Wall clock time and date at job start Tue Mar 9 2021 13:02:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86292 * 109.47111 * 2 1 4 4 C 1.50703 * 109.47172 * 119.99854 * 2 1 3 5 5 C 1.34244 * 126.50177 * 255.31963 * 4 2 1 6 6 N 1.36833 * 109.93748 * 180.16490 * 5 4 2 7 7 C 1.46492 * 125.05993 * 179.81135 * 6 5 4 8 8 C 1.50703 * 109.47441 * 264.69804 * 7 6 5 9 9 O 1.21283 * 119.99488 * 359.97438 * 8 7 6 10 10 N 1.34777 * 120.00290 * 180.02562 * 8 7 6 11 11 C 1.46498 * 119.99828 * 180.27728 * 10 8 7 12 12 H 1.08995 * 109.47013 * 324.72129 * 11 10 8 13 13 C 1.52999 * 109.47257 * 84.72116 * 11 10 8 14 14 C 1.52999 * 109.47156 * 59.99882 * 13 11 10 15 15 C 1.53004 * 109.47038 * 60.00078 * 14 13 11 16 16 H 1.08994 * 109.47168 * 59.99912 * 15 14 13 17 17 N 1.46500 * 109.46890 * 180.02562 * 15 14 13 18 18 O 1.21799 * 119.99919 * 239.99384 * 17 15 14 19 19 O 1.21794 * 120.00198 * 60.00132 * 17 15 14 20 20 C 1.52999 * 109.47083 * 299.99966 * 15 14 13 21 21 C 1.52999 * 109.47156 * 60.00106 * 20 15 14 22 22 C 1.37691 * 109.87438 * 359.54740 * 6 5 4 23 23 C 1.39083 * 133.51233 * 180.23413 * 22 6 5 24 24 C 1.37797 * 119.77813 * 180.02562 * 23 22 6 25 25 C 1.38792 * 120.66395 * 0.02562 * 24 23 22 26 26 C 1.36656 * 120.52721 * 359.97438 * 25 24 23 27 27 C 1.39593 * 119.76822 * 359.97438 * 26 25 24 28 28 H 0.96694 * 113.99741 * 299.99967 * 1 2 3 29 29 H 1.09000 * 109.47141 * 239.99656 * 2 1 3 30 30 H 1.48501 * 109.99965 * 178.68055 * 3 2 1 31 31 H 1.48506 * 109.99953 * 299.99601 * 3 2 1 32 32 H 1.08003 * 125.02535 * 0.02562 * 5 4 2 33 33 H 1.08998 * 109.47276 * 144.69720 * 7 6 5 34 34 H 1.09002 * 109.47526 * 24.70031 * 7 6 5 35 35 H 0.97001 * 119.99727 * 359.97438 * 10 8 7 36 36 H 1.09003 * 109.47054 * 179.97438 * 13 11 10 37 37 H 1.08996 * 109.47245 * 299.99926 * 13 11 10 38 38 H 1.08994 * 109.47213 * 300.00018 * 14 13 11 39 39 H 1.08998 * 109.47115 * 179.97438 * 14 13 11 40 40 H 1.09003 * 109.47054 * 300.00274 * 20 15 14 41 41 H 1.08996 * 109.47245 * 180.02562 * 20 15 14 42 42 H 1.08998 * 109.47115 * 180.02562 * 21 20 15 43 43 H 1.08994 * 109.47213 * 59.99982 * 21 20 15 44 44 H 1.07997 * 120.11360 * 0.05807 * 23 22 6 45 45 H 1.08000 * 119.66408 * 180.02562 * 24 23 22 46 46 H 1.07998 * 119.72905 * 180.02562 * 25 24 23 47 47 H 1.08005 * 120.11447 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.4554 -0.1372 2.3255 6 7 2.8028 -1.0989 3.2347 7 6 3.4075 -0.8402 4.5437 8 6 4.9058 -0.9626 4.4379 9 8 5.4180 -1.2391 3.3739 10 7 5.6765 -0.7657 5.5259 11 6 7.1334 -0.8786 5.4217 12 1 7.3869 -1.6636 4.7092 13 6 7.7152 0.4527 4.9421 14 6 7.3594 1.5545 5.9422 15 6 7.9434 1.2070 7.3131 16 1 9.0273 1.1229 7.2355 17 7 7.6021 2.2618 8.2708 18 8 8.4861 2.8828 8.8334 19 8 6.4345 2.5175 8.5047 20 6 7.3616 -0.1243 7.7926 21 6 7.7174 -1.2262 6.7925 22 6 2.4938 -2.3456 2.7385 23 6 2.6293 -3.6361 3.2392 24 6 2.2158 -4.7108 2.4823 25 6 1.6650 -4.5194 1.2228 26 6 1.5226 -3.2601 0.7116 27 6 1.9338 -2.1569 1.4616 28 1 -0.3932 0.4417 0.7650 29 1 1.7924 -0.5139 -0.8900 30 1 3.5346 1.7702 0.0321 31 1 1.5616 2.4678 -1.2086 32 1 2.5857 0.9256 2.4667 33 1 3.0339 -1.5657 5.2663 34 1 3.1474 0.1662 4.8717 35 1 5.2668 -0.5449 6.3770 36 1 8.7993 0.3687 4.8650 37 1 7.2992 0.7003 3.9656 38 1 6.2755 1.6386 6.0198 39 1 7.7742 2.5029 5.6008 40 1 6.2776 -0.0403 7.8701 41 1 7.7772 -0.3717 8.7694 42 1 7.3026 -2.1745 7.1339 43 1 8.8013 -1.3102 6.7150 44 1 3.0567 -3.7954 4.2182 45 1 2.3215 -5.7120 2.8731 46 1 1.3456 -5.3724 0.6427 47 1 1.0927 -3.1188 -0.2691 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16623254_9818708.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:02:03 Heat of formation + Delta-G solvation = -4.348512 kcal Electronic energy + Delta-G solvation = -32695.156118 eV Core-core repulsion = 28234.342875 eV Total energy + Delta-G solvation = -4460.813243 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -43.46659 -42.55695 -41.38104 -39.45802 -38.03049 -37.55677 -37.47457 -35.38651 -34.13927 -32.66684 -32.35598 -31.23458 -30.16494 -28.97526 -27.32187 -25.76178 -24.57388 -23.83695 -23.49453 -22.90843 -22.10504 -20.95619 -20.64157 -19.86225 -19.45453 -18.96817 -18.49757 -18.35887 -17.74969 -17.36947 -16.97174 -16.87702 -16.38774 -16.30736 -15.98003 -15.68561 -15.40056 -15.31650 -14.96678 -14.81221 -14.63846 -14.47746 -14.31219 -14.05156 -13.98403 -13.95375 -13.68227 -13.41686 -12.93584 -12.77409 -12.63358 -12.56829 -12.52839 -12.48885 -12.15548 -12.09325 -12.07535 -12.05022 -11.81068 -11.71992 -11.24298 -10.50225 -10.47565 -10.25808 -9.07483 -8.57972 -5.05573 -0.53309 0.22698 0.54354 0.73983 1.24048 1.31192 1.37598 1.61363 1.73680 1.96851 2.03392 2.62959 2.70606 3.05634 3.09602 3.17983 3.31556 3.35697 3.41935 3.55979 3.59112 3.61532 3.69240 3.71440 3.74861 3.80798 3.91999 3.98965 4.02147 4.26737 4.26889 4.31556 4.36912 4.41276 4.47820 4.53939 4.55260 4.66770 4.67991 4.74862 4.85452 4.93942 5.04690 5.20572 5.24790 5.59655 5.75716 5.81135 5.85206 5.98739 6.22635 6.30755 6.51738 6.72837 6.83477 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.029 4.029 3 Si 0.682 3.318 4 C -0.196 4.196 5 C 0.068 3.932 6 N -0.466 5.466 7 C 0.091 3.909 8 C 0.493 3.507 9 O -0.510 6.510 10 N -0.726 5.726 11 C 0.142 3.858 12 H 0.103 0.897 13 C -0.126 4.126 14 C -0.122 4.122 15 C 0.017 3.983 16 H 0.137 0.863 17 N -0.018 5.018 18 O -0.162 6.162 19 O -0.157 6.157 20 C -0.126 4.126 21 C -0.122 4.122 22 C 0.109 3.891 23 C -0.128 4.128 24 C -0.096 4.096 25 C -0.145 4.145 26 C -0.065 4.065 27 C -0.087 4.087 28 H 0.376 0.624 29 H 0.111 0.889 30 H -0.257 1.257 31 H -0.254 1.254 32 H 0.171 0.829 33 H 0.119 0.881 34 H 0.125 0.875 35 H 0.402 0.598 36 H 0.084 0.916 37 H 0.088 0.912 38 H 0.091 0.909 39 H 0.083 0.917 40 H 0.089 0.911 41 H 0.088 0.912 42 H 0.092 0.908 43 H 0.092 0.908 44 H 0.114 0.886 45 H 0.125 0.875 46 H 0.123 0.877 47 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.423 -0.943 4.651 4.765 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.140 4.140 3 Si 0.584 3.416 4 C -0.204 4.204 5 C -0.057 4.057 6 N -0.150 5.150 7 C -0.035 4.035 8 C 0.277 3.723 9 O -0.384 6.384 10 N -0.382 5.382 11 C 0.037 3.963 12 H 0.120 0.880 13 C -0.165 4.165 14 C -0.160 4.160 15 C -0.081 4.081 16 H 0.155 0.845 17 N 0.505 4.495 18 O -0.381 6.381 19 O -0.378 6.378 20 C -0.164 4.164 21 C -0.160 4.160 22 C 0.005 3.995 23 C -0.149 4.149 24 C -0.116 4.116 25 C -0.165 4.165 26 C -0.084 4.084 27 C -0.091 4.091 28 H 0.223 0.777 29 H 0.128 0.872 30 H -0.181 1.181 31 H -0.179 1.179 32 H 0.188 0.812 33 H 0.137 0.863 34 H 0.143 0.857 35 H 0.238 0.762 36 H 0.103 0.897 37 H 0.107 0.893 38 H 0.109 0.891 39 H 0.102 0.898 40 H 0.108 0.892 41 H 0.107 0.893 42 H 0.110 0.890 43 H 0.110 0.890 44 H 0.132 0.868 45 H 0.143 0.857 46 H 0.141 0.859 47 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 1.712 -1.336 2.654 3.429 hybrid contribution 0.141 -0.233 0.639 0.694 sum 1.853 -1.569 3.293 4.091 Atomic orbital electron populations 1.86505 1.17472 1.81757 1.48929 1.24328 0.84662 1.08729 0.96292 0.95401 0.80890 0.77552 0.87801 1.20644 1.10010 0.92373 0.97351 1.21507 1.01037 0.93812 0.89294 1.43175 1.52569 1.04653 1.14571 1.21590 0.90516 1.06063 0.85371 1.21077 0.89632 0.77197 0.84392 1.90826 1.74630 1.45290 1.27623 1.46112 1.06888 1.72860 1.12297 1.21021 0.79380 0.98177 0.97680 0.87951 1.21935 1.02273 0.93311 0.99023 1.21867 1.03062 1.00870 0.90226 1.24377 1.05284 0.87955 0.90477 0.84505 1.44891 1.00769 1.02368 1.01505 1.94607 1.42057 1.50505 1.50882 1.94540 1.04038 1.71361 1.67852 1.21899 1.02832 0.90818 1.00858 1.21834 1.02968 0.98262 0.92955 1.18154 1.01207 0.85835 0.94350 1.19944 1.05101 0.89254 1.00589 1.20831 0.98318 0.97944 0.94472 1.20675 1.02409 0.96948 0.96419 1.20316 0.97942 0.90955 0.99188 1.18947 1.03371 0.92825 0.93938 0.77692 0.87177 1.18136 1.17862 0.81214 0.86346 0.85724 0.76243 0.89721 0.89314 0.89059 0.89837 0.89225 0.89332 0.88955 0.88991 0.86783 0.85726 0.85915 0.85957 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.72 12.88 -35.23 -0.45 -1.17 16 2 C -0.03 -0.03 3.06 36.01 0.11 0.08 16 3 Si 0.68 -0.33 30.76 -169.99 -5.23 -5.55 16 4 C -0.20 -0.38 5.57 -102.71 -0.57 -0.95 16 5 C 0.07 0.00 9.89 -16.73 -0.17 -0.17 16 6 N -0.47 -0.14 2.27 -115.71 -0.26 -0.40 16 7 C 0.09 -0.33 6.48 -5.20 -0.03 -0.36 16 8 C 0.49 -0.85 7.86 -10.98 -0.09 -0.93 16 9 O -0.51 -1.72 16.09 5.55 0.09 -1.63 16 10 N -0.73 3.43 4.23 -53.81 -0.23 3.20 16 11 C 0.14 -0.62 2.78 -67.93 -0.19 -0.81 16 12 H 0.10 -0.25 7.58 -51.93 -0.39 -0.64 16 13 C -0.13 0.52 5.60 -26.73 -0.15 0.37 16 14 C -0.12 0.48 5.15 -26.73 -0.14 0.34 16 15 C 0.02 -0.06 2.88 -67.93 -0.20 -0.26 16 16 H 0.14 -0.63 8.09 -51.93 -0.42 -1.05 16 17 N -0.02 -0.01 3.82 -4.89 -0.02 -0.03 16 18 O -0.16 -0.47 19.21 -29.46 -0.57 -1.04 16 19 O -0.16 -0.27 18.50 -29.46 -0.55 -0.81 16 20 C -0.13 0.67 5.13 -26.73 -0.14 0.53 16 21 C -0.12 0.75 5.61 -26.73 -0.15 0.60 16 22 C 0.11 0.30 6.80 -83.99 -0.57 -0.27 16 23 C -0.13 -0.25 10.00 -39.43 -0.39 -0.64 16 24 C -0.10 -0.17 10.01 -39.54 -0.40 -0.57 16 25 C -0.15 -0.34 9.97 -39.95 -0.40 -0.74 16 26 C -0.07 -0.23 10.05 -39.65 -0.40 -0.62 16 27 C -0.09 -0.33 6.35 -105.14 -0.67 -0.99 16 28 H 0.38 -1.04 8.70 45.56 0.40 -0.65 16 29 H 0.11 0.24 7.96 -51.93 -0.41 -0.17 16 30 H -0.26 -0.64 7.11 56.52 0.40 -0.23 16 31 H -0.25 -0.69 7.11 56.52 0.40 -0.29 16 32 H 0.17 -0.60 6.35 -52.48 -0.33 -0.93 16 33 H 0.12 -0.66 8.14 -51.93 -0.42 -1.09 16 34 H 0.12 -0.85 8.12 -51.93 -0.42 -1.28 16 35 H 0.40 -2.82 6.87 -40.82 -0.28 -3.10 16 36 H 0.08 -0.42 8.14 -51.93 -0.42 -0.84 16 37 H 0.09 -0.18 8.14 -51.93 -0.42 -0.60 16 38 H 0.09 -0.36 7.49 -51.93 -0.39 -0.74 16 39 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 40 H 0.09 -0.52 6.39 -51.93 -0.33 -0.85 16 41 H 0.09 -0.44 8.14 -51.93 -0.42 -0.86 16 42 H 0.09 -0.59 8.14 -51.93 -0.42 -1.02 16 43 H 0.09 -0.62 8.14 -51.93 -0.42 -1.04 16 44 H 0.11 -0.02 8.06 -52.49 -0.42 -0.44 16 45 H 0.12 -0.05 8.06 -52.49 -0.42 -0.47 16 46 H 0.12 0.06 8.06 -52.49 -0.42 -0.36 16 47 H 0.12 0.32 8.06 -52.48 -0.42 -0.10 16 LS Contribution 391.93 15.07 5.91 5.91 Total: 0.00 -12.10 391.93 -12.27 -24.37 By element: Atomic # 1 Polarization: -11.02 SS G_CDS: -6.43 Total: -17.45 kcal Atomic # 6 Polarization: -0.86 SS G_CDS: -4.53 Total: -5.39 kcal Atomic # 7 Polarization: 3.28 SS G_CDS: -0.51 Total: 2.77 kcal Atomic # 8 Polarization: -3.18 SS G_CDS: -1.48 Total: -4.65 kcal Atomic # 14 Polarization: -0.33 SS G_CDS: -5.23 Total: -5.55 kcal Total LS contribution 5.91 Total: 5.91 kcal Total: -12.10 -12.27 -24.37 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16623254_9818708.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.021 kcal (2) G-P(sol) polarization free energy of solvation -12.096 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 7.926 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.274 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.370 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.349 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds