Wall clock time and date at job start Tue Mar 9 2021 13:06:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35994 * 116.99970 * 2 1 4 4 C 1.39154 * 120.07418 * 179.97438 * 3 2 1 5 5 O 1.35988 * 120.07176 * 0.02562 * 4 3 2 6 6 C 1.42898 * 117.00116 * 180.02562 * 5 4 3 7 7 C 1.50697 * 109.47428 * 180.02562 * 6 5 4 8 8 O 1.21278 * 119.99879 * 359.97438 * 7 6 5 9 9 N 1.34777 * 119.99981 * 180.02562 * 7 6 5 10 10 C 1.46505 * 119.99797 * 179.97438 * 9 7 6 11 11 H 1.08992 * 109.47276 * 325.00066 * 10 9 7 12 12 C 1.53002 * 109.46958 * 84.99979 * 10 9 7 13 13 C 1.52997 * 109.46978 * 180.02562 * 12 10 9 14 14 C 1.53006 * 109.47164 * 299.99874 * 13 12 10 15 15 H 1.08998 * 109.46505 * 299.99708 * 14 13 12 16 16 C 1.50697 * 109.47239 * 180.02562 * 14 13 12 17 17 N 1.30524 * 126.34822 * 144.68724 * 16 14 13 18 18 N 1.28592 * 109.67143 * 179.82050 * 17 16 14 19 19 C 1.30525 * 109.67603 * 0.44953 * 18 17 16 20 20 N 1.35492 * 107.30732 * 359.73083 * 19 18 17 21 21 C 1.52997 * 109.47127 * 59.99836 * 14 13 12 22 22 C 1.52996 * 109.46998 * 204.99519 * 10 9 7 23 23 C 1.38565 * 119.85418 * 180.29283 * 4 3 2 24 24 C 1.38247 * 119.99518 * 359.42887 * 23 4 3 25 25 C 1.38253 * 120.14821 * 0.59581 * 24 23 4 26 26 C 1.50702 * 119.92501 * 179.69792 * 25 24 23 27 27 O 1.42899 * 109.47405 * 244.97874 * 26 25 24 28 28 Si 1.86293 * 109.47414 * 4.98045 * 26 25 24 29 29 C 1.38241 * 120.14722 * 359.67785 * 25 24 23 30 30 H 1.09000 * 109.47122 * 300.00084 * 1 2 3 31 31 H 1.08998 * 109.47075 * 60.00454 * 1 2 3 32 32 H 1.09002 * 109.47131 * 180.02562 * 1 2 3 33 33 H 1.08998 * 109.47253 * 59.99634 * 6 5 4 34 34 H 1.09005 * 109.47090 * 299.99990 * 6 5 4 35 35 H 0.97001 * 120.00457 * 359.97438 * 9 7 6 36 36 H 1.09002 * 109.47097 * 299.99818 * 12 10 9 37 37 H 1.09001 * 109.47142 * 59.99782 * 12 10 9 38 38 H 1.09001 * 109.47375 * 59.99908 * 13 12 10 39 39 H 1.09000 * 109.47140 * 179.97438 * 13 12 10 40 40 H 1.07997 * 126.34919 * 179.72460 * 19 18 17 41 41 H 0.96997 * 126.98709 * 180.02562 * 20 19 18 42 42 H 1.09002 * 109.47153 * 180.02562 * 21 14 13 43 43 H 1.09001 * 109.46832 * 60.00321 * 21 14 13 44 44 H 1.09004 * 109.47368 * 60.00227 * 22 10 9 45 45 H 1.09001 * 109.47372 * 300.00383 * 22 10 9 46 46 H 1.07993 * 120.00092 * 179.70461 * 23 4 3 47 47 H 1.07998 * 119.92359 * 180.29320 * 24 23 4 48 48 H 1.09005 * 109.46874 * 124.97857 * 26 25 24 49 49 H 0.96699 * 113.99729 * 59.99886 * 27 26 25 50 50 H 1.48493 * 110.00223 * 179.97438 * 28 26 25 51 51 H 1.48502 * 110.00151 * 301.32077 * 28 26 25 52 52 H 1.08000 * 119.99978 * 180.02562 * 29 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2864 0.0005 5 8 4.1795 0.1478 0.0005 6 6 5.6003 0.3007 0.0017 7 6 6.2519 -1.0581 0.0009 8 8 5.5670 -2.0590 -0.0001 9 7 7.5957 -1.1610 0.0022 10 6 8.2291 -2.4821 0.0020 11 1 7.6266 -3.1740 0.5903 12 6 8.3378 -2.9953 -1.4353 13 6 8.9987 -4.3751 -1.4354 14 6 10.3974 -4.2708 -0.8240 15 1 11.0003 -3.5791 -1.4124 16 6 11.0487 -5.6298 -0.8248 17 7 12.3159 -5.8802 -1.0118 18 7 12.5214 -7.1478 -0.9432 19 6 11.3931 -7.7644 -0.7188 20 7 10.4262 -6.8187 -0.6373 21 6 10.2888 -3.7575 0.6132 22 6 9.6278 -2.3770 0.6131 23 6 4.0603 2.5234 0.0067 24 6 3.3028 3.6799 0.0003 25 6 1.9223 3.6057 0.0003 26 6 1.1015 4.8696 0.0002 27 8 0.3641 4.9589 1.2210 28 14 2.2307 6.3434 -0.1523 29 6 1.2931 2.3748 -0.0002 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3633 -1.0277 0.0005 33 1 5.9059 0.8501 0.8921 34 1 5.9072 0.8510 -0.8879 35 1 8.1435 -0.3605 0.0034 36 1 7.3413 -3.0701 -1.8707 37 1 8.9404 -2.3033 -2.0236 38 1 8.3958 -5.0669 -0.8472 39 1 9.0757 -4.7410 -2.4593 40 1 11.2556 -8.8307 -0.6170 41 1 9.4806 -6.9632 -0.4768 42 1 11.2853 -3.6827 1.0486 43 1 9.6859 -4.4493 1.2014 44 1 9.5505 -2.0114 1.6370 45 1 10.2304 -1.6850 0.0248 46 1 5.1385 2.5840 0.0119 47 1 3.7907 4.6434 0.0003 48 1 0.4096 4.8534 -0.8419 49 1 0.9171 4.9778 2.0140 50 1 1.4334 7.5962 -0.1541 51 1 3.1999 6.3593 0.9728 52 1 0.2145 2.3196 -0.0006 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16624780_60476.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:06:49 Heat of formation + Delta-G solvation = -38.298635 kcal Electronic energy + Delta-G solvation = -35266.842094 eV Core-core repulsion = 30428.055515 eV Total energy + Delta-G solvation = -4838.786579 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.183 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -44.14753 -41.82400 -41.10089 -39.73339 -39.05654 -38.81392 -37.02221 -35.75094 -34.58610 -32.66917 -31.97638 -31.86917 -31.45190 -30.26325 -28.78486 -28.36513 -26.20778 -24.75360 -24.09169 -23.55980 -23.21752 -22.55773 -22.11600 -21.55028 -20.89222 -19.78916 -19.30386 -18.65675 -18.34524 -17.98577 -17.49780 -17.28360 -17.08496 -16.84065 -16.66794 -16.38022 -16.13729 -16.08338 -15.82095 -15.80433 -15.53393 -15.31954 -15.06939 -14.86397 -14.66348 -14.33784 -14.07638 -13.78518 -13.74500 -13.52242 -13.42865 -13.27377 -12.84654 -12.62661 -12.58517 -12.40854 -12.28590 -12.19376 -12.15588 -12.13534 -11.98939 -11.84093 -11.66632 -11.62141 -11.51531 -11.29732 -10.91928 -10.60995 -10.25605 -10.12515 -9.78370 -8.91612 -4.88222 0.17197 0.28319 0.85599 1.33515 1.49100 1.50792 1.63210 1.84604 1.89710 1.99765 2.31020 2.55805 2.58598 3.16988 3.41211 3.49950 3.61130 3.66090 3.67118 3.85991 3.87218 3.91629 3.98621 4.06344 4.10593 4.15100 4.16324 4.21640 4.28734 4.30571 4.32799 4.33449 4.36360 4.40554 4.43944 4.50911 4.57248 4.64748 4.66019 4.66932 4.80201 5.01038 5.01380 5.01520 5.04858 5.09138 5.13093 5.16842 5.26823 5.30133 5.37590 5.47046 5.59899 5.97597 6.22707 6.44504 6.49383 6.56190 7.18323 7.70247 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.334 6.334 3 C 0.077 3.923 4 C 0.086 3.914 5 O -0.314 6.314 6 C 0.032 3.968 7 C 0.513 3.487 8 O -0.571 6.571 9 N -0.705 5.705 10 C 0.146 3.854 11 H 0.068 0.932 12 C -0.122 4.122 13 C -0.108 4.108 14 C 0.004 3.996 15 H 0.111 0.889 16 C 0.191 3.809 17 N -0.341 5.341 18 N -0.354 5.354 19 C 0.168 3.832 20 N -0.570 5.570 21 C -0.103 4.103 22 C -0.114 4.114 23 C -0.159 4.159 24 C -0.111 4.111 25 C -0.116 4.116 26 C -0.085 4.085 27 O -0.550 6.550 28 Si 0.776 3.224 29 C -0.152 4.152 30 H 0.061 0.939 31 H 0.066 0.934 32 H 0.111 0.889 33 H 0.125 0.875 34 H 0.129 0.871 35 H 0.422 0.578 36 H 0.053 0.947 37 H 0.085 0.915 38 H 0.070 0.930 39 H 0.072 0.928 40 H 0.261 0.739 41 H 0.445 0.555 42 H 0.073 0.927 43 H 0.067 0.933 44 H 0.084 0.916 45 H 0.094 0.906 46 H 0.176 0.824 47 H 0.157 0.843 48 H 0.122 0.878 49 H 0.386 0.614 50 H -0.307 1.307 51 H -0.274 1.274 52 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.256 4.649 -0.383 4.671 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.249 6.249 3 C 0.031 3.969 4 C 0.041 3.959 5 O -0.227 6.227 6 C -0.045 4.045 7 C 0.300 3.700 8 O -0.449 6.449 9 N -0.359 5.359 10 C 0.042 3.958 11 H 0.087 0.913 12 C -0.161 4.161 13 C -0.147 4.147 14 C -0.017 4.017 15 H 0.129 0.871 16 C -0.080 4.080 17 N -0.181 5.181 18 N -0.193 5.193 19 C -0.122 4.122 20 N -0.184 5.184 21 C -0.142 4.142 22 C -0.152 4.152 23 C -0.178 4.178 24 C -0.129 4.129 25 C -0.117 4.117 26 C -0.193 4.193 27 O -0.359 6.359 28 Si 0.681 3.319 29 C -0.171 4.171 30 H 0.080 0.920 31 H 0.084 0.916 32 H 0.129 0.871 33 H 0.143 0.857 34 H 0.146 0.854 35 H 0.260 0.740 36 H 0.072 0.928 37 H 0.104 0.896 38 H 0.089 0.911 39 H 0.091 0.909 40 H 0.276 0.724 41 H 0.288 0.712 42 H 0.092 0.908 43 H 0.085 0.915 44 H 0.103 0.897 45 H 0.113 0.887 46 H 0.193 0.807 47 H 0.174 0.826 48 H 0.139 0.861 49 H 0.235 0.765 50 H -0.236 1.236 51 H -0.200 1.200 52 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 1.220 4.473 -0.707 4.690 hybrid contribution -2.253 -0.671 1.434 2.753 sum -1.032 3.802 0.727 4.006 Atomic orbital electron populations 1.23279 0.76850 1.05194 1.02072 1.86186 1.22952 1.26631 1.89097 1.18665 0.89934 0.85578 1.02698 1.18582 0.88180 0.86565 1.02611 1.86218 1.18290 1.28969 1.89250 1.22805 0.79295 0.95470 1.06973 1.20511 0.83140 0.90714 0.75685 1.90767 1.64111 1.40051 1.49965 1.45731 1.05026 1.10424 1.74756 1.21011 0.94172 0.84056 0.96555 0.91333 1.21829 1.00820 0.96691 0.96771 1.21536 0.93567 0.98019 1.01582 1.19827 0.95806 0.86825 0.99243 0.87089 1.25245 0.90081 0.90934 1.01764 1.74184 1.14559 1.08551 1.20799 1.74191 1.24959 0.99923 1.20203 1.27285 0.83809 0.99536 1.01573 1.44110 1.13578 1.06251 1.54482 1.21495 1.01778 0.96922 0.94011 1.21741 0.93345 0.97433 1.02684 1.21376 1.02252 0.89312 1.04834 1.21045 0.92448 0.99123 1.00291 1.20108 0.94430 0.94688 1.02429 1.25305 1.02198 1.02259 0.89550 1.86572 1.37384 1.95597 1.16319 0.93969 0.77315 0.72423 0.88227 1.21022 1.00499 0.90574 1.04998 0.92014 0.91584 0.87087 0.85724 0.85392 0.74004 0.92840 0.89592 0.91128 0.90927 0.72375 0.71210 0.90801 0.91469 0.89707 0.88703 0.80690 0.82572 0.86065 0.76464 1.23588 1.19980 0.84154 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.03 9.81 113.37 1.11 1.15 16 2 O -0.33 -3.36 10.28 -79.62 -0.82 -4.18 16 3 C 0.08 0.54 6.70 22.57 0.15 0.69 16 4 C 0.09 0.37 6.70 22.57 0.15 0.52 16 5 O -0.31 -2.17 9.45 -67.00 -0.63 -2.80 16 6 C 0.03 -0.14 5.22 71.23 0.37 0.23 16 7 C 0.51 0.43 7.87 87.66 0.69 1.12 16 8 O -0.57 -7.35 16.16 16.01 0.26 -7.09 16 9 N -0.71 5.13 5.08 -442.54 -2.25 2.88 16 10 C 0.15 -0.85 2.45 44.99 0.11 -0.74 16 11 H 0.07 -0.03 7.58 -2.39 -0.02 -0.05 16 12 C -0.12 0.65 5.49 30.59 0.17 0.82 16 13 C -0.11 0.67 4.97 30.60 0.15 0.82 16 14 C 0.00 -0.02 2.66 -11.54 -0.03 -0.05 16 15 H 0.11 -0.51 8.14 -2.39 -0.02 -0.53 16 16 C 0.19 0.27 6.99 137.97 0.96 1.23 16 17 N -0.34 -3.55 12.21 -50.15 -0.61 -4.16 16 18 N -0.35 -3.62 12.21 -59.99 -0.73 -4.35 16 19 C 0.17 -0.08 13.19 180.11 2.37 2.30 16 20 N -0.57 2.10 5.96 -189.85 -1.13 0.97 16 21 C -0.10 0.68 5.19 30.61 0.16 0.84 16 22 C -0.11 1.12 5.39 30.61 0.17 1.28 16 23 C -0.16 0.58 9.04 22.35 0.20 0.78 16 24 C -0.11 0.45 8.66 22.28 0.19 0.64 16 25 C -0.12 0.08 5.35 -19.86 -0.11 -0.03 16 26 C -0.08 0.16 2.80 71.24 0.20 0.36 16 27 O -0.55 -0.88 12.83 -148.98 -1.91 -2.79 16 28 Si 0.78 -3.49 29.88 68.60 2.05 -1.44 16 29 C -0.15 -0.45 8.67 22.35 0.19 -0.26 16 30 H 0.06 -0.01 7.66 -2.39 -0.02 -0.03 16 31 H 0.07 -0.06 7.66 -2.39 -0.02 -0.08 16 32 H 0.11 -0.12 8.14 -2.39 -0.02 -0.14 16 33 H 0.13 -1.37 7.65 -2.39 -0.02 -1.39 16 34 H 0.13 -1.46 7.67 -2.38 -0.02 -1.48 16 35 H 0.42 -6.33 8.60 -92.71 -0.80 -7.13 16 36 H 0.05 0.01 8.14 -2.39 -0.02 -0.01 16 37 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 38 H 0.07 -0.50 7.52 -2.39 -0.02 -0.52 16 39 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 40 H 0.26 -2.65 8.06 -2.91 -0.02 -2.68 16 41 H 0.44 -4.74 8.29 -92.71 -0.77 -5.50 16 42 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 43 H 0.07 -0.43 8.14 -2.39 -0.02 -0.45 16 44 H 0.08 -0.88 8.14 -2.39 -0.02 -0.90 16 45 H 0.09 -1.20 8.14 -2.39 -0.02 -1.22 16 46 H 0.18 -2.08 6.30 -2.91 -0.02 -2.10 16 47 H 0.16 -1.44 4.83 -2.91 -0.01 -1.45 16 48 H 0.12 -0.37 7.96 -2.38 -0.02 -0.39 16 49 H 0.39 -1.56 8.70 -74.06 -0.64 -2.20 16 50 H -0.31 -1.23 7.11 99.48 0.71 -0.52 16 51 H -0.27 0.58 7.01 99.48 0.70 1.27 16 52 H 0.14 0.22 6.30 -2.91 -0.02 0.20 16 Total: 0.00 -40.25 423.40 0.26 -39.99 By element: Atomic # 1 Polarization: -27.55 SS G_CDS: -1.18 Total: -28.74 kcal Atomic # 6 Polarization: 4.50 SS G_CDS: 7.22 Total: 11.72 kcal Atomic # 7 Polarization: 0.06 SS G_CDS: -4.72 Total: -4.66 kcal Atomic # 8 Polarization: -13.76 SS G_CDS: -3.11 Total: -16.87 kcal Atomic # 14 Polarization: -3.49 SS G_CDS: 2.05 Total: -1.44 kcal Total: -40.25 0.26 -39.99 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16624780_60476.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.689 kcal (2) G-P(sol) polarization free energy of solvation -40.247 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.558 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.259 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.988 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.299 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds