Wall clock time and date at job start Tue Mar 9 2021 13:05:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86302 * 109.46966 * 2 1 4 4 C 1.50699 * 109.46957 * 119.99227 * 2 1 3 5 5 C 1.34851 * 125.89537 * 244.97477 * 4 2 1 6 6 C 1.40890 * 107.41811 * 180.02562 * 5 4 2 7 7 C 1.34850 * 107.41611 * 0.02562 * 6 5 4 8 8 C 1.50711 * 125.88642 * 179.97438 * 7 6 5 9 9 C 1.50701 * 109.46839 * 85.02609 * 8 7 6 10 10 O 1.21283 * 120.00052 * 359.97438 * 9 8 7 11 11 N 1.34770 * 119.99922 * 179.97438 * 9 8 7 12 12 C 1.46500 * 120.00256 * 180.02562 * 11 9 8 13 13 H 1.08998 * 109.46845 * 325.00694 * 12 11 9 14 14 C 1.53006 * 109.47249 * 84.99846 * 12 11 9 15 15 C 1.52997 * 109.47164 * 180.02562 * 14 12 11 16 16 C 1.53002 * 109.46978 * 299.99874 * 15 14 12 17 17 H 1.08992 * 109.47056 * 300.00064 * 16 15 14 18 18 C 1.50701 * 109.46958 * 180.02562 * 16 15 14 19 19 N 1.30522 * 126.34675 * 145.02858 * 18 16 15 20 20 N 1.28594 * 109.67407 * 179.97438 * 19 18 16 21 21 C 1.30523 * 109.67479 * 359.97438 * 20 19 18 22 22 N 1.35491 * 126.34604 * 324.71593 * 18 16 15 23 23 C 1.52996 * 109.46891 * 60.00410 * 16 15 14 24 24 C 1.52997 * 109.47473 * 205.00145 * 12 11 9 25 25 N 1.36336 * 108.22126 * 0.26255 * 7 6 5 26 26 H 0.96696 * 114.00021 * 299.99886 * 1 2 3 27 27 H 1.08995 * 109.47401 * 239.99761 * 2 1 3 28 28 H 1.48496 * 109.99985 * 178.68146 * 3 2 1 29 29 H 1.48502 * 109.99711 * 299.99854 * 3 2 1 30 30 H 1.07998 * 126.29105 * 0.02562 * 5 4 2 31 31 H 1.08000 * 126.29232 * 179.97438 * 6 5 4 32 32 H 1.08991 * 109.47128 * 325.02632 * 8 7 6 33 33 H 1.09000 * 109.46620 * 205.02312 * 8 7 6 34 34 H 0.97005 * 120.00370 * 0.02562 * 11 9 8 35 35 H 1.09001 * 109.47002 * 60.00085 * 14 12 11 36 36 H 1.09000 * 109.47050 * 300.00351 * 14 12 11 37 37 H 1.09002 * 109.47045 * 180.02562 * 15 14 12 38 38 H 1.09001 * 109.47375 * 59.99966 * 15 14 12 39 39 H 1.07990 * 126.34833 * 180.02562 * 21 20 19 40 40 H 0.97003 * 126.98437 * 0.03516 * 22 18 16 41 41 H 1.09004 * 109.47368 * 179.97438 * 23 16 15 42 42 H 1.09001 * 109.47372 * 59.99964 * 23 16 15 43 43 H 1.09002 * 109.47153 * 59.99757 * 24 12 11 44 44 H 1.09001 * 109.46832 * 299.99948 * 24 12 11 45 45 H 0.97001 * 125.63545 * 179.74389 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7102 1.2306 5 6 2.6306 -0.1486 2.2376 6 6 2.8984 -1.1604 3.1807 7 6 2.3531 -2.3019 2.7138 8 6 2.3945 -3.6447 3.3970 9 6 1.2629 -3.7393 4.3877 10 8 0.4984 -2.8079 4.5259 11 7 1.1004 -4.8588 5.1202 12 6 0.0000 -4.9510 6.0830 13 1 -0.1726 -3.9730 6.5322 14 6 -1.2692 -5.4130 5.3641 15 6 -2.4186 -5.5087 6.3695 16 6 -2.0568 -6.5155 7.4633 17 1 -1.8845 -7.4935 7.0143 18 6 -3.1892 -6.6102 8.4532 19 7 -3.5730 -7.6835 9.0891 20 7 -4.5676 -7.4012 9.8538 21 6 -4.8631 -6.1349 9.7411 22 7 -3.9936 -5.5957 8.8525 23 6 -0.7877 -6.0534 8.1821 24 6 0.3620 -5.9580 7.1765 25 7 1.7636 -2.0333 1.5142 26 1 -0.3933 0.4417 0.7650 27 1 1.7924 -0.5138 -0.8899 28 1 3.5346 1.7704 0.0321 29 1 1.5615 2.4678 -1.2085 30 1 2.9302 0.8866 2.3082 31 1 3.4414 -1.0434 4.1070 32 1 3.3447 -3.7577 3.9188 33 1 2.2926 -4.4343 2.6525 34 1 1.7120 -5.6036 5.0100 35 1 -1.0967 -6.3910 4.9148 36 1 -1.5272 -4.6956 4.5851 37 1 -3.3227 -5.8383 5.8574 38 1 -2.5910 -4.5306 6.8185 39 1 -5.6517 -5.6128 10.2622 40 1 -3.9561 -4.6715 8.5603 41 1 -0.5302 -6.7704 8.9618 42 1 -0.9601 -5.0753 8.6312 43 1 1.2662 -5.6288 7.6886 44 1 0.5345 -6.9359 6.7271 45 1 1.2988 -2.6764 0.9563 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16624780_14644196.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:18 Heat of formation + Delta-G solvation = 43.643278 kcal Electronic energy + Delta-G solvation = -27813.281587 eV Core-core repulsion = 23833.750508 eV Total energy + Delta-G solvation = -3979.531079 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.164 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -44.12781 -42.32244 -41.02663 -39.32428 -37.66827 -35.73949 -34.57956 -33.37524 -32.23712 -32.09169 -31.88110 -30.00639 -28.92161 -25.45069 -24.58204 -24.16668 -23.36368 -22.28540 -21.72210 -21.34348 -21.23628 -20.83520 -19.38262 -18.94212 -18.17896 -17.62753 -16.85312 -16.81766 -16.47208 -16.40945 -16.27288 -15.92205 -15.47303 -15.23689 -15.12689 -14.89196 -14.63607 -14.38700 -14.14163 -14.04552 -13.90842 -13.80284 -13.55147 -13.46045 -12.88547 -12.78697 -12.52219 -12.45049 -12.33956 -12.03290 -11.92386 -11.85553 -11.81638 -11.61478 -11.31388 -10.89614 -10.60942 -10.19886 -10.15423 -9.74187 -8.92789 -4.96785 0.80876 1.13122 1.27444 1.58217 1.69193 1.76257 1.89003 1.92060 1.94626 2.23213 2.47843 3.06662 3.34591 3.45298 3.46332 3.59607 3.67776 3.77542 3.82455 3.86691 3.93540 3.97578 4.01012 4.13032 4.16674 4.19183 4.31444 4.33244 4.39320 4.45600 4.48268 4.56283 4.60408 4.79137 4.79983 4.82271 4.86655 4.88553 5.04634 5.10449 5.12809 5.29334 5.32933 5.37351 6.03060 6.03324 6.17404 6.36997 6.53705 6.63432 7.16319 7.75485 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.050 4.050 3 Si 0.719 3.281 4 C -0.010 4.010 5 C -0.187 4.187 6 C -0.173 4.173 7 C 0.036 3.964 8 C -0.073 4.073 9 C 0.513 3.487 10 O -0.522 6.522 11 N -0.730 5.730 12 C 0.144 3.856 13 H 0.090 0.910 14 C -0.127 4.127 15 C -0.115 4.115 16 C -0.003 4.003 17 H 0.110 0.890 18 C 0.186 3.814 19 N -0.291 5.291 20 N -0.296 5.296 21 C 0.154 3.846 22 N -0.581 5.581 23 C -0.107 4.107 24 C -0.125 4.125 25 N -0.536 5.536 26 H 0.382 0.618 27 H 0.109 0.891 28 H -0.255 1.255 29 H -0.256 1.256 30 H 0.142 0.858 31 H 0.136 0.864 32 H 0.117 0.883 33 H 0.099 0.901 34 H 0.401 0.599 35 H 0.070 0.930 36 H 0.073 0.927 37 H 0.074 0.926 38 H 0.065 0.935 39 H 0.223 0.777 40 H 0.429 0.571 41 H 0.080 0.920 42 H 0.067 0.933 43 H 0.077 0.923 44 H 0.075 0.925 45 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.448 1.843 0.069 3.065 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.160 4.160 3 Si 0.619 3.381 4 C -0.124 4.124 5 C -0.212 4.212 6 C -0.198 4.198 7 C -0.078 4.078 8 C -0.114 4.114 9 C 0.298 3.702 10 O -0.396 6.396 11 N -0.382 5.382 12 C 0.040 3.960 13 H 0.108 0.892 14 C -0.165 4.165 15 C -0.153 4.153 16 C -0.024 4.024 17 H 0.128 0.872 18 C -0.083 4.083 19 N -0.132 5.132 20 N -0.135 5.135 21 C -0.135 4.135 22 N -0.194 5.194 23 C -0.146 4.146 24 C -0.163 4.163 25 N -0.130 5.130 26 H 0.230 0.770 27 H 0.126 0.874 28 H -0.179 1.179 29 H -0.181 1.181 30 H 0.159 0.841 31 H 0.154 0.846 32 H 0.135 0.865 33 H 0.117 0.883 34 H 0.236 0.764 35 H 0.089 0.911 36 H 0.092 0.908 37 H 0.092 0.908 38 H 0.083 0.917 39 H 0.239 0.761 40 H 0.269 0.731 41 H 0.099 0.901 42 H 0.085 0.915 43 H 0.096 0.904 44 H 0.094 0.906 45 H 0.248 0.752 Dipole moment (debyes) X Y Z Total from point charges 2.302 1.105 -0.372 2.580 hybrid contribution 0.016 0.432 -0.848 0.952 sum 2.317 1.538 -1.220 3.037 Atomic orbital electron populations 1.86470 1.17324 1.81870 1.49534 1.24823 0.85025 1.10679 0.95473 0.93998 0.80902 0.76614 0.86599 1.20844 1.07178 0.84368 0.99993 1.20645 1.05553 0.99501 0.95496 1.20584 1.06572 0.91703 1.00911 1.19473 1.03733 0.95854 0.88732 1.20143 0.99293 0.94409 0.97521 1.20591 0.85986 0.82164 0.81427 1.90761 1.45178 1.37322 1.66350 1.46068 1.32317 1.18139 1.41722 1.21009 0.85953 1.00352 0.88697 0.89239 1.21887 0.93988 1.02407 0.98256 1.21598 0.99135 0.98549 0.96058 1.19778 0.88971 1.02231 0.91402 0.87210 1.24859 0.97306 0.84820 1.01365 1.74304 1.08540 1.22695 1.07616 1.74307 1.09774 1.11623 1.17816 1.26591 0.98186 0.92857 0.95858 1.44140 1.26825 1.13380 1.35034 1.21539 0.92748 1.02329 0.97977 1.21812 0.98790 0.99650 0.96085 1.41800 1.44309 1.09083 1.17835 0.76976 0.87385 1.17904 1.18065 0.84085 0.84602 0.86494 0.88272 0.76446 0.91083 0.90821 0.90761 0.91678 0.76098 0.73117 0.90145 0.91458 0.90431 0.90603 0.75161 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.46 12.88 -35.23 -0.45 -0.91 16 2 C -0.05 -0.01 3.08 36.01 0.11 0.10 16 3 Si 0.72 -0.54 30.60 -169.99 -5.20 -5.74 16 4 C -0.01 -0.01 6.50 -81.79 -0.53 -0.54 16 5 C -0.19 -0.27 9.37 -39.78 -0.37 -0.64 16 6 C -0.17 -0.29 10.76 -39.78 -0.43 -0.72 16 7 C 0.04 0.02 5.66 -81.79 -0.46 -0.44 16 8 C -0.07 0.18 6.24 -29.03 -0.18 0.00 16 9 C 0.51 -0.27 7.79 -10.99 -0.09 -0.35 16 10 O -0.52 -2.03 15.70 5.55 0.09 -1.95 16 11 N -0.73 2.33 5.08 -53.81 -0.27 2.05 16 12 C 0.14 -0.39 2.45 -67.93 -0.17 -0.56 16 13 H 0.09 -0.06 7.58 -51.93 -0.39 -0.46 16 14 C -0.13 0.33 5.49 -26.73 -0.15 0.18 16 15 C -0.11 0.35 4.98 -26.73 -0.13 0.21 16 16 C 0.00 0.01 2.66 -91.77 -0.24 -0.24 16 17 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 18 C 0.19 0.11 6.99 -154.99 -1.08 -0.98 16 19 N -0.29 -1.36 12.21 32.80 0.40 -0.96 16 20 N -0.30 -1.36 12.21 29.69 0.36 -1.00 16 21 C 0.15 -0.02 13.19 -89.94 -1.19 -1.21 16 22 N -0.58 1.00 5.96 -11.36 -0.07 0.93 16 23 C -0.11 0.32 5.19 -26.71 -0.14 0.18 16 24 C -0.13 0.51 5.39 -26.71 -0.14 0.36 16 25 N -0.54 -0.39 6.07 -5.43 -0.03 -0.42 16 26 H 0.38 -0.89 8.70 45.56 0.40 -0.49 16 27 H 0.11 0.03 7.96 -51.93 -0.41 -0.38 16 28 H -0.25 -0.42 7.11 56.52 0.40 -0.01 16 29 H -0.26 -0.54 7.11 56.52 0.40 -0.14 16 30 H 0.14 -0.06 6.24 -52.49 -0.33 -0.38 16 31 H 0.14 0.07 8.06 -52.49 -0.42 -0.35 16 32 H 0.12 -0.53 8.14 -51.93 -0.42 -0.95 16 33 H 0.10 -0.46 8.14 -51.93 -0.42 -0.88 16 34 H 0.40 -2.34 8.60 -40.82 -0.35 -2.69 16 35 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 36 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 37 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 38 H 0.06 -0.23 7.52 -51.93 -0.39 -0.62 16 39 H 0.22 -0.99 8.06 -52.49 -0.42 -1.41 16 40 H 0.43 -2.15 8.29 -40.82 -0.34 -2.49 16 41 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 42 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 43 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 44 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 45 H 0.41 -0.35 8.96 -40.82 -0.37 -0.72 16 LS Contribution 372.06 15.07 5.61 5.61 Total: 0.00 -12.86 372.06 -11.22 -24.08 By element: Atomic # 1 Polarization: -10.60 SS G_CDS: -6.45 Total: -17.06 kcal Atomic # 6 Polarization: 0.55 SS G_CDS: -5.19 Total: -4.64 kcal Atomic # 7 Polarization: 0.22 SS G_CDS: 0.39 Total: 0.61 kcal Atomic # 8 Polarization: -2.49 SS G_CDS: -0.37 Total: -2.86 kcal Atomic # 14 Polarization: -0.54 SS G_CDS: -5.20 Total: -5.74 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -12.86 -11.22 -24.08 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_14644196.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.725 kcal (2) G-P(sol) polarization free energy of solvation -12.862 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.863 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.220 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.082 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.643 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds