422 9 C -0.064 4.064 10 C -0.141 4.141 11 C 0.348 3.652 12 O -0.409 6.409 13 N -0.371 5.371 14 C 0.042 3.958 15 H 0.109 0.891 16 C -0.170 4.170 17 C -0.152 4.152 18 C -0.102 4.102 19 H 0.091 0.909 20 C -0.110 4.110 21 C -0.208 4.208 22 C -0.208 4.208 23 C -0.155 4.155 24 C -0.166 4.166 25 C -0.086 4.086 26 H 0.091 0.909 27 H 0.097 0.903 28 H 0.090 0.910 29 H 0.250 0.750 30 H 0.129 0.871 31 H 0.225 0.775 32 H -0.174 1.174 33 H -0.179 1.179 34 H 0.162 0.838 35 H 0.235 0.765 36 H 0.092 0.908 37 H 0.087 0.913 38 H 0.079 0.921 39 H 0.085 0.915 40 H 0.086 0.914 41 H 0.072 0.928 42 H 0.073 0.927 43 H 0.076 0.924 44 H 0.073 0.927 45 H 0.072 0.928 46 H 0.076 0.924 47 H 0.090 0.910 48 H 0.076 0.924 49 H 0.100 0.900 50 H 0.089 0.911 51 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -2.394 -3.161 0.767 4.039 hybrid contribution -1.193 0.115 0.740 1.409 sum -3.588 -3.047 1.507 4.942 Atomic orbital electron populations 1.20739 0.89746 1.03873 1.02775 1.20214 0.97299 0.92091 1.02151 1.18304 0.88811 0.85260 0.96290 1.84787 1.75631 1.35704 1.33256 1.20685 0.93929 0.96049 1.04588 1.24860 1.09334 0.92829 0.89551 1.86555 1.84544 1.46638 1.15892 0.94630 0.77366 0.83793 0.86422 1.20944 0.99977 0.90153 0.95300 1.19852 0.93444 0.93564 1.07190 1.18124 0.87270 0.83597 0.76233 1.90804 1.13201 1.87506 1.49427 1.46033 1.10317 1.05449 1.75276 1.20988 0.95628 0.82210 0.96955 0.89107 1.21931 0.97880 1.02174 0.95013 1.21620 0.95823 0.98580 0.99206 1.21247 0.95720 0.99071 0.94124 0.90903 1.21137 0.95781 0.99029 0.95052 1.21907 1.01443 1.01573 0.95905 1.21910 0.99521 0.98582 1.00791 1.21661 0.97106 1.01512 0.95230 1.21849 0.96715 0.98752 0.99331 1.21087 0.92635 0.97729 0.97105 0.90902 0.90347 0.91045 0.74984 0.87112 0.77500 1.17425 1.17906 0.83779 0.76539 0.90835 0.91272 0.92143 0.91516 0.91439 0.92795 0.92660 0.92409 0.92664 0.92787 0.92402 0.90981 0.92443 0.90049 0.91104 0.85186 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.24 9.78 36.01 0.35 0.59 16 2 C -0.12 0.05 5.89 -104.54 -0.62 -0.56 16 3 C 0.16 0.10 6.66 -39.02 -0.26 -0.16 16 4 O -0.48 -0.13 11.84 -18.82 -0.22 -0.35 16 5 C -0.15 -0.11 5.27 -104.54 -0.55 -0.66 16 6 C -0.05 -0.03 2.37 36.00 0.09 0.05 16 7 O -0.53 -0.81 12.88 -35.23 -0.45 -1.26 16 8 Si 0.68 0.24 29.91 -169.99 -5.08 -4.84 16 9 C -0.05 -0.05 8.20 -39.22 -0.32 -0.37 16 10 C -0.14 -0.11 5.87 -104.96 -0.62 -0.73 16 11 C 0.56 1.02 7.73 -12.44 -0.10 0.93 16 12 O -0.53 -2.74 16.00 5.29 0.08 -2.65 16 13 N -0.72 0.60 4.18 -54.83 -0.23 0.37 16 14 C 0.15 -0.12 2.78 -67.93 -0.19 -0.31 16 15 H 0.09 0.07 7.58 -51.93 -0.39 -0.32 16 16 C -0.13 0.08 5.60 -26.73 -0.15 -0.07 16 17 C -0.11 0.16 4.69 -26.73 -0.13 0.04 16 18 C -0.08 0.19 1.77 -90.62 -0.16 0.03 16 19 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 20 C -0.09 0.18 2.51 -90.62 -0.23 -0.05 16 21 C -0.15 0.21 8.84 37.16 0.33 0.54 16 22 C -0.15 0.29 8.84 37.16 0.33 0.61 16 23 C -0.12 0.35 4.68 -26.73 -0.13 0.22 16 24 C -0.13 0.32 5.61 -26.73 -0.15 0.17 16 25 C -0.07 0.06 9.18 -39.22 -0.36 -0.30 16 26 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 27 H 0.08 -0.10 7.52 -51.93 -0.39 -0.49 16 28 H 0.07 -0.21 8.08 -51.93 -0.42 -0.63 16 29 H 0.39 -1.54 9.06 45.56 0.41 -1.13 16 30 H 0.11 0.04 7.82 -51.93 -0.41 -0.37 16 31 H 0.38 -0.79 8.70 45.56 0.40 -0.39 16 32 H -0.25 -0.78 7.11 56.52 0.40 -0.38 16 33 H -0.25 -0.73 7.11 56.52 0.40 -0.33 16 34 H 0.15 0.09 4.69 -52.48 -0.25 -0.16 16 35 H 0.40 -1.13 4.89 -40.82 -0.20 -1.33 16 36 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 37 H 0.07 0.10 8.14 -51.93 -0.42 -0.32 16 38 H 0.06 -0.06 7.60 -51.93 -0.39 -0.46 16 39 H 0.07 -0.07 6.43 -51.93 -0.33 -0.40 16 40 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 41 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 42 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 43 H 0.06 -0.07 6.43 -51.93 -0.33 -0.41 16 44 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 45 H 0.05 -0.08 8.14 -51.93 -0.42 -0.51 16 46 H 0.06 -0.13 6.43 -51.93 -0.33 -0.46 16 47 H 0.07 -0.21 6.43 -51.93 -0.33 -0.55 16 48 H 0.06 -0.20 6.51 -51.93 -0.34 -0.54 16 49 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 50 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 51 H 0.13 -0.46 6.39 -52.49 -0.34 -0.79 16 LS Contribution 389.44 15.07 5.87 5.87 Total: 0.00 -7.42 389.44 -10.39 -17.81 By element: Atomic # 1 Polarization: -7.42 SS G_CDS: -7.50 Total: -14.92 kcal Atomic # 6 Polarization: 2.83 SS G_CDS: -2.85 Total: -0.02 kcal Atomic # 7 Polarization: 0.60 SS G_CDS: -0.23 Total: 0.37 kcal Atomic # 8 Polarization: -3.67 SS G_CDS: -0.59 Total: -4.27 kcal Atomic # 14 Polarization: 0.24 SS G_CDS: -5.08 Total: -4.84 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -7.42 -10.39 -17.81 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16623128_13287732.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.211 kcal (2) G-P(sol) polarization free energy of solvation -7.422 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.633 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.388 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.810 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.021 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds